Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d025674_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:10:125986664:125989972:1 gene:Zm00001d025674 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probably inactive leucine-rich repeat receptor-like protein kinase

Sequence

ATGGCCGCCGCCACCTGCCTCCCTCTCTTCGTCCTCGTTTCAGTACTGATGGCCGCCTCG
ACCTCGCCGTCTTCGGCGGCAGAGACGCCGCAGGAGCTGCTGCTCGACTTCAAGGCGTCC
CTGCAGGACCCGTCGGGCGCTCTCTCCGCCTGGTCGAGCTCCACGCCCTACTGCAACTGG
CCGCACGTCGCCTGCGCCATCAGCGCCGCCGCGAACGCGACCGTCTCGGTCTCCATCTCG
CTCCAGGGCCTCGGCCTCTCGGGCGACCTCGCCGCCTCCTCCCTCTGCCGCGTGCGGGGC
CTGATCGCGCTGAGCCTCGCGTCCAACGGCTTCAACCAGACCATCCCGCTGGAGCTGTCG
CGCTGCGCCTCGCTCGCGTCGCTCAACCTCAGCGCCGGCGCCTTCTGGGGCCCGCTCCCC
GAGCAGCTGGCCATGCTCACCTCGCTCGTGTCGCTCGACCTCAGCCGCAACAGCTTCGAG
GGCCAGGTGCCCGCCGGCCTCGCCGCGCTCGGCGGCCTCCAGGTGCTCGACCTCGGGGAG
AACCTGCTCTCCGGCGTGCTCCACCCGGCGCTGTTCGGCAACCTCACCAGCCTGCACCTC
CTGGACCTGTCCAGGAACCAGTTCCTCGACTCCGAGCTGCCGCGGGAGCTCGGCAGGATG
AGCAGCCTCAGGTGGCTGTTCCTGCAGGGCTCGGGGTTCAGCGGCGTCATCCCGGAATCC
TTCCTCGGGCTGGAGCAGCTGGAGGCTCTTGACCTGTCCATGAACAACCTGGCCGGCGTC
GTGCCTCCCGGGTTCGGCCTCAGGTTGCAGAAGCTGATGACTCTGGATTTGTCACAGAAC
GGCCTCTCCGGGCAGTTGCCGGAGGAGATCGCTAGCTGCTCGATGCTTCGGAGGTTCGAG
GTCCACGACAACGCCTTCAGCGGGGAGCTGCCTGCCGGGCTCTGGTCGCTGCCGGACCTA
CGCGTCATCCGGGCCCAGAACAACCGGTTCACCGGACGCCTGCGCGAGTTCCCGGGCGGC
CAGTCTCGGCTCGAGCAGGTTCAGATTGACAACAACAGCTTCTCCGGCGGGATACCTCAG
AGCATCGGCCTGGTCCGCACCATGTACCGTTTCTCCGCCTCCCTCAACGAGCTCAACGGC
AGCTTGCCGGACAACCTCTGCGACTCTCCCGCGATGAGCATCATCAACATCTCCCGCAAC
GCGCTCTCCGGCACGATCCCGGCGTTCAAGAACTGCAGGAGGCTGGTGTCGCTGTACCTG
GCCGGCAACGGCTTCACCGGGCCTATACCGGCGTCCCTCGGAGACTTACAGGTGCTGACG
TACATCGACCTGTCCAGCAACGCCCTCACCGGCGGCATTCCGACGGAGCTCCAGAACCTG
AAGCTCGCCCTGCTGAATGTCTCGTACAACCAGCTCTCCGGCCGCGTGCCGCCATCTCTG
ATCACCGAGCTTCCCGCCGTGTTCCTCCAGGGCAACCCGGGGCTGTGCGGCCCGGGGTTG
CCGAAAGACTGCGACGCCGACGCGCCATCGCGGAGGCGTCAGGGACTCGCGGTGGCCGCA
ACCGTGGCGTCGTTTCTCACCGGCGTGGCGCTGCTCGCTGTCGGGGCATTCGCGGTCTGC
AAGAGGTTACGCGGCAGCGAGTCCTCCTCCTCCTCCTCCCCGTGGAAGCTCGTGCTCTTT
CACCCTGTCAGAATCACCGGAGAGGAGCTGCTCGCTGGATTCCACGACAAGAATATCATC
GGCAGAGGTGCCTTTGGAAGAGTTTACCTGATCGAGCTCCAAGACGGGCAAAAGGTTGCG
GTGAAGAGGCTGGTGAACTCGTCAGGCAAGCTAACATTCAGAGTAGCCAAGAACGAGATG
GAAGCACTGGCGAAAATCCGGCACAAGAACATCGCCAAGGTGCTGGGATTCTTCTACTCC
GGGTCCGACGGCGAGGTCAGCATCATATATGACCACTCGCAGTCGCAGGTAGGAAGCTTG
CAGGATCTCATCTGCGCGCCGAAACTCACAATCTGCTGGAAGGACCGGGTGAGGATCGCT
CTGGGAGTAGCTCAAGGGCTGGCACACCTTCACCATGACCATGCTCCTCAAGTGCTGCAT
AGAGACCTCAAGTCGAGCAATGTGCTGCTACTCGGTGATGAACTCGAGCCCAGGGTCACC
GGGTTTGGGATTGATCGTGTTGTCGGGGAGATGGCGTACCAGTCTTGCATGTCTTCGGAC
CTGAATTACAAGTGCTATGTTGCACCAGAGCAAAGCTGCACCAAGAAACCAACGCACCTC
ATGGACGTCTACAGCTTCGGGGTCATCCTACTGGAACTGGTCACCGCAGCACAGCGGCCG
GCGTCCGACGGCGAGTCCGTCGACGTCGTCAAGTGGGTGCGGCGGCGGGCCAACGTGACC
GACGGAGTGTCGCAGATACTTGACCCCAGCATCGCCAGCGCGGCGACGCAGAAGGGGATG
CAGGCCACCCTCGAGCTCGCCCTGCGCTGCACGTCAGTGGTGCCCGATCGGAGACCGGCC
ATGGATGAGGTTGCCCGGTCGCTGCAGGCAATCAGTTTCGCTAGTGTTCATCCGCAGACG
CCGATGCTCACTAAATCGCCCGGGACTCTGGAACCATGA

Peptide Sequence

PEP ID

Zm00001d025674_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:10:125986664:125989972:1 gene:Zm00001d025674 transcript:Zm00001d025674_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probably inactive leucine-rich repeat receptor-like protein kinase

Sequence

MAAATCLPLFVLVSVLMAASTSPSSAAETPQELLLDFKASLQDPSGALSAWSSSTPYCNW
PHVACAISAAANATVSVSISLQGLGLSGDLAASSLCRVRGLIALSLASNGFNQTIPLELS
RCASLASLNLSAGAFWGPLPEQLAMLTSLVSLDLSRNSFEGQVPAGLAALGGLQVLDLGE
NLLSGVLHPALFGNLTSLHLLDLSRNQFLDSELPRELGRMSSLRWLFLQGSGFSGVIPES
FLGLEQLEALDLSMNNLAGVVPPGFGLRLQKLMTLDLSQNGLSGQLPEEIASCSMLRRFE
VHDNAFSGELPAGLWSLPDLRVIRAQNNRFTGRLREFPGGQSRLEQVQIDNNSFSGGIPQ
SIGLVRTMYRFSASLNELNGSLPDNLCDSPAMSIINISRNALSGTIPAFKNCRRLVSLYL
AGNGFTGPIPASLGDLQVLTYIDLSSNALTGGIPTELQNLKLALLNVSYNQLSGRVPPSL
ITELPAVFLQGNPGLCGPGLPKDCDADAPSRRRQGLAVAATVASFLTGVALLAVGAFAVC
KRLRGSESSSSSSPWKLVLFHPVRITGEELLAGFHDKNIIGRGAFGRVYLIELQDGQKVA
VKRLVNSSGKLTFRVAKNEMEALAKIRHKNIAKVLGFFYSGSDGEVSIIYDHSQSQVGSL
QDLICAPKLTICWKDRVRIALGVAQGLAHLHHDHAPQVLHRDLKSSNVLLLGDELEPRVT
GFGIDRVVGEMAYQSCMSSDLNYKCYVAPEQSCTKKPTHLMDVYSFGVILLELVTAAQRP
ASDGESVDVVKWVRRRANVTDGVSQILDPSIASAATQKGMQATLELALRCTSVVPDRRPA
MDEVARSLQAISFASVHPQTPMLTKSPGTLEP

Transcript Sequence

Transcript ID

Zm00001d025674_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:125986664:125989972:1 gene:Zm00001d025674 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probably inactive leucine-rich repeat receptor-like protein kinase

Sequence

GAGCGAAGAGCCGAAGACTGCGTTCTTGTTGTCCTGCACTCCTGCGCAGTCGACGGCAGC
TCGCTCGCTAAGTCGCTAGTAAGTTGACGCCGCCGACACTCGGCTCCACTTCCACTGGTC
TACACTCCACTCACCAGCTCCCATCCGTCGTCCATGGCCGCCGCCACCTGCCTCCCTCTC
TTCGTCCTCGTTTCAGTACTGATGGCCGCCTCGACCTCGCCGTCTTCGGCGGCAGAGACG
CCGCAGGAGCTGCTGCTCGACTTCAAGGCGTCCCTGCAGGACCCGTCGGGCGCTCTCTCC
GCCTGGTCGAGCTCCACGCCCTACTGCAACTGGCCGCACGTCGCCTGCGCCATCAGCGCC
GCCGCGAACGCGACCGTCTCGGTCTCCATCTCGCTCCAGGGCCTCGGCCTCTCGGGCGAC
CTCGCCGCCTCCTCCCTCTGCCGCGTGCGGGGCCTGATCGCGCTGAGCCTCGCGTCCAAC
GGCTTCAACCAGACCATCCCGCTGGAGCTGTCGCGCTGCGCCTCGCTCGCGTCGCTCAAC
CTCAGCGCCGGCGCCTTCTGGGGCCCGCTCCCCGAGCAGCTGGCCATGCTCACCTCGCTC
GTGTCGCTCGACCTCAGCCGCAACAGCTTCGAGGGCCAGGTGCCCGCCGGCCTCGCCGCG
CTCGGCGGCCTCCAGGTGCTCGACCTCGGGGAGAACCTGCTCTCCGGCGTGCTCCACCCG
GCGCTGTTCGGCAACCTCACCAGCCTGCACCTCCTGGACCTGTCCAGGAACCAGTTCCTC
GACTCCGAGCTGCCGCGGGAGCTCGGCAGGATGAGCAGCCTCAGGTGGCTGTTCCTGCAG
GGCTCGGGGTTCAGCGGCGTCATCCCGGAATCCTTCCTCGGGCTGGAGCAGCTGGAGGCT
CTTGACCTGTCCATGAACAACCTGGCCGGCGTCGTGCCTCCCGGGTTCGGCCTCAGGTTG
CAGAAGCTGATGACTCTGGATTTGTCACAGAACGGCCTCTCCGGGCAGTTGCCGGAGGAG
ATCGCTAGCTGCTCGATGCTTCGGAGGTTCGAGGTCCACGACAACGCCTTCAGCGGGGAG
CTGCCTGCCGGGCTCTGGTCGCTGCCGGACCTACGCGTCATCCGGGCCCAGAACAACCGG
TTCACCGGACGCCTGCGCGAGTTCCCGGGCGGCCAGTCTCGGCTCGAGCAGGTTCAGATT
GACAACAACAGCTTCTCCGGCGGGATACCTCAGAGCATCGGCCTGGTCCGCACCATGTAC
CGTTTCTCCGCCTCCCTCAACGAGCTCAACGGCAGCTTGCCGGACAACCTCTGCGACTCT
CCCGCGATGAGCATCATCAACATCTCCCGCAACGCGCTCTCCGGCACGATCCCGGCGTTC
AAGAACTGCAGGAGGCTGGTGTCGCTGTACCTGGCCGGCAACGGCTTCACCGGGCCTATA
CCGGCGTCCCTCGGAGACTTACAGGTGCTGACGTACATCGACCTGTCCAGCAACGCCCTC
ACCGGCGGCATTCCGACGGAGCTCCAGAACCTGAAGCTCGCCCTGCTGAATGTCTCGTAC
AACCAGCTCTCCGGCCGCGTGCCGCCATCTCTGATCACCGAGCTTCCCGCCGTGTTCCTC
CAGGGCAACCCGGGGCTGTGCGGCCCGGGGTTGCCGAAAGACTGCGACGCCGACGCGCCA
TCGCGGAGGCGTCAGGGACTCGCGGTGGCCGCAACCGTGGCGTCGTTTCTCACCGGCGTG
GCGCTGCTCGCTGTCGGGGCATTCGCGGTCTGCAAGAGGTTACGCGGCAGCGAGTCCTCC
TCCTCCTCCTCCCCGTGGAAGCTCGTGCTCTTTCACCCTGTCAGAATCACCGGAGAGGAG
CTGCTCGCTGGATTCCACGACAAGAATATCATCGGCAGAGGTGCCTTTGGAAGAGTTTAC
CTGATCGAGCTCCAAGACGGGCAAAAGGTTGCGGTGAAGAGGCTGGTGAACTCGTCAGGC
AAGCTAACATTCAGAGTAGCCAAGAACGAGATGGAAGCACTGGCGAAAATCCGGCACAAG
AACATCGCCAAGGTGCTGGGATTCTTCTACTCCGGGTCCGACGGCGAGGTCAGCATCATA
TATGACCACTCGCAGTCGCAGGTAGGAAGCTTGCAGGATCTCATCTGCGCGCCGAAACTC
ACAATCTGCTGGAAGGACCGGGTGAGGATCGCTCTGGGAGTAGCTCAAGGGCTGGCACAC
CTTCACCATGACCATGCTCCTCAAGTGCTGCATAGAGACCTCAAGTCGAGCAATGTGCTG
CTACTCGGTGATGAACTCGAGCCCAGGGTCACCGGGTTTGGGATTGATCGTGTTGTCGGG
GAGATGGCGTACCAGTCTTGCATGTCTTCGGACCTGAATTACAAGTGCTATGTTGCACCA
GAGCAAAGCTGCACCAAGAAACCAACGCACCTCATGGACGTCTACAGCTTCGGGGTCATC
CTACTGGAACTGGTCACCGCAGCACAGCGGCCGGCGTCCGACGGCGAGTCCGTCGACGTC
GTCAAGTGGGTGCGGCGGCGGGCCAACGTGACCGACGGAGTGTCGCAGATACTTGACCCC
AGCATCGCCAGCGCGGCGACGCAGAAGGGGATGCAGGCCACCCTCGAGCTCGCCCTGCGC
TGCACGTCAGTGGTGCCCGATCGGAGACCGGCCATGGATGAGGTTGCCCGGTCGCTGCAG
GCAATCAGTTTCGCTAGTGTTCATCCGCAGACGCCGATGCTCACTAAATCGCCCGGGACT
CTGGAACCATGAATGGCACTGGTGTGGTGTGGTGGCGGCGTAGCGTAAGGGTTCACAGTA
TCCATTACCGCGTAGGCGCATAGCCCTTCCTTCTTGTAGTTGTACATACATGGTAATAAT
AAAGAGAAATAAATGGTCAGCGTGGATTAGAAGCTTATTCTGCAACGAAAGGTTTAGAGT
GTTTTCATATTTGCAGAAATCTGGTTGAGGATCTGATTATTTTCCTTCCGTAGACCTTTG
ATTGTCTTAGGAATCCTCTGGGATAAAAACTTATGGAGATGCTCTTTGTTCTATAGATTG
CAGCAATCTGGTTTAGAGTGTTTCC