Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d025827_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:10:131080707:131091159:1 gene:Zm00001d025827 gene_biotype:protein_coding transcript_biotype:protein_coding description:triglyceride lipases;triglyceride lipases
Sequence

ATGGCCTCGATCAGTGCTCCCGCAGTAGCATGCCGCGTCGCGCCGGCGCGCGCAACAACC
TCGGTTCTTCCCGCGCACTCGCGGCGGCCGGGATGCAGGTCGGTGGTGTGGCGGTGCTGG
GCCGCGACGAGGGGGAGACGGAGGCGGTGGGCAGGGCTGCGGGCAAGGTGCCGCATAAGC
TGCGACGTCAGCCAGCCGTCAGCCGTGCAGCCAGATTCTGAGAGCTCTGGGGAGGGATTG
GTGGCGCAGGACGACGGGCCGCGGCGGCCGCCATTCGACATCAACCTCGCCGTCGTGCTC
GCCGGGTTCGCGTTTGAAGCCTATACCAGTCCTCCGGCAGATGTGGGCTGGCGCGAAACT
GATGCGGCTGACTGTCAGACAGTGTTCCTGTCCGATGTGTTTCTTCGTGAAGTATACGAT
GGACGGCTTGTCGTCAGGCTGAAGAAAGGCATAAACCTTCCTGCAATGGATCCATGGGGT
ACTAGTGATCCTTATGTAATTCTACAACTGAATGGCCAAACTGCAAAAAGCCAAATTAAA
TGGGCGACAAAGGAGCCAACATGGAATGAAGATTTCACGTTTAACATTAGAAAATCTCGT
GAAAATCTTCTGCAGGTTGCAGCTTGGGATGCAAACCTTGTTACCCCACACAAACGCATG
GGAAATGCTGGATTATACCTTGAATCATTTTGTGATGGTAACAATCATGGTGTTACTGTT
GAATTAGAAGGCCTCGGTGGTGGTGGAACTATAGAGATAGAGGTCAAATATAAGAGTTAT
GACGATATCGAGCGTGAAAAACAATGGTGGAGAATACCTTTCGTGTCTGACTTTCTTGTG
AAGAGCAGCCTGGGATCTGCTCTTAGGATGGTTCTTGGATCTGAAAGTATAAATGCTAGT
CAGTTTGTGAAGTCTGCATTTGGGCAACTGAGTTCTTTCACATACACCTATCTTCCAAAG
CCATCATCATTGGAAAGTGGAGTTGATGTTTCTAAAAGTGATGAAGAATCCTCAGATGGC
CCAACTAATTCAAATGAGCTTCAACAACAGAATATTGATTCTGAAATCATTTCAGATTCT
CATTCTCATAGTGAAGTTCAATCTCCTACTGCTGTTGTTAATAGTGAAGGAAATTCATCG
TCTGATATGAAGAAATCAGATGAATATTTTTGGAGAGCTCTGAACAATGTACTAAACCAA
AATGTACTACAGAACTTTGGATTTTCTCTCCCGGAGGTCAAGCAATTGGGTGGTTTTGAC
CTATTAAGTTCACTTGGTCTGAAATCACGCAATATTGCTGAACAGGAATATCTAGAATCT
GGACTTGCAATGGCAGATACTTCAACAAATGGTGGCAGTGAAACAACTTCTGAAAATACA
GTTGGTGTTGAGAATGAAAATAGAACATTGACAACCAAAGAGGAGGTGCAATCTTCCTTT
CCAGATATAAATAAAGTATCTCGGGATGTATTGTCTCAAACAGAAAATATACTCGGAGCT
CTGATGATACTTTCCAAAAATCTCTCACCACATGATCAGTCAGTACCGACAACTGGAACA
AATGGGAAATATGACATGATTAGAGAAGAGCAAGGTGCTTCAGCTGCAGATTCTGTTCAA
AAGGCTGATACTGTTTCATCTGCGTTACTGTCCATTGATGCACAGGAAGCAGAGGATATG
CGGCGCTTGTTTGCAAGTGCAGAGACTGCCATGGAGGCATGGGCTATGCTTGCCACTTCA
CTGGGACGTAACAGTTTCATCAAGTCGGACTTTGAAAAGATATGTTTTCTTGACAATATT
TCAACAGACACACAAGTTGCCATATGGTGCGATTCTTCTCGAAGAAGGTTGGTTGTTGCC
TTTCGTGGAACCGAACAATCAAGGTGGAAGGATTTGCGAACCGACTTAATGCTTGTACCT
GCTGGACTAAACCCTGAGAGGCTAGGTGGTGACTTCAAACAAGAAGTTCAAGTTCACAGT
GGATTCTTAGGTGCATATGACTCTGTTAGGAACAGGATCATGACTCTCATCAAATATGCC
ATTGGATACGATGATGAAGAAGATGCAGAAAACATACCTAGGTGGCATGTTTATGTGACT
GGACACAGTTTAGGTGGAGCACTAGCGACTCTTCTTGCTCTTGAACTTTCATCAAGTCAA
ATGGCCAAGTAG

Peptide Sequence

PEP ID

Zm00001d025827_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:10:131080707:131091159:1 gene:Zm00001d025827 transcript:Zm00001d025827_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:triglyceride lipases;triglyceride lipases
Sequence

MASISAPAVACRVAPARATTSVLPAHSRRPGCRSVVWRCWAATRGRRRRWAGLRARCRIS
CDVSQPSAVQPDSESSGEGLVAQDDGPRRPPFDINLAVVLAGFAFEAYTSPPADVGWRET
DAADCQTVFLSDVFLREVYDGRLVVRLKKGINLPAMDPWGTSDPYVILQLNGQTAKSQIK
WATKEPTWNEDFTFNIRKSRENLLQVAAWDANLVTPHKRMGNAGLYLESFCDGNNHGVTV
ELEGLGGGGTIEIEVKYKSYDDIEREKQWWRIPFVSDFLVKSSLGSALRMVLGSESINAS
QFVKSAFGQLSSFTYTYLPKPSSLESGVDVSKSDEESSDGPTNSNELQQQNIDSEIISDS
HSHSEVQSPTAVVNSEGNSSSDMKKSDEYFWRALNNVLNQNVLQNFGFSLPEVKQLGGFD
LLSSLGLKSRNIAEQEYLESGLAMADTSTNGGSETTSENTVGVENENRTLTTKEEVQSSF
PDINKVSRDVLSQTENILGALMILSKNLSPHDQSVPTTGTNGKYDMIREEQGASAADSVQ
KADTVSSALLSIDAQEAEDMRRLFASAETAMEAWAMLATSLGRNSFIKSDFEKICFLDNI
STDTQVAIWCDSSRRRLVVAFRGTEQSRWKDLRTDLMLVPAGLNPERLGGDFKQEVQVHS
GFLGAYDSVRNRIMTLIKYAIGYDDEEDAENIPRWHVYVTGHSLGGALATLLALELSSSQ
MAK

Transcript Sequence

Transcript ID

Zm00001d025827_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:131080707:131091159:1 gene:Zm00001d025827 gene_biotype:protein_coding transcript_biotype:protein_coding description:triglyceride lipases;triglyceride lipases
Sequence

CTCTCGAACAGACGAGCGGCGAGCGCTTCTCCTCGCTAGAAGCGACAGCGAAGTGAACAT
AACCAAAACGACGGCAATCGCCGAGTCCATATGGCCTCGATCAGTGCTCCCGCAGTAGCA
TGCCGCGTCGCGCCGGCGCGCGCAACAACCTCGGTTCTTCCCGCGCACTCGCGGCGGCCG
GGATGCAGGTCGGTGGTGTGGCGGTGCTGGGCCGCGACGAGGGGGAGACGGAGGCGGTGG
GCAGGGCTGCGGGCAAGGTGCCGCATAAGCTGCGACGTCAGCCAGCCGTCAGCCGTGCAG
CCAGATTCTGAGAGCTCTGGGGAGGGATTGGTGGCGCAGGACGACGGGCCGCGGCGGCCG
CCATTCGACATCAACCTCGCCGTCGTGCTCGCCGGGTTCGCGTTTGAAGCCTATACCAGT
CCTCCGGCAGATGTGGGCTGGCGCGAAACTGATGCGGCTGACTGTCAGACAGTGTTCCTG
TCCGATGTGTTTCTTCGTGAAGTATACGATGGACGGCTTGTCGTCAGGCTGAAGAAAGGC
ATAAACCTTCCTGCAATGGATCCATGGGGTACTAGTGATCCTTATGTAATTCTACAACTG
AATGGCCAAACTGCAAAAAGCCAAATTAAATGGGCGACAAAGGAGCCAACATGGAATGAA
GATTTCACGTTTAACATTAGAAAATCTCGTGAAAATCTTCTGCAGGTTGCAGCTTGGGAT
GCAAACCTTGTTACCCCACACAAACGCATGGGAAATGCTGGATTATACCTTGAATCATTT
TGTGATGGTAACAATCATGGTGTTACTGTTGAATTAGAAGGCCTCGGTGGTGGTGGAACT
ATAGAGATAGAGGTCAAATATAAGAGTTATGACGATATCGAGCGTGAAAAACAATGGTGG
AGAATACCTTTCGTGTCTGACTTTCTTGTGAAGAGCAGCCTGGGATCTGCTCTTAGGATG
GTTCTTGGATCTGAAAGTATAAATGCTAGTCAGTTTGTGAAGTCTGCATTTGGGCAACTG
AGTTCTTTCACATACACCTATCTTCCAAAGCCATCATCATTGGAAAGTGGAGTTGATGTT
TCTAAAAGTGATGAAGAATCCTCAGATGGCCCAACTAATTCAAATGAGCTTCAACAACAG
AATATTGATTCTGAAATCATTTCAGATTCTCATTCTCATAGTGAAGTTCAATCTCCTACT
GCTGTTGTTAATAGTGAAGGAAATTCATCGTCTGATATGAAGAAATCAGATGAATATTTT
TGGAGAGCTCTGAACAATGTACTAAACCAAAATGTACTACAGAACTTTGGATTTTCTCTC
CCGGAGGTCAAGCAATTGGGTGGTTTTGACCTATTAAGTTCACTTGGTCTGAAATCACGC
AATATTGCTGAACAGGAATATCTAGAATCTGGACTTGCAATGGCAGATACTTCAACAAAT
GGTGGCAGTGAAACAACTTCTGAAAATACAGTTGGTGTTGAGAATGAAAATAGAACATTG
ACAACCAAAGAGGAGGTGCAATCTTCCTTTCCAGATATAAATAAAGTATCTCGGGATGTA
TTGTCTCAAACAGAAAATATACTCGGAGCTCTGATGATACTTTCCAAAAATCTCTCACCA
CATGATCAGTCAGTACCGACAACTGGAACAAATGGGAAATATGACATGATTAGAGAAGAG
CAAGGTGCTTCAGCTGCAGATTCTGTTCAAAAGGCTGATACTGTTTCATCTGCGTTACTG
TCCATTGATGCACAGGAAGCAGAGGATATGCGGCGCTTGTTTGCAAGTGCAGAGACTGCC
ATGGAGGCATGGGCTATGCTTGCCACTTCACTGGGACGTAACAGTTTCATCAAGTCGGAC
TTTGAAAAGATATGTTTTCTTGACAATATTTCAACAGACACACAAGTTGCCATATGGTGC
GATTCTTCTCGAAGAAGGTTGGTTGTTGCCTTTCGTGGAACCGAACAATCAAGGTGGAAG
GATTTGCGAACCGACTTAATGCTTGTACCTGCTGGACTAAACCCTGAGAGGCTAGGTGGT
GACTTCAAACAAGAAGTTCAAGTTCACAGTGGATTCTTAGGTGCATATGACTCTGTTAGG
AACAGGATCATGACTCTCATCAAATATGCCATTGGATACGATGATGAAGAAGATGCAGAA
AACATACCTAGGTGGCATGTTTATGTGACTGGACACAGTTTAGGTGGAGCACTAGCGACT
CTTCTTGCTCTTGAACTTTCATCAAGTCAAATGGCCAAGTAGGTTTGAACTTTTACTTGA
TCTAAATCTGCAATCTTCTTATTTCAGACATCATTTGGTTCACTGTTTGTGGAAACAGGT
AAAAGTCAAACATTTAACATGTAGGCAACCCAAACAAGATCAGTTTAACTTGGATGACTT
TTTATTAACTGCTCTTTTTTTCGAACAGCAGAGGAGAGGTGTGTGTCATTTTCTGTGGCA
TGTCTTTTTTAATCTCGAACACGTGGGAGAACCACATATCATTATATTAAAAAGTCAGGA
AAAAGGTCTAGAAAAGACCCAATACAAGGTGCCTAGAAAGCACCC