Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d025714_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:10:127160289:127165558:-1 gene:Zm00001d025714 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform
Sequence	ATGATTAAGCAGATCCTTGGCAGGCTGCCGAGGAAGCCGGGGAAGGCTGGGGATAGCCGG GAAGCTGCTGCTGCGGGGAATGGAACTGAGCCGTCGAATTCCTACAGTGTTGCGAGGAGC ATGGACCCAGGTAACAAAAGGGCTGGAAATGGAGATTACCCAGTTCCATCTGGTGTAATT CCGAATCCAGTGATGAATGGGGCTGTGGTGTATCACTCCAATGAACCCTTACCGGCATTC AAGGACGTGCCCATGTCAGAGAAGCAGAATTTGTTTGTCAAGAAGGTGAGCCTATGTTGC GCTGTGTATGACTTTGTGGATCCAACTAAGAACCTCAAGGAGAAGGAGGTGAAGCGCCAG ACACTTATGGAGCTTGTTGATTACGTCGCTTCCGCTAATGGCAAGTTCTCTGAGGTTGTC ATGCTGGAGATCACAAAGATGGTGTCAATTAATTTGTTCCGGAGCTCCAGCCCCACACCT CGTGAGAACAAAGCCATTGAAGGGGTCGATCTGGAGGAGGATGAGCCTCTCATGGATCCT GCATGGTCTCACCTACAGATCGTGTACGAGGTTTTCTTGAGATTTGTAGCTTCACAGGAG ACAGATGCAAAGTTGGCCAAGAGATATATAGACCATTCCTTTATCCTTAGGCTGCTAGAC CTTTTTGACTCTGAGGACCCCAGGGAAAGGGACTATCTAAAGACGATACTTCATCGAATA TATGGTAAATTCATGGTCCATCGACCATTCATCAGGAAAGCAATTAACAACATATTCTAC AGGTTTATATTCGAAACAGAGAAACATAATGGTGTTGCAGAGTTGTTGGAGATCCTGGGC AGTATTATCAATGGGTTTGCCCTTCCACTTAAGGAAGAGCACAAATTGTTCCTTGTTCGT GCACTGATCCCTCTTCACAAGCCGAAATGTGTATCTATGTACCATCAGCAGCTATCGTAT TGCATCACACAGTTTGTTGAGAAGGACTGCAAACTTGCTGACACAGTTATTAGGGGTTTA CTTAAATATTGGCCTGTGACGAACAGTTCAAAGGAGGTGATGTTCTTGGGTGAGTTAGAG GAGGTTTTAGAGGCAACACAGCTTGCAGAGTTCCAAAGATGCATGGTTCCACTCTTCCGT CAGATTAGCCGTAGCATGAACAGCTTTCATTTCCAGGTGGCAGAGCGGGCTCTGTTTCTC TGGAACAATGACCATATTGAAACCCTAATTAAGCAAAACTACAAGGTGCTGTTACCGATC ATCTATCCAGCACTCGAGAGAAACTCCAGAGATCACTGGAACCAAGCTGTCCGTAGCCTG ACACTGAACGTACGCAAGATCTTCTCAGACCATGATTCCACATTCTTCGGGGAGTGCGTC CAGAGGTTCAGTGACGAGGAGCTCAAGCAGGCGGAATCTGATTCAAAACGAGACGCCATG TGGAAGCGCCTGGAGGAAATGGGTGCCTCAAAACCTGGCGGGAACCATCCCTTAGGTGCA CCCAATGGCAAACCCAGTCACGCTGCTGGCTAG

Peptide Sequence

PEP ID	Zm00001d025714_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:10:127160289:127165558:-1 gene:Zm00001d025714 transcript:Zm00001d025714_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform
Sequence	MIKQILGRLPRKPGKAGDSREAAAAGNGTEPSNSYSVARSMDPGNKRAGNGDYPVPSGVI PNPVMNGAVVYHSNEPLPAFKDVPMSEKQNLFVKKVSLCCAVYDFVDPTKNLKEKEVKRQ TLMELVDYVASANGKFSEVVMLEITKMVSINLFRSSSPTPRENKAIEGVDLEEDEPLMDP AWSHLQIVYEVFLRFVASQETDAKLAKRYIDHSFILRLLDLFDSEDPRERDYLKTILHRI YGKFMVHRPFIRKAINNIFYRFIFETEKHNGVAELLEILGSIINGFALPLKEEHKLFLVR ALIPLHKPKCVSMYHQQLSYCITQFVEKDCKLADTVIRGLLKYWPVTNSSKEVMFLGELE EVLEATQLAEFQRCMVPLFRQISRSMNSFHFQVAERALFLWNNDHIETLIKQNYKVLLPI IYPALERNSRDHWNQAVRSLTLNVRKIFSDHDSTFFGECVQRFSDEELKQAESDSKRDAM WKRLEEMGASKPGGNHPLGAPNGKPSHAAG

Transcript Sequence

Transcript ID	Zm00001d025714_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:10:127160289:127165558:-1 gene:Zm00001d025714 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform
Sequence	AGCACTAGCGCATCGATGAAAGGTTCTCTCCTCTGCCCAGAACCCAGATACCAAAATGGG ACCGAGAGAGGCTAAACAGAAGTGACAGCAGCAGCTATCCAGCTCACCCGAGAACAGTTT GTTTACTGTGAAGAACTGAAGACACATCACATTCCGGCTGCCGTCCCTTCCCTTGCATCT GGCTCTCCTTGCAGTCGCAGCCTCGTACACCGCTTGTGCGAGCTTTTACTCCTACCCCAA TCTCCCTTTGCTACTTTTGGGGACCTCCAGACCTCTCAAATCGAGAGAACCAAAAACGAT AGAGAAAGAGAGCCTGTCAGCCCAAGAAAAGGTTCCTCCCCTCCTTCCCCACCTCGCCCT CAGCCCTCATCATCCTCTAACATCCGATTGTGCCCTGTGCTCTGCGGTTCTCGGATCCAA GATTTCGCCGGCCGGCCGCCGGCGGTGGCTCCGGCCTCCGGGAGCGGGAGAAAGACTGGA TTTTTCGGGCCATGGAGATGTGGCCTGATCCGTTCAGGCCCGGGCGGTGGGGTGGCTTCC TGAGCAGGTCTGATTCGTATCGGTTCAAATGATCTCGGCGGCTTGATTGGTCGGTTCCGC TTCCGCCGGGGGATCGGAGCTAGGGCGGTGGTTTCTTGGCCGGCCGGTGGATTCATCGGC TCGGGTCTGGTGGGATCTTGGTGGTTGCTGGTTCAGCACACGAGCCGCAGGTCTGCGTAG ATCCCCTCTTCGCTTCCGTGGCGGATTTGTACTGCTAGGGTTTTGGTTGGGTCTGGTGGA AGATGATTAAGCAGATCCTTGGCAGGCTGCCGAGGAAGCCGGGGAAGGCTGGGGATAGCC GGGAAGCTGCTGCTGCGGGGAATGGAACTGAGCCGTCGAATTCCTACAGTGTTGCGAGGA GCATGGACCCAGGTAACAAAAGGGCTGGAAATGGAGATTACCCAGTTCCATCTGGTGTAA TTCCGAATCCAGTGATGAATGGGGCTGTGGTGTATCACTCCAATGAACCCTTACCGGCAT TCAAGGACGTGCCCATGTCAGAGAAGCAGAATTTGTTTGTCAAGAAGGTGAGCCTATGTT GCGCTGTGTATGACTTTGTGGATCCAACTAAGAACCTCAAGGAGAAGGAGGTGAAGCGCC AGACACTTATGGAGCTTGTTGATTACGTCGCTTCCGCTAATGGCAAGTTCTCTGAGGTTG TCATGCTGGAGATCACAAAGATGGTGTCAATTAATTTGTTCCGGAGCTCCAGCCCCACAC CTCGTGAGAACAAAGCCATTGAAGGGGTCGATCTGGAGGAGGATGAGCCTCTCATGGATC CTGCATGGTCTCACCTACAGATCGTGTACGAGGTTTTCTTGAGATTTGTAGCTTCACAGG AGACAGATGCAAAGTTGGCCAAGAGATATATAGACCATTCCTTTATCCTTAGGCTGCTAG ACCTTTTTGACTCTGAGGACCCCAGGGAAAGGGACTATCTAAAGACGATACTTCATCGAA TATATGGTAAATTCATGGTCCATCGACCATTCATCAGGAAAGCAATTAACAACATATTCT ACAGGTTTATATTCGAAACAGAGAAACATAATGGTGTTGCAGAGTTGTTGGAGATCCTGG GCAGTATTATCAATGGGTTTGCCCTTCCACTTAAGGAAGAGCACAAATTGTTCCTTGTTC GTGCACTGATCCCTCTTCACAAGCCGAAATGTGTATCTATGTACCATCAGCAGCTATCGT ATTGCATCACACAGTTTGTTGAGAAGGACTGCAAACTTGCTGACACAGTTATTAGGGGTT TACTTAAATATTGGCCTGTGACGAACAGTTCAAAGGAGGTGATGTTCTTGGGTGAGTTAG AGGAGGTTTTAGAGGCAACACAGCTTGCAGAGTTCCAAAGATGCATGGTTCCACTCTTCC GTCAGATTAGCCGTAGCATGAACAGCTTTCATTTCCAGGTGGCAGAGCGGGCTCTGTTTC TCTGGAACAATGACCATATTGAAACCCTAATTAAGCAAAACTACAAGGTGCTGTTACCGA TCATCTATCCAGCACTCGAGAGAAACTCCAGAGATCACTGGAACCAAGCTGTCCGTAGCC TGACACTGAACGTACGCAAGATCTTCTCAGACCATGATTCCACATTCTTCGGGGAGTGCG TCCAGAGGTTCAGTGACGAGGAGCTCAAGCAGGCGGAATCTGATTCAAAACGAGACGCCA TGTGGAAGCGCCTGGAGGAAATGGGTGCCTCAAAACCTGGCGGGAACCATCCCTTAGGTG CACCCAATGGCAAACCCAGTCACGCTGCTGGCTAGAATACAATAGCCCACCGTACCAGCC GCATCCGTGTAACTCTTCGGCTCTCGTGCCAAGATCTCCTGGAACCTGGGTTGTGATTTT AGCTTTGGGATTCTTTTTGCGTTGGTTTGCCCCTGTTGTAGGTGGGTCCGATGTGTTTGG TTTTGTAAGAACTGTATGTTCAAAATGTACACACGGAGGAATTTGACAGATTTGGCATGT GTAGCAACATTAATCAGAATTACTATCATATAGTCCAATAAACAACGTCGATTTTGATTG C