Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d025651_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:10:125013431:125020123:-1 gene:Zm00001d025651 gene_biotype:protein_coding transcript_biotype:protein_coding description:Poly(A)-specific ribonuclease PARN
Sequence

ATGTTGCATCATGGCCGAACAGTTACATCTTCCACTAATTCTGAAGAGGATGGAGACATG
CCTTTAAAGAGTGCTTCTGATATTCTTTTCACGGAAAGGATGAAAATGAACTTCAAGGAA
TGGCGTGATGCGATAGCCAGCAAGCCAATGGTTGACAACCATTTGTCAGGAAACATTAAA
TGTGGTTCAGGACAATTCCAGACAGTTTTCTTCAAAATGCGCCCTGCTATTATTCTTAAT
GGATTCTCATCACATCAATTGAAGTTAATTCAACAGGTTTTGAGAAAAAACTTTAGGGAT
CTTATTTTTGTCTGTACATTTGGTGAGGATGACACATCTGAAAAGAAAGTAGTTTATTCA
GACACTGATGAGGACAGAATATTATTAATGAAAGATGTGCAGGAAGATCTACTAAAAAAC
AGGGAAGAAAGAATCAAATCAGCAATAGGAATCCGCCATGTCATCGACCTTCTTTCATCA
GAAAGGAAATTGATTGTTGGGCATAGTTGTTTCCTAGATACCAGGCATCTTATGTCTGTC
AATCAAGCAGTTCAGAAACTGATGAAGCACAAAAGCAAATCACTATCTTCAGCTTTCTTA
TTGTTGTGCCCTGCATCTTATTCATCTGTTGAGAAGCCATCCAGTCATTCTCCTGTGACA
ATTGAAGTTGAAGGAGATGAAACGATGTCTTCTCGCTTCATTTCTGGTGCCAAGCATGAA
GCTGGGTACGATGCATACATGACTGGATGCATTTTTGCGCAGTTGTGTGCTTATCTTGGC
ATACAATTTGAGCAGTTCTCACCTCTGGATAACCTAGCAACGAACACTAAGCTGCAGAAA
CACATCAATTTTTTGTCCCCTAGCTGGAACAGTGGAACAGTGCTTGATTTGAGCACTGGC
ATGGAGACACCAGATCCAGGTTATACGAGAAGGTACCCTGCTGCTGTGTATGATAACATT
GTTGTCATCTGGGGATTCCTGTCTAAGGTTAGACCGAAGGAAATTAAGGATTGCATCTGC
AAAGTATTTGGTTCAGGTTCAGTTACAACCGTCTTCTCAATTGATTCCACTGCTGCCCTT
GTGCAGTTCAAGAAACAAGAGTCTGTAAACGATTTCTTGGATTTGAAGGCTGTTTTGGAG
AGGGCAGATAGTGCTATCTCAATTCTACACCCCCTGTCAACTATATTGGAAGGAGGCCAA
ACACGAGCTGCAAAGTATGATACCTACAGAGACATATGCAGCTCTTCTGAATCAAAATAT
CTCTTTGCTGATCAAGCTGAAGCAGTCTGTGCAACCTCAAAGAATCAACTCATAGAAAAT
GTTGATGGCAATCTTATATCTGATGTTCTTGATGGAGTCGCACTCGCCTCTGTAACCGAG
GAAGATGGAATAATACCGAGTTCGAAGAATCAAAACGTTGCTGAAGCTACATGTTAG

Peptide Sequence

PEP ID

Zm00001d025651_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:10:125013431:125020123:-1 gene:Zm00001d025651 transcript:Zm00001d025651_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Poly(A)-specific ribonuclease PARN
Sequence

MLHHGRTVTSSTNSEEDGDMPLKSASDILFTERMKMNFKEWRDAIASKPMVDNHLSGNIK
CGSGQFQTVFFKMRPAIILNGFSSHQLKLIQQVLRKNFRDLIFVCTFGEDDTSEKKVVYS
DTDEDRILLMKDVQEDLLKNREERIKSAIGIRHVIDLLSSERKLIVGHSCFLDTRHLMSV
NQAVQKLMKHKSKSLSSAFLLLCPASYSSVEKPSSHSPVTIEVEGDETMSSRFISGAKHE
AGYDAYMTGCIFAQLCAYLGIQFEQFSPLDNLATNTKLQKHINFLSPSWNSGTVLDLSTG
METPDPGYTRRYPAAVYDNIVVIWGFLSKVRPKEIKDCICKVFGSGSVTTVFSIDSTAAL
VQFKKQESVNDFLDLKAVLERADSAISILHPLSTILEGGQTRAAKYDTYRDICSSSESKY
LFADQAEAVCATSKNQLIENVDGNLISDVLDGVALASVTEEDGIIPSSKNQNVAEATC

Transcript Sequence

Transcript ID

Zm00001d025651_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:125013431:125020123:-1 gene:Zm00001d025651 gene_biotype:protein_coding transcript_biotype:protein_coding description:Poly(A)-specific ribonuclease PARN
Sequence

GTCTGCCCTTTCCGATGGGACCCTGCCAAGTCCGCCTTCGTTGCCCATCCGCATAACTTC
TTTATCTTCCCTCGCAAGGAGCTCCCTAGTGATTGTTCATCTCATGAGTTTCTTTGTCAG
ACAACTTCAATCGAGTTCCTAGCAAAGTACCAGTTTGATTTCAACACATGCTTCCGTGAA
GGAATATCTTATCTATCCAGAGCACAAGAGGAAGAAGCGCTACAGAAATTTAACATGTTG
CATCATGGCCGAACAGTTACATCTTCCACTAATTCTGAAGAGGATGGAGACATGCCTTTA
AAGAGTGCTTCTGATATTCTTTTCACGGAAAGGATGAAAATGAACTTCAAGGAATGGCGT
GATGCGATAGCCAGCAAGCCAATGGTTGACAACCATTTGTCAGGAAACATTAAATGTGGT
TCAGGACAATTCCAGACAGTTTTCTTCAAAATGCGCCCTGCTATTATTCTTAATGGATTC
TCATCACATCAATTGAAGTTAATTCAACAGGTTTTGAGAAAAAACTTTAGGGATCTTATT
TTTGTCTGTACATTTGGTGAGGATGACACATCTGAAAAGAAAGTAGTTTATTCAGACACT
GATGAGGACAGAATATTATTAATGAAAGATGTGCAGGAAGATCTACTAAAAAACAGGGAA
GAAAGAATCAAATCAGCAATAGGAATCCGCCATGTCATCGACCTTCTTTCATCAGAAAGG
AAATTGATTGTTGGGCATAGTTGTTTCCTAGATACCAGGCATCTTATGTCTGTCAATCAA
GCAGTTCAGAAACTGATGAAGCACAAAAGCAAATCACTATCTTCAGCTTTCTTATTGTTG
TGCCCTGCATCTTATTCATCTGTTGAGAAGCCATCCAGTCATTCTCCTGTGACAATTGAA
GTTGAAGGAGATGAAACGATGTCTTCTCGCTTCATTTCTGGTGCCAAGCATGAAGCTGGG
TACGATGCATACATGACTGGATGCATTTTTGCGCAGTTGTGTGCTTATCTTGGCATACAA
TTTGAGCAGTTCTCACCTCTGGATAACCTAGCAACGAACACTAAGCTGCAGAAACACATC
AATTTTTTGTCCCCTAGCTGGAACAGTGGAACAGTGCTTGATTTGAGCACTGGCATGGAG
ACACCAGATCCAGGTTATACGAGAAGGTACCCTGCTGCTGTGTATGATAACATTGTTGTC
ATCTGGGGATTCCTGTCTAAGGTTAGACCGAAGGAAATTAAGGATTGCATCTGCAAAGTA
TTTGGTTCAGGTTCAGTTACAACCGTCTTCTCAATTGATTCCACTGCTGCCCTTGTGCAG
TTCAAGAAACAAGAGTCTGTAAACGATTTCTTGGATTTGAAGGCTGTTTTGGAGAGGGCA
GATAGTGCTATCTCAATTCTACACCCCCTGTCAACTATATTGGAAGGAGGCCAAACACGA
GCTGCAAAGTATGATACCTACAGAGACATATGCAGCTCTTCTGAATCAAAATATCTCTTT
GCTGATCAAGCTGAAGCAGTCTGTGCAACCTCAAAGAATCAACTCATAGAAAATGTTGAT
GGCAATCTTATATCTGATGTTCTTGATGGAGTCGCACTCGCCTCTGTAACCGAGGAAGAT
GGAATAATACCGAGTTCGAAGAATCAAAACGTTGCTGAAGCTACATGTTAGGATATAGCT
TAGATGCTCTATACGATGGCAAAACATTGTTTGTGCAGACGAATGTGAAGCTAATTACTA
CTATCGACCTTTTTCAGCAGGTTATTGGCCTGGCCTTCTATTTGAGGCTCACTGACTAGG
CCAATATTTTGATGGGTATTCTTTTTACCAGTATCTTTAG