Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d025616_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:10:124037257:124039095:1 gene:Zm00001d025616 gene_biotype:protein_coding transcript_biotype:protein_coding description:30S ribosomal protein 3 chloroplastic
Sequence

ATGCTCCCAATGGCCGTCCACCCCACCACCACGCCGGCCTTGTCCCCGCGCGCCCGCGTC
TCGCCGCACAGGCCTCCCATCTCCTCCCTGGCGGACCCCTCGTCCTCCCCCTGCCATCGC
ATCGTCAGTTTCAAAAGCAGGAGGCTGCCACTTCGCTCTCTCCACATCGCCGCTGCCGCT
GCCGCCGGGGCAGAGGAAGAAGAGGCGCAACTAGGTGGAAGTGTGAACGCGGTCGACGAG
GAGGAAGCGGAGAATAAGGTGGTGGTGCCCGAGAGACAGGACCCGATGCTGGTACTCAAG
TTCATCTGGATGGAGAAGAACATCGGCATAGCACTCGACCAGCTGGTTCCTGGCTATGGC
AGCATCCCGTTGAGCCCGTACTACTTCTGGCCGCGGAAGGACGCGTGGGAGGAGCTTAGA
GCCAAGTTGGAAGAGAAAGAGTGGATCTCGCAGAAGCAGATGATCATCCTTCTCAACCAG
GCCACCGATATCATCAACCTCTGGCAGCAGGGTGGTGGGAACCTGTCGACATGA

Peptide Sequence

PEP ID

Zm00001d025616_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:10:124037257:124039095:1 gene:Zm00001d025616 transcript:Zm00001d025616_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:30S ribosomal protein 3 chloroplastic
Sequence

MLPMAVHPTTTPALSPRARVSPHRPPISSLADPSSSPCHRIVSFKSRRLPLRSLHIAAAA
AAGAEEEEAQLGGSVNAVDEEEAENKVVVPERQDPMLVLKFIWMEKNIGIALDQLVPGYG
SIPLSPYYFWPRKDAWEELRAKLEEKEWISQKQMIILLNQATDIINLWQQGGGNLST

Transcript Sequence

Transcript ID

Zm00001d025616_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:124037257:124039095:1 gene:Zm00001d025616 gene_biotype:protein_coding transcript_biotype:protein_coding description:30S ribosomal protein 3 chloroplastic
Sequence

AAGATAAGGAGGCTCTCGCCGTCTCGCACAGGCTCGTTGTTCCTCTTATCCGCGGAGGAA
GAACCTTGGCCCGACACCATGCTCCCAATGGCCGTCCACCCCACCACCACGCCGGCCTTG
TCCCCGCGCGCCCGCGTCTCGCCGCACAGGCCTCCCATCTCCTCCCTGGCGGACCCCTCG
TCCTCCCCCTGCCATCGCATCGTCAGTTTCAAAAGCAGGAGGCTGCCACTTCGCTCTCTC
CACATCGCCGCTGCCGCTGCCGCCGGGGCAGAGGAAGAAGAGGCGCAACTAGGTGGAAGT
GTGAACGCGGTCGACGAGGAGGAAGCGGAGAATAAGGTGGTGGTGCCCGAGAGACAGGAC
CCGATGCTGGTACTCAAGTTCATCTGGATGGAGAAGAACATCGGCATAGCACTCGACCAG
CTGGTTCCTGGCTATGGCAGCATCCCGTTGAGCCCGTACTACTTCTGGCCGCGGAAGGAC
GCGTGGGAGGAGCTTAGAGCCAAGTTGGAAGAGAAAGAGTGGATCTCGCAGAAGCAGATG
ATCATCCTTCTCAACCAGGCCACCGATATCATCAACCTCTGGCAGCAGGGTGGTGGGAAC
CTGTCGACATGAGTCCCTCCCCGCCCTGTTCTTTCAACCGTGCAAAGCTTGCGTTTTGTT
GGTTTCACTACAGGCTCTCTCTGTTGTTAATGTTAAAAGTATGGTACATGGCCTTGTAGA
TCGGTTCAAACTGTTCTCAGGTATGGCCTTTTCCATGGAAATCATCTTGTGATTTATCTT
AGTTATTATGTGTAT