Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d025780_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:10:129424865:129428134:1 gene:Zm00001d025780 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 21
Sequence	ATGTCACTTGCTGTACCTGTGACACTAAAGACTACTCAGAGCGGTGAGAATGAAAGACTT GAATACGCCGTGTCAGCTATGCAAGGATACCGTTTAAATATGGAGGATGCTCATGCAATT GTCCTGAATCTTGATGCTGCAACTGGCACATCATTCTTTGGTGTTTATGATGGCCATGGA GGACCTGCTGTTTCAAAGTATTGTGCGAGACACCTACACGCTGAGCTTCGCCGACATGAA AGTTTTCGGGATAATCTCCAGACTGCAATTGAGAGAACGTTCTTAAGGATGGATGAGATG ATGAGAGACAGGAGGGCAGGGAGGGAATTATCTGGGTACGGTGGTAATGACAATTGGAAA GCATATAGAAAGGCTATCAACATGAGTCTATTTCTACCCTTCTGTCAGAAGCCAGCTTAT CAGGGGCCAGTAATGGATGGATGTACCGCGTGTGTGGTTCTCATTAGAGACAACCGAATC ATTGTGGGAAATGCTGGTGATTCTCGTTGTGTACTCTCAAGGAATAATCAGGCGATTGAT CTATCCACCGATTTTAAACCAAACCTTCCAGACGAAAGACAAAGAATAGAAGCTGCAGGA CATGTGGTAACTTTTAGCGAGAGAGGAAATGTGCATCGTATTGATGATGGAATTGCGGTT TCGAGATCACTTGGTGACCTAATGTACAAGGATAATAATGATTTAGGTCCCGTACAACAA GCAATTACTGCCTTTCCTGAAGTTCGCACTGAAGAGATAACTCAAGATGACCAGTTTCTT ATTATAGCATGTGATGGAATCTGGGATTGCCTAACAAGCCAGCAAGCAGTTGATTTTATA AGGATATACTCATTTGCTGACGTAGGGCTGGCGTCCATCTGCGAGGCCCTCCTTGCTCAC TGCGTGGCACAACCTAGAGGGAGGGACAACATGACTGTCATACTGGTTCGGTTCAAGACG CCAGGCGCTTGCCAAGTTAGGGCCAGCAACGTACCGCCACCGCCGATCCGCCAAGATGCT GCTGCGAGCCAAGCTGCTGGGAGCCAAGCTGCTGCTGCGAGCCAAGCCGCTGGGAGCCAA GCTGCTGCCGGCCACTAG

Peptide Sequence

PEP ID	Zm00001d025780_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:10:129424865:129428134:1 gene:Zm00001d025780 transcript:Zm00001d025780_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 21
Sequence	MSLAVPVTLKTTQSGENERLEYAVSAMQGYRLNMEDAHAIVLNLDAATGTSFFGVYDGHG GPAVSKYCARHLHAELRRHESFRDNLQTAIERTFLRMDEMMRDRRAGRELSGYGGNDNWK AYRKAINMSLFLPFCQKPAYQGPVMDGCTACVVLIRDNRIIVGNAGDSRCVLSRNNQAID LSTDFKPNLPDERQRIEAAGHVVTFSERGNVHRIDDGIAVSRSLGDLMYKDNNDLGPVQQ AITAFPEVRTEEITQDDQFLIIACDGIWDCLTSQQAVDFIRIYSFADVGLASICEALLAH CVAQPRGRDNMTVILVRFKTPGACQVRASNVPPPPIRQDAAASQAAGSQAAAASQAAGSQ AAAGH

Transcript Sequence

Transcript ID	Zm00001d025780_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:10:129424865:129428134:1 gene:Zm00001d025780 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 21
Sequence	AGGATATTTTACTCACACTAGTACGCAACAGGATATTACACAATGTCACTTGCTGTACCT GTGACACTAAAGACTACTCAGAGCGGTGAGAATGAAAGACTTGAATACGCCGTGTCAGCT ATGCAAGGATACCGTTTAAATATGGAGGATGCTCATGCAATTGTCCTGAATCTTGATGCT GCAACTGGCACATCATTCTTTGGTGTTTATGATGGCCATGGAGGACCTGCTGTTTCAAAG TATTGTGCGAGACACCTACACGCTGAGCTTCGCCGACATGAAAGTTTTCGGGATAATCTC CAGACTGCAATTGAGAGAACGTTCTTAAGGATGGATGAGATGATGAGAGACAGGAGGGCA GGGAGGGAATTATCTGGGTACGGTGGTAATGACAATTGGAAAGCATATAGAAAGGCTATC AACATGAGTCTATTTCTACCCTTCTGTCAGAAGCCAGCTTATCAGGGGCCAGTAATGGAT GGATGTACCGCGTGTGTGGTTCTCATTAGAGACAACCGAATCATTGTGGGAAATGCTGGT GATTCTCGTTGTGTACTCTCAAGGAATAATCAGGCGATTGATCTATCCACCGATTTTAAA CCAAACCTTCCAGACGAAAGACAAAGAATAGAAGCTGCAGGACATGTGGTAACTTTTAGC GAGAGAGGAAATGTGCATCGTATTGATGATGGAATTGCGGTTTCGAGATCACTTGGTGAC CTAATGTACAAGGATAATAATGATTTAGGTCCCGTACAACAAGCAATTACTGCCTTTCCT GAAGTTCGCACTGAAGAGATAACTCAAGATGACCAGTTTCTTATTATAGCATGTGATGGA ATCTGGGATTGCCTAACAAGCCAGCAAGCAGTTGATTTTATAAGGATATACTCATTTGCT GACGTAGGGCTGGCGTCCATCTGCGAGGCCCTCCTTGCTCACTGCGTGGCACAACCTAGA GGGAGGGACAACATGACTGTCATACTGGTTCGGTTCAAGACGCCAGGCGCTTGCCAAGTT AGGGCCAGCAACGTACCGCCACCGCCGATCCGCCAAGATGCTGCTGCGAGCCAAGCTGCT GGGAGCCAAGCTGCTGCTGCGAGCCAAGCCGCTGGGAGCCAAGCTGCTGCCGGCCACTAG AACTTCCGCACCGCCCACCCCCAGCTGGGTTTATGATGGCAATGTTCACCCTCGCCCCAC ACGCGGACCCAAGACCAGAAGCCCCCAGAGCTCCAAGAGCCTCAGAGCTTTGAGTTCGTT TTTTGTCAGGAAAAGATGAGGTTGCTTACCCTGGTTCTTTCACGTGGTGTGCATCTTATC CCCCCGTAGACTTTGGGTTCATTTTACCAGGACAAGATAAACTTGATTTTGTTTTGCGTA GGATGATTTCCTGTGAGAAGAGTAGCTTGTCGTTCTAGGCACTGACGATGGAGTTTTTTT TTCCCCTGTGAGTCATATGTTTGGATTACCACATCAATATTCTTGTTTTCCGCGGTTTGG AGGATACGTATTTGCTCTGCCTTAACATCGAATGCTTCACATACATCAGATTGCAATACC TTACAATGTGCTTGTCATTGCATATTTGTTTCAA