Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d025739_T034
CDS Infomation

cds chromosome:B73_RefGen_v4:10:128024034:128027521:-1 gene:Zm00001d025739 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCGCTGGGCGCCATGGGGGTTACAGGGACTACGAGGCGAGGGAGCGGGAGCTCGAC
GCGGAGGCCTCCAGGAGGAGCAAGGAGCAGCACCACCATCTCGGCGGCCGCCACCGCGAC
GTGGACCGCCACCGCGATGGCGGGCGCAGCAGGGGTGGCAGAGACTTTGCCAACGGCTAC
GGTCGCCGACGCTCGCCGCCACCCCGGAGCCGGCTGGCGGGAAGGCTTGGTGACCGTGAG
CCTGGCGAGGTGCTGAGCGGTAGTGCATCTGATGACTCCGGTGGGAGGCCGCATAGAGGG
AGGGAGAATGGCGTGCTCAGTTCCGGCAGGGAGGGTGATGTGATGGCAGTCACTGATGAC
TCCGGTGGGAGGTCGCATAGGAGGAGGGAGAATGGCGTGCTCAGTTCCGGCAGGGATGGT
GATGTGATGGCAGTCACAGGGATATCTTCGCCGAGCAAGAAGAGGAAATTCTCACCGATA
ATTTGGGACAGGGATAGCCCAAAGCCACCACATTCTGATGCAGCCAGGGACAAGAAAGCT
GTAGAACCTGTGCCTTCTGAGCTCCCTCCGCCCCCGCCGTTGCCTCCACAAGACCACATC
ACACTGAGGTTGGCTGTGGAGAAGTCACTTATGGATATAGAACCTACTGTTGGTACAGAG
AGTGCTGTGCAGTTGCTGGAACATGAGGTGAATAAGGTGACAGAGCAGGAAGAGGAGTAT
GCAACAATGAGGAACATATCGACTTCAAGATGGGCTGGTGCTAATGATGATGATGATGAT
GGGGCAGCTCCAGTGAAGAAGAAAAGTCTGTCTCCTGCAGACTCCTCTGTGGCAGGGCAG
TGGAAAAGAGCAAGTCCAGAACCTGGTGAAGTATCTGGAGGAAGGACAATGTCTAGGTCA
TCTGACTCTGGGAAAATGAGTAATGATGAGAAAGAAGACTTTGAAGCAAATGAAGATGAC
TATATGGATGTCGACAAGGGACATGCTAGTGACAGTGATACAGAAAACCGTATGTCAGAT
ACTGACTCAGACAATGAAATACACAGACCTGAAACCCCTGAAAGAGAGAAGGCACCACAC
AGGTGTATCAATATGCTTCAAGATTGCAGAAGTGTTGATGAGTTTGAGAGGCTCAACAAA
ATTAACGAGGGCACATATGGTGTTGTATACAGAGCAAGGGATAAGAAGACAAGTGAGATT
GTTGCATTGAAGAAGGTAAAGATGGAGAAGGAGCGAGAAGGTTTCCCATTAACCTCTCTT
AGGGAAATAAATATCCTCTTGTCTTTCCACAATCCTTCAATTGTGGATGTTAAGGAAGTA
GTAGTTGGAAGTAGTCTAGATAGTATTTTTATGGTTATGGAGTACATGGAACATGATCTT
AAAGGTGTCATGGAGACCATGAAACAACCATATACCCAAAGCGAGGTAAAGTGTTTGATG
CTTCAGCTGCTAGAAGGTGTAAAATATCTACATGACAATTGGGTGCTTCATAGGGATCTG
AAGACCTCAAATCTTTTGTTGAATAACCGTGGGCCCCAGAATTGTTGTTAG

Peptide Sequence

PEP ID

Zm00001d025739_P034
PEP Infomation

pep chromosome:B73_RefGen_v4:10:128024034:128027521:-1 gene:Zm00001d025739 transcript:Zm00001d025739_T034 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAAGRHGGYRDYEARERELDAEASRRSKEQHHHLGGRHRDVDRHRDGGRSRGGRDFANGY
GRRRSPPPRSRLAGRLGDREPGEVLSGSASDDSGGRPHRGRENGVLSSGREGDVMAVTDD
SGGRSHRRRENGVLSSGRDGDVMAVTGISSPSKKRKFSPIIWDRDSPKPPHSDAARDKKA
VEPVPSELPPPPPLPPQDHITLRLAVEKSLMDIEPTVGTESAVQLLEHEVNKVTEQEEEY
ATMRNISTSRWAGANDDDDDGAAPVKKKSLSPADSSVAGQWKRASPEPGEVSGGRTMSRS
SDSGKMSNDEKEDFEANEDDYMDVDKGHASDSDTENRMSDTDSDNEIHRPETPEREKAPH
RCINMLQDCRSVDEFERLNKINEGTYGVVYRARDKKTSEIVALKKVKMEKEREGFPLTSL
REINILLSFHNPSIVDVKEVVVGSSLDSIFMVMEYMEHDLKGVMETMKQPYTQSEVKCLM
LQLLEGVKYLHDNWVLHRDLKTSNLLLNNRGPQNCC

Transcript Sequence

Transcript ID

Zm00001d025739_T034
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:128024034:128027521:-1 gene:Zm00001d025739 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GCGGAGCGTCAGCCTATAGCCGTCGCTCCCGTGTCCCGTCCGCCGTCCCCCTTCCTCTCG
TATTCGCTTCGCCGCCCAACCCACTGTGCACCGCTGCCTTCCCGACCGTTCTCGCCGCCG
CCGTCTCCGCGCCTGCCACCCCGCGCGCTCGGCCACCGGCGCCCACGGTGCGGCTCGATC
AAGGCCAGATCAGAACCCGCCCCGGTCCGCGTCACGCCGATATTTTCTGTTTTTTGGTAC
GGATCTAGGGTTTTCCTGCTGCGGATTCGTTCGATTCGCTCATGGCCGCTGGGCGCCATG
GGGGTTACAGGGACTACGAGGCGAGGGAGCGGGAGCTCGACGCGGAGGCCTCCAGGAGGA
GCAAGGAGCAGCACCACCATCTCGGCGGCCGCCACCGCGACGTGGACCGCCACCGCGATG
GCGGGCGCAGCAGGGGTGGCAGAGACTTTGCCAACGGCTACGGTCGCCGACGCTCGCCGC
CACCCCGGAGCCGGCTGGCGGGAAGGCTTGGTGACCGTGAGCCTGGCGAGGTGCTGAGCG
GTAGTGCATCTGATGACTCCGGTGGGAGGCCGCATAGAGGGAGGGAGAATGGCGTGCTCA
GTTCCGGCAGGGAGGGTGATGTGATGGCAGTCACTGATGACTCCGGTGGGAGGTCGCATA
GGAGGAGGGAGAATGGCGTGCTCAGTTCCGGCAGGGATGGTGATGTGATGGCAGTCACAG
GGATATCTTCGCCGAGCAAGAAGAGGAAATTCTCACCGATAATTTGGGACAGGGATAGCC
CAAAGCCACCACATTCTGATGCAGCCAGGGACAAGAAAGCTGTAGAACCTGTGCCTTCTG
AGCTCCCTCCGCCCCCGCCGTTGCCTCCACAAGACCACATCACACTGAGGTTGGCTGTGG
AGAAGTCACTTATGGATATAGAACCTACTGTTGGTACAGAGAGTGCTGTGCAGTTGCTGG
AACATGAGGTGAATAAGGTGACAGAGCAGGAAGAGGAGTATGCAACAATGAGGAACATAT
CGACTTCAAGATGGGCTGGTGCTAATGATGATGATGATGATGGGGCAGCTCCAGTGAAGA
AGAAAAGTCTGTCTCCTGCAGACTCCTCTGTGGCAGGGCAGTGGAAAAGAGCAAGTCCAG
AACCTGGTGAAGTATCTGGAGGAAGGACAATGTCTAGGTCATCTGACTCTGGGAAAATGA
GTAATGATGAGAAAGAAGACTTTGAAGCAAATGAAGATGACTATATGGATGTCGACAAGG
GACATGCTAGTGACAGTGATACAGAAAACCGTATGTCAGATACTGACTCAGACAATGAAA
TACACAGACCTGAAACCCCTGAAAGAGAGAAGGCACCACACAGGTGTATCAATATGCTTC
AAGATTGCAGAAGTGTTGATGAGTTTGAGAGGCTCAACAAAATTAACGAGGGCACATATG
GTGTTGTATACAGAGCAAGGGATAAGAAGACAAGTGAGATTGTTGCATTGAAGAAGGTAA
AGATGGAGAAGGAGCGAGAAGGTTTCCCATTAACCTCTCTTAGGGAAATAAATATCCTCT
TGTCTTTCCACAATCCTTCAATTGTGGATGTTAAGGAAGTAGTAGTTGGAAGTAGTCTAG
ATAGTATTTTTATGGTTATGGAGTACATGGAACATGATCTTAAAGGTGTCATGGAGACCA
TGAAACAACCATATACCCAAAGCGAGGTAAAGTGTTTGATGCTTCAGCTGCTAGAAGGTG
TAAAATATCTACATGACAATTGGGTGCTTCATAGGGATCTGAAGACCTCAAATCTTTTGT
TGAATAACCGTGGGCCCCAGAATTGTTGTTAGGAACAAAGGAGTATTCTACTGCTATTGA
TATGTGGTCTGTGGGCTGTATAATGGCTGAGCTTCTTGCCAAAGAACCGTTATTCAATGG
AAAAACAGAGTTTGAACAGCTAGATAAGATTTTTAGAACACTCGGCACACCTAATGAGAA
GATTTGGCCTGGCTATGCTAAATTACCAGGTGTGAAAGTAAATTTTGTTAAACAACCGTA
TAATAGACTAAGGGATAAGTTCCCAGCCGCTTCTTTTTCTGGGCGACCAATCCTGTCTGA
AGCTGGTTTTGATCTATTGAACAGACTGCTGACTTATGACCCTGATAAGCGCATATCAGC
AGACGATGCTCTTAAGCACAAATGGTTCTCTGAAGTTCCTCTGCCTAAATCAAAGGACTT
CATGCCAACATTCCCTGCTCTTAATGAACTTGACAGGCGTTCCAGAAGGTATCTGAAGAG
TCCTGATCCTCTGGAAGAGCAACGTTTGAAAGAACTGCAAGGGAACATAGGCAACCATGG
GCTTTTTGGGTGAACTAGAAGCACTTGATTGGGTCTGCAAGGGAACATAGGCAACCGTGG
GCTTTTTGGCTGAACTAGAAGCACTTGATTGGGTCCTGTCCGTCCTAACTGTTATGCTTC
ACACTGAAATCCTGAGTTCATGAGGTTAGATATCTTCTGAGGCTTGGTACCGGTTTAAAT
GGATAAGGTTTCTCCTTGTGGCCCATCATAGAAATTTTGTTGCAGGATTAACGCTTCATC
CAGATCGATCATAAAAGCAAATATAATCTACCTGCATCATAAGGTGTGGCGTGTTGGCTT
TTATTGGTTACACCAGTTTCACCTTTGGAACTTCTCTATGTAAAATATTCCAGATTGGTA
CGTTGTAAACAATGTCCAGTGTGTTGGATTTAAATTTAAAACGAAACATCATC