Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d025712_T021
CDS Infomation

cds chromosome:B73_RefGen_v4:10:127001039:127006041:-1 gene:Zm00001d025712 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGACCACCGCCGCCCCGCCGCCGCTGCTAATGGCACACCGCGAAGGTGGAGACGTCCCC
ATCTCCCTGTTCCTTGACACCGATCTTGGCACCCATCTCGCCCTGCTCGTCGCCCCGGAC
ACCGACATCCGTGGCCTCAAGTCGCAGGTGGCTGTGGAACACGCTGTCGCCTTCCCCGAC
CTCGGCCCCGTCACCGTGAAGTCCTTCCAGGTCCGGCGGAAGGGTGTACTGTATCGCCTC
TCTGATTCAATGACAGTGATGAGTGCCTTCACCAAAATCAAAGGTGGGTGCTTTCTTCAT
GTCAATATGGCAGAGGCTACAGCAGCCACACACTGCTGCCAAGATGCGCCAGCAACTGAC
ACTAGAAGATTGAATGGTGTTAGTCTTGGAATTTATGAAAAGAACCATGTTCAGGAGCTG
CCTGCAGTGGCACCAGATGTTGCTTGTGATATGCTCCCTAGAGGCCTTGAAGGTTGTAAT
GATGATGCCGTGCTGAATACTGTTCAAACACATGATGTGTTGCCAAATTGTACCTTGGTG
CCATCCTCATCACAGCTAAATACTGAAGTACCGAAGAACAATGCAGTGGGTCTGGCCAGT
TATACTGAAGCAGGAATTGCTCAAGTTATTGACAAAGCAAAGAGTTACAGTGGCCAGATA
AAACATGCTAATCAAACTGAAGGTGCTTATATTATTTCCACATCAAAGGCATGTGTTGAT
AAATCTTTAAATGAGAGTAATATGTCACATGCTGTGGAGGAGCTACATGCAAGTCGAGAC
CATGGGGTTGGTGATGATGTTTCTGATAAAAAGCAAGTCATGGTAGAGGAGCAACTGCTG
GAAGAGATACAAGCAAAGGATAATCTTTCACAAGCAAAGGAGCACAAAAAATGTAGGACT
AGTTCTTTTGACACATCATGTATGGATCTACTGGAAACAGGCACTACTTCTCTTGTGGAA
TCTTTAAACACTTCTAATCATCAAGAAGTCCATGACACCTTACATGAGGAGTCCATTCAG
CTAGAAAATCCAAGCACTGTTGGAAAGAAGAAGAAAAGGAAAAGGCGTCAATTGTCCCCT
TCAAAATCTGCTTCTGCTCAAGAGACAACAGAACCGTCAGCTACAGCAGTTGATTTATTA
ATACCCACAGGTGAAGTTCTGTCTAATAACAGCCCAGGGATACAGATCCATAATATACAT
GCAATGGATAATCTTTCACAAGAAAAGGAGCAGAAAAAATCTAGGACTAGTTCTCCTGAC
ACATCAAATAGGCATTTACTGGAAACAAACCCTACTTCTCTTAGGGAAACTCTAAACACT
TCAAATCATCAAGGCCATGACACTTTAGATGAGGAGTTCATCCAGCCAGAAAACCCAAGT
GCTGCTGGTAAGAAGAAAAAGAAAAGGCGTCAATTGGTCCCTTCTAAATATGCTTCTGCT
CAAATAACGACAGAACCATCGTCTGGGGCAGCCCCAGCGGATTTATCAAAATCCACAGGT
GACAAAGCATATAATGCTGAATTGACTAGCAAAGGTGAAACTGTAGTTGAAGCATCTGGT
TTGCCTCTTTCATCATATGAACATAATGATGGAAACCAGGGGGGCAAAAGTGTTAAGTTT
GTGAGCGATGATCAAGCATCTACTGATTTAATCTCTGAACAAGAGAAGTTTGATCATGCT
CTCAAGGGATGTAGGGATCCTTTAATTGCAGATGACATTTATTCTACAGGTGAAAATGTA
GCTATTGAAGGAAAGACTACAAAAGGAAGTTGTGCCCCTTTAAATGGAGGGGACAGGCAT
GAAGAAATAAAACACCTCAATGAGGGATGTCATAATGCAGGTGTACCTGAAACAAGCAAC
ATGGAGAAAGATGGCAAAAGTACAGATGTCTCTGACAAGAGGCAAACAAGTCAAAATACC
TCGCAAGTGAAGAAGCGCAAGAAATCAAAGGTTGGTTCTGTTGACATGCCTTCCGTGGAT
GCTTCTGGTGAAAAAGATCATCGGTATAGTGAAAATGCGACCAAACAAGATACAGCTTCT
ACTAAAAGGGAGATTGTCCACGAACCTTCTATGCAACAGATGTCAAACATTGTGCATCAG
GGGGATTCAAATGTAATAGAAAATCCAAGTGGTGATGGAAAGAAAAAGAAAAAAAGAAGA
CACCATTCAGAATCCTTAAAGGGTATGAATCCTAGTCAAGATCTGACCAAATCTTCTGGA
TTTGTAACAAACGAAAGCTCGATACAATGCACAGGTGCTGCTCCAATAAATGCAAAGCAA
ACAAACTTAGTCATTATAGAAGGAGAAACAGTTACTGGGCACAGGAAGCTTAGTGAAAAT
CTAGATGTAGCGGCAACACATGTTGTTGATGAGGTATTGGCAGATCTAAGATCTAAAGAC
GGCTTAAGTAAGGATCTGGATGAAAATCTATTACCAGGACAAACTCACCTAGGCAGCAAT
CAGAATGGAATAGAAGTTCCTGAATCCATTGCTGTTAAAGTTGGTAGTACTACTGCAGCA
TTACCTCCGAAATATCCTGCAACAGTTCACTCTGCTTCTCCTGTTAACTCACCTAGACAA
AGGAAGTCTAAGGGGAAAAAATTGAAAGTGCTATCCACCATGGCTGACTCTTCTCATCAA
TCAAGTGGTGTACCCGAAGAAGATGCTAATAGAAAATTAAAAGAGTCTGATTCTTTGAGG
TTTGCTGATAAAACAAGTGATCATGAGGATATAGTAACTGCAAATGTGGTTGCTCAAGCT
GATGAAAAACGCAAAGCCACTAAGCGTCAAAGAAAGAAAGGTTCTGTAAAGCAGGTACTT
GATACATTGGACTTGAAGGAAGTGAATGACACAGAAGAAAATTTGGTTCAGGGAGGTTCT
GTAGTTGACACTCCCTTGAGCACTGCTGGGAACGTAGAGCAGAAAGACTGGTCTTCTGAG
ACTTTGAGTCCTAAAGAACAAGAAACTAATTGTTCTACTCATGGGCTGGATAGTCACACA
GCTAAGGACAGCCAGGATGAGTATGTAACTGACACCATTGGGACCCATGATAATGAAAAT
GCTGCAGGAACCCCAGCCTTGCATGTAGTTCAGAAAGATGCCATGGCCCTCAAATCCGCC
AGCCCTAATTCTCAAAAGGAGCAGGAAACATCTTTGAACTCTGAACTACAAAGTCAGGAT
TGTCCTCTGGAACATGGTTTTAGTGCAGATTTGGTGAACTCCAGGACTGAAAAGGGAGTC
AGGACTACAAGTTCTGCTAGTGCTGTTAAATCTGATTACAACACCATGTTTCATCCTGCT
AATGGTAGAATCAATGTCCTTGATCATTTTAGCCGCAGCAATTTGAATGATGGTTCATCA
ATTGTCGCAGAAAGTAAGCAAAACAATGAAGATGGAAGTTTA

Peptide Sequence

PEP ID

Zm00001d025712_P021
PEP Infomation

pep chromosome:B73_RefGen_v4:10:127001039:127006041:-1 gene:Zm00001d025712 transcript:Zm00001d025712_T021 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MTTAAPPPLLMAHREGGDVPISLFLDTDLGTHLALLVAPDTDIRGLKSQVAVEHAVAFPD
LGPVTVKSFQVRRKGVLYRLSDSMTVMSAFTKIKGGCFLHVNMAEATAATHCCQDAPATD
TRRLNGVSLGIYEKNHVQELPAVAPDVACDMLPRGLEGCNDDAVLNTVQTHDVLPNCTLV
PSSSQLNTEVPKNNAVGLASYTEAGIAQVIDKAKSYSGQIKHANQTEGAYIISTSKACVD
KSLNESNMSHAVEELHASRDHGVGDDVSDKKQVMVEEQLLEEIQAKDNLSQAKEHKKCRT
SSFDTSCMDLLETGTTSLVESLNTSNHQEVHDTLHEESIQLENPSTVGKKKKRKRRQLSP
SKSASAQETTEPSATAVDLLIPTGEVLSNNSPGIQIHNIHAMDNLSQEKEQKKSRTSSPD
TSNRHLLETNPTSLRETLNTSNHQGHDTLDEEFIQPENPSAAGKKKKKRRQLVPSKYASA
QITTEPSSGAAPADLSKSTGDKAYNAELTSKGETVVEASGLPLSSYEHNDGNQGGKSVKF
VSDDQASTDLISEQEKFDHALKGCRDPLIADDIYSTGENVAIEGKTTKGSCAPLNGGDRH
EEIKHLNEGCHNAGVPETSNMEKDGKSTDVSDKRQTSQNTSQVKKRKKSKVGSVDMPSVD
ASGEKDHRYSENATKQDTASTKREIVHEPSMQQMSNIVHQGDSNVIENPSGDGKKKKKRR
HHSESLKGMNPSQDLTKSSGFVTNESSIQCTGAAPINAKQTNLVIIEGETVTGHRKLSEN
LDVAATHVVDEVLADLRSKDGLSKDLDENLLPGQTHLGSNQNGIEVPESIAVKVGSTTAA
LPPKYPATVHSASPVNSPRQRKSKGKKLKVLSTMADSSHQSSGVPEEDANRKLKESDSLR
FADKTSDHEDIVTANVVAQADEKRKATKRQRKKGSVKQVLDTLDLKEVNDTEENLVQGGS
VVDTPLSTAGNVEQKDWSSETLSPKEQETNCSTHGLDSHTAKDSQDEYVTDTIGTHDNEN
AAGTPALHVVQKDAMALKSASPNSQKEQETSLNSELQSQDCPLEHGFSADLVNSRTEKGV
RTTSSASAVKSDYNTMFHPANGRINVLDHFSRSNLNDGSSIVAESKQNNEDGSL

Transcript Sequence

Transcript ID

Zm00001d025712_T021
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:127001039:127006041:-1 gene:Zm00001d025712 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAAGAAATACGCCTTTGCATCTCCTAAAACGTACCCTGACCCTCACGGCTTCCCTCGTCT
TTGCCCTCGCCTCCCTGGTAGCGGCGGCCGCTTGCCCCGCTATGACCACCGCCGCCCCGC
CGCCGCTGCTAATGGCACACCGCGAAGGTGGAGACGTCCCCATCTCCCTGTTCCTTGACA
CCGATCTTGGCACCCATCTCGCCCTGCTCGTCGCCCCGGACACCGACATCCGTGGCCTCA
AGTCGCAGGTGGCTGTGGAACACGCTGTCGCCTTCCCCGACCTCGGCCCCGTCACCGTGA
AGTCCTTCCAGGTCCGGCGGAAGGGTGTACTGTATCGCCTCTCTGATTCAATGACAGTGA
TGAGTGCCTTCACCAAAATCAAAGGTGGGTGCTTTCTTCATGTCAATATGGCAGAGGCTA
CAGCAGCCACACACTGCTGCCAAGATGCGCCAGCAACTGACACTAGAAGATTGAATGGTG
TTAGTCTTGGAATTTATGAAAAGAACCATGTTCAGGAGCTGCCTGCAGTGGCACCAGATG
TTGCTTGTGATATGCTCCCTAGAGGCCTTGAAGGTTGTAATGATGATGCCGTGCTGAATA
CTGTTCAAACACATGATGTGTTGCCAAATTGTACCTTGGTGCCATCCTCATCACAGCTAA
ATACTGAAGTACCGAAGAACAATGCAGTGGGTCTGGCCAGTTATACTGAAGCAGGAATTG
CTCAAGTTATTGACAAAGCAAAGAGTTACAGTGGCCAGATAAAACATGCTAATCAAACTG
AAGGTGCTTATATTATTTCCACATCAAAGGCATGTGTTGATAAATCTTTAAATGAGAGTA
ATATGTCACATGCTGTGGAGGAGCTACATGCAAGTCGAGACCATGGGGTTGGTGATGATG
TTTCTGATAAAAAGCAAGTCATGGTAGAGGAGCAACTGCTGGAAGAGATACAAGCAAAGG
ATAATCTTTCACAAGCAAAGGAGCACAAAAAATGTAGGACTAGTTCTTTTGACACATCAT
GTATGGATCTACTGGAAACAGGCACTACTTCTCTTGTGGAATCTTTAAACACTTCTAATC
ATCAAGAAGTCCATGACACCTTACATGAGGAGTCCATTCAGCTAGAAAATCCAAGCACTG
TTGGAAAGAAGAAGAAAAGGAAAAGGCGTCAATTGTCCCCTTCAAAATCTGCTTCTGCTC
AAGAGACAACAGAACCGTCAGCTACAGCAGTTGATTTATTAATACCCACAGGTGAAGTTC
TGTCTAATAACAGCCCAGGGATACAGATCCATAATATACATGCAATGGATAATCTTTCAC
AAGAAAAGGAGCAGAAAAAATCTAGGACTAGTTCTCCTGACACATCAAATAGGCATTTAC
TGGAAACAAACCCTACTTCTCTTAGGGAAACTCTAAACACTTCAAATCATCAAGGCCATG
ACACTTTAGATGAGGAGTTCATCCAGCCAGAAAACCCAAGTGCTGCTGGTAAGAAGAAAA
AGAAAAGGCGTCAATTGGTCCCTTCTAAATATGCTTCTGCTCAAATAACGACAGAACCAT
CGTCTGGGGCAGCCCCAGCGGATTTATCAAAATCCACAGGTGACAAAGCATATAATGCTG
AATTGACTAGCAAAGGTGAAACTGTAGTTGAAGCATCTGGTTTGCCTCTTTCATCATATG
AACATAATGATGGAAACCAGGGGGGCAAAAGTGTTAAGTTTGTGAGCGATGATCAAGCAT
CTACTGATTTAATCTCTGAACAAGAGAAGTTTGATCATGCTCTCAAGGGATGTAGGGATC
CTTTAATTGCAGATGACATTTATTCTACAGGTGAAAATGTAGCTATTGAAGGAAAGACTA
CAAAAGGAAGTTGTGCCCCTTTAAATGGAGGGGACAGGCATGAAGAAATAAAACACCTCA
ATGAGGGATGTCATAATGCAGGTGTACCTGAAACAAGCAACATGGAGAAAGATGGCAAAA
GTACAGATGTCTCTGACAAGAGGCAAACAAGTCAAAATACCTCGCAAGTGAAGAAGCGCA
AGAAATCAAAGGTTGGTTCTGTTGACATGCCTTCCGTGGATGCTTCTGGTGAAAAAGATC
ATCGGTATAGTGAAAATGCGACCAAACAAGATACAGCTTCTACTAAAAGGGAGATTGTCC
ACGAACCTTCTATGCAACAGATGTCAAACATTGTGCATCAGGGGGATTCAAATGTAATAG
AAAATCCAAGTGGTGATGGAAAGAAAAAGAAAAAAAGAAGACACCATTCAGAATCCTTAA
AGGGTATGAATCCTAGTCAAGATCTGACCAAATCTTCTGGATTTGTAACAAACGAAAGCT
CGATACAATGCACAGGTGCTGCTCCAATAAATGCAAAGCAAACAAACTTAGTCATTATAG
AAGGAGAAACAGTTACTGGGCACAGGAAGCTTAGTGAAAATCTAGATGTAGCGGCAACAC
ATGTTGTTGATGAGGTATTGGCAGATCTAAGATCTAAAGACGGCTTAAGTAAGGATCTGG
ATGAAAATCTATTACCAGGACAAACTCACCTAGGCAGCAATCAGAATGGAATAGAAGTTC
CTGAATCCATTGCTGTTAAAGTTGGTAGTACTACTGCAGCATTACCTCCGAAATATCCTG
CAACAGTTCACTCTGCTTCTCCTGTTAACTCACCTAGACAAAGGAAGTCTAAGGGGAAAA
AATTGAAAGTGCTATCCACCATGGCTGACTCTTCTCATCAATCAAGTGGTGTACCCGAAG
AAGATGCTAATAGAAAATTAAAAGAGTCTGATTCTTTGAGGTTTGCTGATAAAACAAGTG
ATCATGAGGATATAGTAACTGCAAATGTGGTTGCTCAAGCTGATGAAAAACGCAAAGCCA
CTAAGCGTCAAAGAAAGAAAGGTTCTGTAAAGCAGGTACTTGATACATTGGACTTGAAGG
AAGTGAATGACACAGAAGAAAATTTGGTTCAGGGAGGTTCTGTAGTTGACACTCCCTTGA
GCACTGCTGGGAACGTAGAGCAGAAAGACTGGTCTTCTGAGACTTTGAGTCCTAAAGAAC
AAGAAACTAATTGTTCTACTCATGGGCTGGATAGTCACACAGCTAAGGACAGCCAGGATG
AGTATGTAACTGACACCATTGGGACCCATGATAATGAAAATGCTGCAGGAACCCCAGCCT
TGCATGTAGTTCAGAAAGATGCCATGGCCCTCAAATCCGCCAGCCCTAATTCTCAAAAGG
AGCAGGAAACATCTTTGAACTCTGAACTACAAAGTCAGGATTGTCCTCTGGAACATGGTT
TTAGTGCAGATTTGGTGAACTCCAGGACTGAAAAGGGAGTCAGGACTACAAGTTCTGCTA
GTGCTGTTAAATCTGATTACAACACCATGTTTCATCCTGCTAATGGTAGAATCAATGTCC
TTGATCATTTTAGCCGCAGCAATTTGAATGATGGTTCATCAATTGTCGCAGAAAGTAAGC
AAAACAATGAAGATGGAAGTTTAAG