Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d025668_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:10:125572960:125578917:-1 gene:Zm00001d025668 gene_biotype:protein_coding transcript_biotype:protein_coding description:hapless 8
Sequence	ATGTTATCCAGTGAGCAGCCTTCAGGCCCCTCATGTTCCTTCAAGTCTACTGGCCCGGGT GTGAGCACTGATCCGGCAACCTCCGTGGCCGAGGGGCCGCCGAGCCAGGATCCCAGAGAT CTGGTCCAACCTTATCCCAAGTTCTCCATAAGCAGAGATTATGTGTTTGCTTCAAGAAGC AAAGGCATCAAGAGAAGCTGGCCTTTCCATCCACATTCATTGCAGCTTTGCCTAGAGCGC GGTGTGAAGGATCCATTGCCTCCATTTGAGTCTCCCGATTTGATCCGGTCACAGCCATTA AATATTTCCACTGACTTTGAGCAATCTGCTGCTTGCTTAGAACTCAATAGTGTTGGTCTG GTGAAGAATAGAGATGCTAGTTCCTTAAACGAGTATACAGGCAATATCAACTTCCAGTCA TGCCAACCAGTAGATGAGTCACTTGGACCTTTGCCATACACATCGCCAGAGGATGGGAAA TCTGGTATCAACCAAGTGGGAAGTACAAATGAATCAGATCATCCTGATGAGGTTATACCA ATAGATCTACAAGATAATAGCTGTACAAAAGCAAGTCAGCAAATTGAGGTTGATGTGCCC TTGCGGCGGTTGAGAAATCTTGACTTATCATGCGAGCCATCTGAAAAGAAGTGCAAATTT GTAGTCAAGTTAGGTGCCACGACGGATATTCGGCGAGCAGAGGATATAGCATCTAACTCT AGCTCAGTTTCAGATCCGATGGCTTCAAAGACTTGTCCTGTTTGCAAAGTATTTGCTTCG ACTTCAAACACCACATTGAATGCCCACATAGATCAGTGCCTTTCTGCAGAGTCTAATACT GAGCTTGTTGAAACGGTCCTTGTGAAACCTAAAGTGAAGCCAAGGAAGAAGCGATTGATG GTGGACATATACAAGACTGCTCTTCCATGCACACTTGAGGATCTTGATCAGAGGAATGGC ACTAATTGGGCAGTTGAGTTGTCTATGTCTCCAGTGAGCAGAGAGGTTTGCACTGAGAAC CGAAGCCCAGAAATGGTATCATTTGACAGAAGAGATGATGAAAGAGAAGGAGATGTCTAT GTTGATTCTAACGGCATAAAAATTAGAATTTTGTCCAAGTGTAATGATGTACCTTTGGTG TTGAGGGATGACCTTGGTTCGAGGAAAGTTGCGAAGCATGGAACTGGAAAAGGTATACTG ATGAGCAAAAAGATGCTGAAGTCAAAGCTTTTGAAGAATAAGAAGCTCAAGATGCATGGA AAGAAGTACAACAAGACAAGCCCTTTGAACTCCCAGGTTCAAGCATATCCACATGATGAT ATTAACGAGGAAACCTCCGAGGAGGAGTGGCATGCGCGGAATCCTTTTGAAAGCACCAGC AATTGTTGTTCCAGGACTATGCAGCAGTGGGTGTGCTCCAAACGCTCAGATATCGCCAAG AGTTTAAGCAGAAACCATAGTGGTAAAGCATTTGATAAAGTGATACCTGGAGCACAGAAA TCGGATAGGAACAACATGCTTGGCTTTAATGATTCTCAAGTTCCAGAAAGTCCTGCTGGG GCGTTTTCTTCGGAGTCACCAGAATACATGGCCACAACTTCAGAAGCCATTGGTGTTGAG CAGAGCAATGGTCCTTCAAAAGTGCTTAGATCGATTCCTACATGGTCTTCAAAAACTCAC CGTCTTCAGAGCAGTGTCATGCCAAAAACACCTAGATCAGCTGCTGCTCTTGCAAAGAGA AAAATTAAGGAGATTGGGAGGAGAGAAGCTACCAAATTAGATAATTACAATATAGTGAGG AATCCCACTTCAGTGAAAAGATCTGAAACTAGGACTCTTTCCTTCACTGCAGGGCCAAGC AATGGATCAAACAGGTTAGCATCTACCTCAAAGAAGATCCGGAAGCATCGATCTCTGTTG AGGACCGGCAAGCGTGCATTTTCACCTTTTAGTACTAGAGTAGTTCATGGTTTTGGTGAA GAGCGTGAACTTGATACCAGACATGTAAATAAGAAATTCCGGATTACTAGTAATGAGGTT CCCAAGAAGTTTTTGAAGCATACTGAAGAGGATACTGCAGATAATGACTTCTCTCTTGCA AGTGACATGACAGTATCAGGACAACAGAATGATCAATATGATGTTGCACAGGAAACAGAG GGTACACAAATGGATTGTGAAGGTGAAGATGCTGAAACTGATGTGCCATATGATTCTGTA TCCAGAAGTGATCCTGCTGACTGTTGCAACCAAATAAGTGATGTTTCTCTGAGTCCTGAA AATAACAGAACAACAGATGATGATGTTTTAGTTGAAGGCTATAGTGTAGCTGTGGAGGAT CCAAACTCCAGTGAGAAATTAGCACATGGGCATGAATCCAACTGTGCTACCAATAATGAA ATGGATGAATGGCAGATGGATCCGACTTCAACAAAGGAATCTAGTCCCTGCTTAGTTAGT AACAGGGACATGGGTCCTGGAGGTCCTCAGGATAACTCATCAATAACATCAAATGGAGAA AACTTTAATCAAGAGCATGGTCTGCCACTCGGACAGGACTCACTAGATTCTCCTGTATCA ACTGCCTCAACTATGTCCCCTCCAGCTGCTTTGAAGGATTCAAGGATTAACGATGAAGAA CCTGGCCCATCTACTGGTAGAACTGTTGAAGAGCAAATCACTGGGTGCTTGAATCAAGAA GCCAAGTCAATACCTATGGCCAGAGAAGGTGAACTTCCCAAAGAGAAGCCTTTTCGATGT TCTTGCCAGGAGAACATTTCCAGAGAGTCTCATCAAAGTGTTGTTGCCAGACCAACGCTG AATTTTACTGGAAAGCAGGTTCCGCAATTGCACATTGGTTCGAGGGCATCATCATCTTTC AGCATGTACCAAAGAACCAGCGCAAAGCCCAACCCCTGCTTAGATTCACATGAACATCTT TCAGCGGCTAAGGTTGCAGCGGAATCTGCTGTCAGCCTCCCTTCTTACTCAACAGATTGC ATAAGCCCCTCATTACAAACTCAGCTTCCTTCGCCATCAAATCCTATCTTGAGGCTGATG GGTAAGGATTTGATGGTGATGAACAACGAAGAGAGTGTGCATCCTCAAGCACCAAGTTCA GACTACATCTTGAGAGGGAATTACGAGGCACCTGTTGGTTTTATGCCTCCAAGCTACCAA CATCTCGGTAATTCTGGATTTATCAGCATGCCACCAACCGCAGCCAGTCACCAGATTCCT CTACCAAGTGTTCAAGCTAGCGGCCTTGTTGCTCCTCCGTTGCACAGCGTTTCCATGATG CAACCTGAACATCATTCCCAGCAGAAGTCCTACAGAAATATTATGCCTGCCATGCATCAT CCAACCTACATGATGAAAGAAGTGATTGTGATCAAGGACTCTCCTGAGCGTAGTAGAACT GAGCCACAAGCTAGCATGCTTTTCCCCCCTGCTCCACCTCCCGCACTCTCGATACCAAAC AATACGCCACCACGTCCATTTTACTGCCTTCCACCGCAAATCCCAATCTTGCCAAGGGAG AGGGCTGCTGGATCCATGCCTGTGTACGCAAACTTTGGCGCATTGGCTGGTGTCAGTCCA TCAAGTCAAGAAAGCCAAACGGGAGTAACCAATCCTTACATGCCGAATCCGTTCTTCGTC CAGTCCCGAACTGGTTACATGAACCACCCGCCAGTGTACTACTCACAGAATCTGGGGTGA

Peptide Sequence

PEP ID	Zm00001d025668_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:10:125572960:125578917:-1 gene:Zm00001d025668 transcript:Zm00001d025668_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:hapless 8
Sequence	MLSSEQPSGPSCSFKSTGPGVSTDPATSVAEGPPSQDPRDLVQPYPKFSISRDYVFASRS KGIKRSWPFHPHSLQLCLERGVKDPLPPFESPDLIRSQPLNISTDFEQSAACLELNSVGL VKNRDASSLNEYTGNINFQSCQPVDESLGPLPYTSPEDGKSGINQVGSTNESDHPDEVIP IDLQDNSCTKASQQIEVDVPLRRLRNLDLSCEPSEKKCKFVVKLGATTDIRRAEDIASNS SSVSDPMASKTCPVCKVFASTSNTTLNAHIDQCLSAESNTELVETVLVKPKVKPRKKRLM VDIYKTALPCTLEDLDQRNGTNWAVELSMSPVSREVCTENRSPEMVSFDRRDDEREGDVY VDSNGIKIRILSKCNDVPLVLRDDLGSRKVAKHGTGKGILMSKKMLKSKLLKNKKLKMHG KKYNKTSPLNSQVQAYPHDDINEETSEEEWHARNPFESTSNCCSRTMQQWVCSKRSDIAK SLSRNHSGKAFDKVIPGAQKSDRNNMLGFNDSQVPESPAGAFSSESPEYMATTSEAIGVE QSNGPSKVLRSIPTWSSKTHRLQSSVMPKTPRSAAALAKRKIKEIGRREATKLDNYNIVR NPTSVKRSETRTLSFTAGPSNGSNRLASTSKKIRKHRSLLRTGKRAFSPFSTRVVHGFGE ERELDTRHVNKKFRITSNEVPKKFLKHTEEDTADNDFSLASDMTVSGQQNDQYDVAQETE GTQMDCEGEDAETDVPYDSVSRSDPADCCNQISDVSLSPENNRTTDDDVLVEGYSVAVED PNSSEKLAHGHESNCATNNEMDEWQMDPTSTKESSPCLVSNRDMGPGGPQDNSSITSNGE NFNQEHGLPLGQDSLDSPVSTASTMSPPAALKDSRINDEEPGPSTGRTVEEQITGCLNQE AKSIPMAREGELPKEKPFRCSCQENISRESHQSVVARPTLNFTGKQVPQLHIGSRASSSF SMYQRTSAKPNPCLDSHEHLSAAKVAAESAVSLPSYSTDCISPSLQTQLPSPSNPILRLM GKDLMVMNNEESVHPQAPSSDYILRGNYEAPVGFMPPSYQHLGNSGFISMPPTAASHQIP LPSVQASGLVAPPLHSVSMMQPEHHSQQKSYRNIMPAMHHPTYMMKEVIVIKDSPERSRT EPQASMLFPPAPPPALSIPNNTPPRPFYCLPPQIPILPRERAAGSMPVYANFGALAGVSP SSQESQTGVTNPYMPNPFFVQSRTGYMNHPPVYYSQNLG

Transcript Sequence

Transcript ID	Zm00001d025668_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:10:125572960:125578917:-1 gene:Zm00001d025668 gene_biotype:protein_coding transcript_biotype:protein_coding description:hapless 8
Sequence	CTGCAGGTGCCTGATGAGAATTGAGATAGTGGGCGGCCAAGGAAGCGAAGTTTCTCGCAC TCCACCTGTTGAATTTACCAACTTGGTATGCTGGAGTGTAAGGATAAGAGCAGACCCAAT TGCTTCACAGCTCTTGGGTTCTTAGTGCCGACTGTAGCAGCAGCAGATCTGGGGCGAGCA GCGAAGGCGTTCATCAGATGTTATCCAGTGAGCAGCCTTCAGGCCCCTCATGTTCCTTCA AGTCTACTGGCCCGGGTGTGAGCACTGATCCGGCAACCTCCGTGGCCGAGGGGCCGCCGA GCCAGGATCCCAGAGATCTGGTCCAACCTTATCCCAAGTTCTCCATAAGCAGAGATTATG TGTTTGCTTCAAGAAGCAAAGGCATCAAGAGAAGCTGGCCTTTCCATCCACATTCATTGC AGCTTTGCCTAGAGCGCGGTGTGAAGGATCCATTGCCTCCATTTGAGTCTCCCGATTTGA TCCGGTCACAGCCATTAAATATTTCCACTGACTTTGAGCAATCTGCTGCTTGCTTAGAAC TCAATAGTGTTGGTCTGGTGAAGAATAGAGATGCTAGTTCCTTAAACGAGTATACAGGCA ATATCAACTTCCAGTCATGCCAACCAGTAGATGAGTCACTTGGACCTTTGCCATACACAT CGCCAGAGGATGGGAAATCTGGTATCAACCAAGTGGGAAGTACAAATGAATCAGATCATC CTGATGAGGTTATACCAATAGATCTACAAGATAATAGCTGTACAAAAGCAAGTCAGCAAA TTGAGGTTGATGTGCCCTTGCGGCGGTTGAGAAATCTTGACTTATCATGCGAGCCATCTG AAAAGAAGTGCAAATTTGTAGTCAAGTTAGGTGCCACGACGGATATTCGGCGAGCAGAGG ATATAGCATCTAACTCTAGCTCAGTTTCAGATCCGATGGCTTCAAAGACTTGTCCTGTTT GCAAAGTATTTGCTTCGACTTCAAACACCACATTGAATGCCCACATAGATCAGTGCCTTT CTGCAGAGTCTAATACTGAGCTTGTTGAAACGGTCCTTGTGAAACCTAAAGTGAAGCCAA GGAAGAAGCGATTGATGGTGGACATATACAAGACTGCTCTTCCATGCACACTTGAGGATC TTGATCAGAGGAATGGCACTAATTGGGCAGTTGAGTTGTCTATGTCTCCAGTGAGCAGAG AGGTTTGCACTGAGAACCGAAGCCCAGAAATGGTATCATTTGACAGAAGAGATGATGAAA GAGAAGGAGATGTCTATGTTGATTCTAACGGCATAAAAATTAGAATTTTGTCCAAGTGTA ATGATGTACCTTTGGTGTTGAGGGATGACCTTGGTTCGAGGAAAGTTGCGAAGCATGGAA CTGGAAAAGGTATACTGATGAGCAAAAAGATGCTGAAGTCAAAGCTTTTGAAGAATAAGA AGCTCAAGATGCATGGAAAGAAGTACAACAAGACAAGCCCTTTGAACTCCCAGGTTCAAG CATATCCACATGATGATATTAACGAGGAAACCTCCGAGGAGGAGTGGCATGCGCGGAATC CTTTTGAAAGCACCAGCAATTGTTGTTCCAGGACTATGCAGCAGTGGGTGTGCTCCAAAC GCTCAGATATCGCCAAGAGTTTAAGCAGAAACCATAGTGGTAAAGCATTTGATAAAGTGA TACCTGGAGCACAGAAATCGGATAGGAACAACATGCTTGGCTTTAATGATTCTCAAGTTC CAGAAAGTCCTGCTGGGGCGTTTTCTTCGGAGTCACCAGAATACATGGCCACAACTTCAG AAGCCATTGGTGTTGAGCAGAGCAATGGTCCTTCAAAAGTGCTTAGATCGATTCCTACAT GGTCTTCAAAAACTCACCGTCTTCAGAGCAGTGTCATGCCAAAAACACCTAGATCAGCTG CTGCTCTTGCAAAGAGAAAAATTAAGGAGATTGGGAGGAGAGAAGCTACCAAATTAGATA ATTACAATATAGTGAGGAATCCCACTTCAGTGAAAAGATCTGAAACTAGGACTCTTTCCT TCACTGCAGGGCCAAGCAATGGATCAAACAGGTTAGCATCTACCTCAAAGAAGATCCGGA AGCATCGATCTCTGTTGAGGACCGGCAAGCGTGCATTTTCACCTTTTAGTACTAGAGTAG TTCATGGTTTTGGTGAAGAGCGTGAACTTGATACCAGACATGTAAATAAGAAATTCCGGA TTACTAGTAATGAGGTTCCCAAGAAGTTTTTGAAGCATACTGAAGAGGATACTGCAGATA ATGACTTCTCTCTTGCAAGTGACATGACAGTATCAGGACAACAGAATGATCAATATGATG TTGCACAGGAAACAGAGGGTACACAAATGGATTGTGAAGGTGAAGATGCTGAAACTGATG TGCCATATGATTCTGTATCCAGAAGTGATCCTGCTGACTGTTGCAACCAAATAAGTGATG TTTCTCTGAGTCCTGAAAATAACAGAACAACAGATGATGATGTTTTAGTTGAAGGCTATA GTGTAGCTGTGGAGGATCCAAACTCCAGTGAGAAATTAGCACATGGGCATGAATCCAACT GTGCTACCAATAATGAAATGGATGAATGGCAGATGGATCCGACTTCAACAAAGGAATCTA GTCCCTGCTTAGTTAGTAACAGGGACATGGGTCCTGGAGGTCCTCAGGATAACTCATCAA TAACATCAAATGGAGAAAACTTTAATCAAGAGCATGGTCTGCCACTCGGACAGGACTCAC TAGATTCTCCTGTATCAACTGCCTCAACTATGTCCCCTCCAGCTGCTTTGAAGGATTCAA GGATTAACGATGAAGAACCTGGCCCATCTACTGGTAGAACTGTTGAAGAGCAAATCACTG GGTGCTTGAATCAAGAAGCCAAGTCAATACCTATGGCCAGAGAAGGTGAACTTCCCAAAG AGAAGCCTTTTCGATGTTCTTGCCAGGAGAACATTTCCAGAGAGTCTCATCAAAGTGTTG TTGCCAGACCAACGCTGAATTTTACTGGAAAGCAGGTTCCGCAATTGCACATTGGTTCGA GGGCATCATCATCTTTCAGCATGTACCAAAGAACCAGCGCAAAGCCCAACCCCTGCTTAG ATTCACATGAACATCTTTCAGCGGCTAAGGTTGCAGCGGAATCTGCTGTCAGCCTCCCTT CTTACTCAACAGATTGCATAAGCCCCTCATTACAAACTCAGCTTCCTTCGCCATCAAATC CTATCTTGAGGCTGATGGGTAAGGATTTGATGGTGATGAACAACGAAGAGAGTGTGCATC CTCAAGCACCAAGTTCAGACTACATCTTGAGAGGGAATTACGAGGCACCTGTTGGTTTTA TGCCTCCAAGCTACCAACATCTCGGTAATTCTGGATTTATCAGCATGCCACCAACCGCAG CCAGTCACCAGATTCCTCTACCAAGTGTTCAAGCTAGCGGCCTTGTTGCTCCTCCGTTGC ACAGCGTTTCCATGATGCAACCTGAACATCATTCCCAGCAGAAGTCCTACAGAAATATTA TGCCTGCCATGCATCATCCAACCTACATGATGAAAGAAGTGATTGTGATCAAGGACTCTC CTGAGCGTAGTAGAACTGAGCCACAAGCTAGCATGCTTTTCCCCCCTGCTCCACCTCCCG CACTCTCGATACCAAACAATACGCCACCACGTCCATTTTACTGCCTTCCACCGCAAATCC CAATCTTGCCAAGGGAGAGGGCTGCTGGATCCATGCCTGTGTACGCAAACTTTGGCGCAT TGGCTGGTGTCAGTCCATCAAGTCAAGAAAGCCAAACGGGAGTAACCAATCCTTACATGC CGAATCCGTTCTTCGTCCAGTCCCGAACTGGTTACATGAACCACCCGCCAGTGTACTACT CACAGAATCTGGGGTGATGATTTCTCAGTAGCTCAAATGACCAGAACTCCATTTAACTTG CCGGTCGTCGCTGTCGAAGTTTGTGGGGGATGAGAGTTTCGTGATGGGTCAAAAACATGC TGAGATCAATGAACCTGCATGAGATGTGTCTGACTTTCATGAGGATTTTCACATAGGTTG CTTTAGATTTTTCCCCCTTTCTTTCTCCCTTAAAGCTACAGCATGTTTGCCGTCAAAAGT ATCTTAATTACTCTCTGCAAAGCTGCAGTAGTAAATTACAGTGTGCAATTCCCAATAGCT CTGCAAAGGAATATATCTCAGTATTT