Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d025588_T023
CDS Infomation	cds chromosome:B73_RefGen_v4:10:123300287:123302351:-1 gene:Zm00001d025588 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pectin methylesterase1 description: pectin methylesterase1
Sequence	ATGGCAAAGGCTCTCCTAGGTGGCCTATCGGCGATCCTCGTCGTGGCGGTGGTCGTCGGT GTGGTCGCCACCGTCACCCGCTCCGGCAAGAAGGCCGGCGACAACTTCACGGTCCCGGGG GAGGCTTCCCTTGCCACGTCCGGCAAGTCGGTCAAGTCCCTGTGCGCGCCCACCCTATAC AAGGAGTCGTGCGAGAAGACACTGTCCCAGGCCACCAATGGCACCGAGAACCCCAAGGAG GTGTTCCACAGCGTGGCCAAGGTGGCGCTGGAGTCGGTCCAGACGGCGGTCGAGCAGTCC AAGTCGATCGGCGAGGCCAAGGCCAGCGACTCCATGACCGAGAGCGCGCGCGAGGACTGC AAGAAGCTCCTGGAGGACGCCGCCGACGACCTGAGGGGCATGCTCGAGATGGCCGGCGGC GACATCAAGGTGCTGTTCAGCCGGTCCGACGACCTCGAGACCTGGCTCACGGGCGTCATG ACGTTCATGGACACCTGCGTCGACGGCTTCGTCGACGAGAAGCTCAAGGCCGACATGCAC TCCGTGCTGCGCAACGCCACCGAGCTCAGCAGCAACGCGCTGGCCATCACCAACAGCCTC GGCGGGATCCTGAAGAAGATGGACCTCGGCATGTTCAGCAAGGACTCGCGCCGCCGACTG CTGTCGTCGGAGCAGGATGAGAAGGGCTGGCCCGTGTGGATGCGGTCGCCGGAGAGGAAG CTGCTGGCGTCGGGCAACCAGCCCAAGCCGAACGCGATCGTGGCCAAGGACGGCAGCGGG CAGTTCAAGAGCATCCAGCAGGCCGTGGACGCCGTGCCCAAGGGCCATCAGGGGAGGTAC GTCATCTACGTGAAGGCCGGCCTCTACGACGAGATCGTCATGGTCCCCAAGGACAAGGTC AACATCTTCATGTACGGCGACGGGCCTAAGCAAAGCCGCGTGACCGGCCGCAAGAGCTTC GCCGACGGCATCACCACCATGAAGACCGCCACCTTCTGTGAGCAGATGTTCTTTACCAAT TACCACCATTTAATTAATTAG

Peptide Sequence

PEP ID	Zm00001d025588_P023
PEP Infomation	pep chromosome:B73_RefGen_v4:10:123300287:123302351:-1 gene:Zm00001d025588 transcript:Zm00001d025588_T023 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pectin methylesterase1 description: pectin methylesterase1
Sequence	MAKALLGGLSAILVVAVVVGVVATVTRSGKKAGDNFTVPGEASLATSGKSVKSLCAPTLY KESCEKTLSQATNGTENPKEVFHSVAKVALESVQTAVEQSKSIGEAKASDSMTESAREDC KKLLEDAADDLRGMLEMAGGDIKVLFSRSDDLETWLTGVMTFMDTCVDGFVDEKLKADMH SVLRNATELSSNALAITNSLGGILKKMDLGMFSKDSRRRLLSSEQDEKGWPVWMRSPERK LLASGNQPKPNAIVAKDGSGQFKSIQQAVDAVPKGHQGRYVIYVKAGLYDEIVMVPKDKV NIFMYGDGPKQSRVTGRKSFADGITTMKTATFCEQMFFTNYHHLIN

Transcript Sequence

Transcript ID	Zm00001d025588_T023
Transcript Infomation	cdna chromosome:B73_RefGen_v4:10:123300287:123302351:-1 gene:Zm00001d025588 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pectin methylesterase1 description: pectin methylesterase1
Sequence	AAATCCAGAACGGAAGACCCATTGACTAGGTCCTTACCTCTCAAATAGACAGACTATTCT TCTCCACATCAAAATATAGGGACTCCCGATGCAACAAACACGGGCCACCACACAACAATG GTGAAATGACCATGCATGCATCCACGTCCGTACGCAGCCATTTCGTCTATAAATTTGCTT CCCATCCGATTCAACTACAAGCTTGCGGGCAAAAATGGCAAAGGCTCTCCTAGGTGGCCT ATCGGCGATCCTCGTCGTGGCGGTGGTCGTCGGTGTGGTCGCCACCGTCACCCGCTCCGG CAAGAAGGCCGGCGACAACTTCACGGTCCCGGGGGAGGCTTCCCTTGCCACGTCCGGCAA GTCGGTCAAGTCCCTGTGCGCGCCCACCCTATACAAGGAGTCGTGCGAGAAGACACTGTC CCAGGCCACCAATGGCACCGAGAACCCCAAGGAGGTGTTCCACAGCGTGGCCAAGGTGGC GCTGGAGTCGGTCCAGACGGCGGTCGAGCAGTCCAAGTCGATCGGCGAGGCCAAGGCCAG CGACTCCATGACCGAGAGCGCGCGCGAGGACTGCAAGAAGCTCCTGGAGGACGCCGCCGA CGACCTGAGGGGCATGCTCGAGATGGCCGGCGGCGACATCAAGGTGCTGTTCAGCCGGTC CGACGACCTCGAGACCTGGCTCACGGGCGTCATGACGTTCATGGACACCTGCGTCGACGG CTTCGTCGACGAGAAGCTCAAGGCCGACATGCACTCCGTGCTGCGCAACGCCACCGAGCT CAGCAGCAACGCGCTGGCCATCACCAACAGCCTCGGCGGGATCCTGAAGAAGATGGACCT CGGCATGTTCAGCAAGGACTCGCGCCGCCGACTGCTGTCGTCGGAGCAGGATGAGAAGGG CTGGCCCGTGTGGATGCGGTCGCCGGAGAGGAAGCTGCTGGCGTCGGGCAACCAGCCCAA GCCGAACGCGATCGTGGCCAAGGACGGCAGCGGGCAGTTCAAGAGCATCCAGCAGGCCGT GGACGCCGTGCCCAAGGGCCATCAGGGGAGGTACGTCATCTACGTGAAGGCCGGCCTCTA CGACGAGATCGTCATGGTCCCCAAGGACAAGGTCAACATCTTCATGTACGGCGACGGGCC TAAGCAAAGCCGCGTGACCGGCCGCAAGAGCTTCGCCGACGGCATCACCACCATGAAGAC CGCCACCTTCTGTGAGCAGATGTTCTTTACCAATTACCACCATTTAATTAATTAGCCACA TGTCTCATGCAAGAACAACTGCCGGTTCGACGCGTTCCAGGACACGCTGTACGTGCACGC GCGGCGGCAGTTCTTCCGCAACTGCGTGGTCTCCGGCACCATCGACTTCATCTTCGGCAA CTCGGCGGCGGTGTTCCAGAACTGCCTCATCGGACGGAAGGAGGCCGAGCCGTTCACCGC CGGGCCGTTCATCGACGGCGCCATGTGGCTCAAGTACACCGGCGCGCCGCACATACTTGG TTTCAAGTTCTAAAGGCCGCATGGCATGGCATACATCACATCATATATAGTGAGGTGGCA CACAC