Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d025633_T010
CDS Infomation	cds chromosome:B73_RefGen_v4:10:124648415:124662162:-1 gene:Zm00001d025633 gene_biotype:protein_coding transcript_biotype:protein_coding description:CRM-domain containing factor CFM2 chloroplastic
Sequence	ATGCTCCTCTCATTCTCCCCGCACTTTTCTCCTCTCCTCATCTCCTTGCCCTCGACTTCC GCCTGCAAACCCCACGCCCGCCTCCGTCCCGTCCACGCCTCCGCCTCAGCGTCCACCTCG CCGGAGCTGCTCGGCAAGTCCGCGCTCCGCCGCATCTCCGACAAGCTCCGTAGCCTCGGC TACCTCGAGACCGTCTCCGAGCCCCCCACTCCGGCCCCGAACAAGAGCGGGGACGCCCCC TCCCCCGGCGAGATATTCGTGCCCACCCCGGCCCAGCTTCCGCGCCACCGCGTCGGCTCC ACCCTAGACCCGAGCTGGGCCACGGGCGACGGTGAGGCTAGCTCCACCTCGCGGCAGCGG CGGAGGGGCCGCGGGCGCGATGCGTCGGGGTCACCTTCGGCGCCGCCGTCCGCGGCGGAG TTGGCGCTACCGCGGGACGAACTGCGACGGCTGCAGGGGATCGGAATCAGGGTGAGGAAG CGGCTTAAGGTGGGGAAGGCGGGCATCACCGAGGGGATCGTAAATGGGATACACGAGCGG TGGCGGAACGCGGAAGTCGTGAAGCTCAGGTGCGAGGATGTCTGGGCTATGAACATGAGG CGCACACACGAGATTCTCGAGAGGAAAACTGGAGGCTTGGTCATTTGGAGATCTGGGAGT ACCATCATATTGTACAGAGGAACCAACTATACGTATCCTTACTTCCATCACAGCGAAAGG GTGGATAGTTTTCTCGACAAAGAATCATCAGATCAGAGCAATTCTGGGGACGAGGATGAG ACTAGTTCACAGCATGGTAGCAGTCATGAGAAGAGTAGTGAGAATCCTGTTGTAGCATGC GCAGAACAGATTCATGTTGGAGAGGGGAACAGTCAGACTATAGAATATTTGAATCAGAGC TTAAGCAGAGAGAAAGATACAAATCACCCGGTATCATCTATCAAACGGCTTGTTTTTGAT GCAGATGAGGGAAATTTAGACATTAGAGCTGGAAATCCAAACGAGCAGCATGTGAGATTG CAGGAAAACACTCATCCTGATAGTCCTAATAAGTTTGGTCCTAGAGATCGCTCATCCTTA GTGGCTGGTGTTGGATCTCAAAATAAGTTTCGATTACAGTTGCCTGGGGAGGTCAAACTT GCAGAGGAAGCGGATAAATTACTGGATGGGTTGGGTCCAAGGTTTTCTGGTTGGTGGGGA TATGATCCTGTTCCGGTGGATGCTGATCTGTTGCCAGCTATTGTGCCAGGATACCGTAGG CCTTTTCGCCTGCTTCCTTCCGGTGTGCCGCCTAAGCTAACAGACAGGGAAATGACTATC CTTAGGAGACTAGCTCATGCCTTGCCCTTCCACTATGCACTCGGAAGAAGCAGCAACCTT CAAGGATTGGCTGCATCCATGATCAAGCTATGGGAAAGATGCGAGGTAGCAAAGATTGCA CTCAAGAGAGATGCACACAACACTGACAGTGAGCTCATAACTGAAGAAGTAAAGGAGTTG ACAGGTGGAACCCTATTATCAAGGGATAAGGAGTCGATTGTATTCTACAGAGGGAAAGAT TTCCTCCCCCCAGCTGTCTCTCTGGCAATAGAAAAACGCAGAAAGCTGGGCAGTTCTACA ATCTACAAGGCCAAGCCTGGCATTGAAGAAAGCATGCCTACTCAAAATGACTCTGTACTG AAGGTATCAAGTGATGTCTCGGTACACGTTCGTGAAGAGGGAACTTCTGTCACAGAGAAT AGAGCTGAATCTCTTAATACTGTTGCGAAGGATGTTGAAACCAGATTATCTCAGGCCATA GCAGAGAAAGCAAAAGCTGAAAAACTTATTGAAGAACTAGAAAAGGCATCTCCGCTTTCA AAGGCTGAAGTTAGAGAGACTATATCAGAAGATGAGAGGTACATGTTGAGGAAAGTTGGA TTGAAGATGAAACAATTTCTGCTGCTAGGTCGGAGGGGAGTTTTTGACGGAACTATTGAA AATATGCATCTTCATTGGAAGTATCGAGAACTTGTGAAGATTATATGCAAAGAACACCGC CTTGAAGATGTGGAATACGCTGCTCGAACTCTAGAGGCAGAGAGTGGCGGTATTTTGGTG GCAGTGGAAAAAGTGAGCAAAGGGCATGCTATAATAGTATATAGGGGAAAGAACTACAAG AGACCATCAAAACTCAGG

Peptide Sequence

PEP ID	Zm00001d025633_P010
PEP Infomation	pep chromosome:B73_RefGen_v4:10:124648415:124662162:-1 gene:Zm00001d025633 transcript:Zm00001d025633_T010 gene_biotype:protein_coding transcript_biotype:protein_coding description:CRM-domain containing factor CFM2 chloroplastic
Sequence	MLLSFSPHFSPLLISLPSTSACKPHARLRPVHASASASTSPELLGKSALRRISDKLRSLG YLETVSEPPTPAPNKSGDAPSPGEIFVPTPAQLPRHRVGSTLDPSWATGDGEASSTSRQR RRGRGRDASGSPSAPPSAAELALPRDELRRLQGIGIRVRKRLKVGKAGITEGIVNGIHER WRNAEVVKLRCEDVWAMNMRRTHEILERKTGGLVIWRSGSTIILYRGTNYTYPYFHHSER VDSFLDKESSDQSNSGDEDETSSQHGSSHEKSSENPVVACAEQIHVGEGNSQTIEYLNQS LSREKDTNHPVSSIKRLVFDADEGNLDIRAGNPNEQHVRLQENTHPDSPNKFGPRDRSSL VAGVGSQNKFRLQLPGEVKLAEEADKLLDGLGPRFSGWWGYDPVPVDADLLPAIVPGYRR PFRLLPSGVPPKLTDREMTILRRLAHALPFHYALGRSSNLQGLAASMIKLWERCEVAKIA LKRDAHNTDSELITEEVKELTGGTLLSRDKESIVFYRGKDFLPPAVSLAIEKRRKLGSST IYKAKPGIEESMPTQNDSVLKVSSDVSVHVREEGTSVTENRAESLNTVAKDVETRLSQAI AEKAKAEKLIEELEKASPLSKAEVRETISEDERYMLRKVGLKMKQFLLLGRRGVFDGTIE NMHLHWKYRELVKIICKEHRLEDVEYAARTLEAESGGILVAVEKVSKGHAIIVYRGKNYK RPSKLR

Transcript Sequence

Transcript ID	Zm00001d025633_T010
Transcript Infomation	cdna chromosome:B73_RefGen_v4:10:124648415:124662162:-1 gene:Zm00001d025633 gene_biotype:protein_coding transcript_biotype:protein_coding description:CRM-domain containing factor CFM2 chloroplastic
Sequence	ACCCAAATGCTCCTCTCATTCTCCCCGCACTTTTCTCCTCTCCTCATCTCCTTGCCCTCG ACTTCCGCCTGCAAACCCCACGCCCGCCTCCGTCCCGTCCACGCCTCCGCCTCAGCGTCC ACCTCGCCGGAGCTGCTCGGCAAGTCCGCGCTCCGCCGCATCTCCGACAAGCTCCGTAGC CTCGGCTACCTCGAGACCGTCTCCGAGCCCCCCACTCCGGCCCCGAACAAGAGCGGGGAC GCCCCCTCCCCCGGCGAGATATTCGTGCCCACCCCGGCCCAGCTTCCGCGCCACCGCGTC GGCTCCACCCTAGACCCGAGCTGGGCCACGGGCGACGGTGAGGCTAGCTCCACCTCGCGG CAGCGGCGGAGGGGCCGCGGGCGCGATGCGTCGGGGTCACCTTCGGCGCCGCCGTCCGCG GCGGAGTTGGCGCTACCGCGGGACGAACTGCGACGGCTGCAGGGGATCGGAATCAGGGTG AGGAAGCGGCTTAAGGTGGGGAAGGCGGGCATCACCGAGGGGATCGTAAATGGGATACAC GAGCGGTGGCGGAACGCGGAAGTCGTGAAGCTCAGGTGCGAGGATGTCTGGGCTATGAAC ATGAGGCGCACACACGAGATTCTCGAGAGGAAAACTGGAGGCTTGGTCATTTGGAGATCT GGGAGTACCATCATATTGTACAGAGGAACCAACTATACGTATCCTTACTTCCATCACAGC GAAAGGGTGGATAGTTTTCTCGACAAAGAATCATCAGATCAGAGCAATTCTGGGGACGAG GATGAGACTAGTTCACAGCATGGTAGCAGTCATGAGAAGAGTAGTGAGAATCCTGTTGTA GCATGCGCAGAACAGATTCATGTTGGAGAGGGGAACAGTCAGACTATAGAATATTTGAAT CAGAGCTTAAGCAGAGAGAAAGATACAAATCACCCGGTATCATCTATCAAACGGCTTGTT TTTGATGCAGATGAGGGAAATTTAGACATTAGAGCTGGAAATCCAAACGAGCAGCATGTG AGATTGCAGGAAAACACTCATCCTGATAGTCCTAATAAGTTTGGTCCTAGAGATCGCTCA TCCTTAGTGGCTGGTGTTGGATCTCAAAATAAGTTTCGATTACAGTTGCCTGGGGAGGTC AAACTTGCAGAGGAAGCGGATAAATTACTGGATGGGTTGGGTCCAAGGTTTTCTGGTTGG TGGGGATATGATCCTGTTCCGGTGGATGCTGATCTGTTGCCAGCTATTGTGCCAGGATAC CGTAGGCCTTTTCGCCTGCTTCCTTCCGGTGTGCCGCCTAAGCTAACAGACAGGGAAATG ACTATCCTTAGGAGACTAGCTCATGCCTTGCCCTTCCACTATGCACTCGGAAGAAGCAGC AACCTTCAAGGATTGGCTGCATCCATGATCAAGCTATGGGAAAGATGCGAGGTAGCAAAG ATTGCACTCAAGAGAGATGCACACAACACTGACAGTGAGCTCATAACTGAAGAAGTAAAG GAGTTGACAGGTGGAACCCTATTATCAAGGGATAAGGAGTCGATTGTATTCTACAGAGGG AAAGATTTCCTCCCCCCAGCTGTCTCTCTGGCAATAGAAAAACGCAGAAAGCTGGGCAGT TCTACAATCTACAAGGCCAAGCCTGGCATTGAAGAAAGCATGCCTACTCAAAATGACTCT GTACTGAAGGTATCAAGTGATGTCTCGGTACACGTTCGTGAAGAGGGAACTTCTGTCACA GAGAATAGAGCTGAATCTCTTAATACTGTTGCGAAGGATGTTGAAACCAGATTATCTCAG GCCATAGCAGAGAAAGCAAAAGCTGAAAAACTTATTGAAGAACTAGAAAAGGCATCTCCG CTTTCAAAGGCTGAAGTTAGAGAGACTATATCAGAAGATGAGAGGTACATGTTGAGGAAA GTTGGATTGAAGATGAAACAATTTCTGCTGCTAGGTCGGAGGGGAGTTTTTGACGGAACT ATTGAAAATATGCATCTTCATTGGAAGTATCGAGAACTTGTGAAGATTATATGCAAAGAA CACCGCCTTGAAGATGTGGAATACGCTGCTCGAACTCTAGAGGCAGAGAGTGGCGGTATT TTGGTGGCAGTGGAAAAAGTGAGCAAAGGGCATGCTATAATAGTATATAGGGGAAAGAAC TACAAGAGACCATCAAAACTCAGG