Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d025575_T008
CDS Infomation	cds chromosome:B73_RefGen_v4:10:122821856:122829860:-1 gene:Zm00001d025575 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:synaptonemal complex protein ZIPPER1 description: synaptonemal complex protein ZIPPER1
Sequence	ATGAATAAGGGACACATTCTGGAAATTAAAAAACTATGCCAGGACAACAAGGATCTTAAT GAATTGTTTAGCAGCTTCATGGTTAAAGTAACTGAGCTAGATAAAGAACATGCCTCTATG TCAAGTCATGTGTCTAGGCTGATTTCTTCATTTGAAAGATTCTATGAAATGGCCCAAGAG GAGAAAATGCTAATGGCAAGATCTTCTAAGGATAAATTTGAACATCTTCAAAGCCAGTAT GTAGATTTGACATCAGAAAACAATGCTCTCAAAACTGAAATTGAAGAACTGAAGTCCAGA CTCATAGAGTTGCAGAGAACTCAAGAAATTGTTATGGTTCAACATGTTGAAGAATGCCAA GTGGCTGAAGATAAGATCAGAAGATTAGAGTCTGAAGCTGAAGTTTCTGCCTCCAACATA AATCAGTTAGAAAAATTAGCTTCAGAACTACAAGGGAGAATTCAGAAGTTACTAGAAGAT TCTACCTTTGCTGAAAATCACAAGCAAGAGTTGCTTCAAAAGATTTTGAAGCTAGAATCA GATAATCAGGAACTCCTAGGACAAATGCAGTCCATTATGGAAGAGAAATCAAATAATGCT GAATCTCTGCATGGAGAGATAACTAAGCGTGACCAGCAGGTTGATACACTTGAGAATCAG ATCAACCAGCTTCGTAGTGTTCTGGATGAGAAGGAGCAACTCTATCTTTGTTCTGTACAA AAAGAGAAGACTTTGGAGGAACAGAAATTACAGGTCGAAGCATTGCTTTCTGCAACAGAG TGCAAACTTAGTGATGCAAAAAAACAGTATGATTTGATGCTTGAAGGCGAAAAGATAGAG CTATCCAAGCATTTGAAAGAGCTATCTCTCAAAAATGACCAGGCGATCAATGAAATCCGT AAGAAATATGAACTTGAAAAGATTGAAATTACTAATGCTGAAAAAGAAAAGGCAGAAAAG CTCATAAGGGAAATTGAAAACAAATGCAACGAAAAGATATCACAGAACAAGCATGATTCT CAGAGGTATTTGATTTGCCTTAAGGAGGAACATGGCACAACGGTGGCGAGAATTCAGCAG GATAATGAGCATAAAGAGTCAACTCTCCGGGCTTATCACAAAGAAGAACTGCAGCGCATT CAATCTCAGGCTGAGAATGAAATGAGGGAGAGGTTGTCATTGCTCAGAAAAGAGCATGAA GTTCAAATAAAATCACTAAGGATGCATCATGAGGAAGAATGCCAGAGGATGCAGGAGGAA CTGGAGCTTCAGAAGTCCAAGGAGGAGAAGCAAAGAGCATTGTTACAATTACAGTGGAAA GTAATGGGAGAAAGTCAACGAGTTGATCAAGAAGTGAACTCTAAGAAGGTTCCGTCTATT CACTAA

Peptide Sequence

PEP ID	Zm00001d025575_P008
PEP Infomation	pep chromosome:B73_RefGen_v4:10:122821856:122829860:-1 gene:Zm00001d025575 transcript:Zm00001d025575_T008 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:synaptonemal complex protein ZIPPER1 description: synaptonemal complex protein ZIPPER1
Sequence	MNKGHILEIKKLCQDNKDLNELFSSFMVKVTELDKEHASMSSHVSRLISSFERFYEMAQE EKMLMARSSKDKFEHLQSQYVDLTSENNALKTEIEELKSRLIELQRTQEIVMVQHVEECQ VAEDKIRRLESEAEVSASNINQLEKLASELQGRIQKLLEDSTFAENHKQELLQKILKLES DNQELLGQMQSIMEEKSNNAESLHGEITKRDQQVDTLENQINQLRSVLDEKEQLYLCSVQ KEKTLEEQKLQVEALLSATECKLSDAKKQYDLMLEGEKIELSKHLKELSLKNDQAINEIR KKYELEKIEITNAEKEKAEKLIREIENKCNEKISQNKHDSQRYLICLKEEHGTTVARIQQ DNEHKESTLRAYHKEELQRIQSQAENEMRERLSLLRKEHEVQIKSLRMHHEEECQRMQEE LELQKSKEEKQRALLQLQWKVMGESQRVDQEVNSKKVPSIH

Transcript Sequence

Transcript ID	Zm00001d025575_T008
Transcript Infomation	cdna chromosome:B73_RefGen_v4:10:122821856:122829860:-1 gene:Zm00001d025575 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:synaptonemal complex protein ZIPPER1 description: synaptonemal complex protein ZIPPER1
Sequence	GCAGTGAAAGTGAAAAGAACAGTTTGGAGCTTATGAATAAGGGACACATTCTGGAAATTA AAAAACTATGCCAGGACAACAAGGATCTTAATGAATTGTTTAGCAGCTTCATGGTTAAAG TAACTGAGCTAGATAAAGAACATGCCTCTATGTCAAGTCATGTGTCTAGGCTGATTTCTT CATTTGAAAGATTCTATGAAATGGCCCAAGAGGAGAAAATGCTAATGGCAAGATCTTCTA AGGATAAATTTGAACATCTTCAAAGCCAGTATGTAGATTTGACATCAGAAAACAATGCTC TCAAAACTGAAATTGAAGAACTGAAGTCCAGACTCATAGAGTTGCAGAGAACTCAAGAAA TTGTTATGGTTCAACATGTTGAAGAATGCCAAGTGGCTGAAGATAAGATCAGAAGATTAG AGTCTGAAGCTGAAGTTTCTGCCTCCAACATAAATCAGTTAGAAAAATTAGCTTCAGAAC TACAAGGGAGAATTCAGAAGTTACTAGAAGATTCTACCTTTGCTGAAAATCACAAGCAAG AGTTGCTTCAAAAGATTTTGAAGCTAGAATCAGATAATCAGGAACTCCTAGGACAAATGC AGTCCATTATGGAAGAGAAATCAAATAATGCTGAATCTCTGCATGGAGAGATAACTAAGC GTGACCAGCAGGTTGATACACTTGAGAATCAGATCAACCAGCTTCGTAGTGTTCTGGATG AGAAGGAGCAACTCTATCTTTGTTCTGTACAAAAAGAGAAGACTTTGGAGGAACAGAAAT TACAGGTCGAAGCATTGCTTTCTGCAACAGAGTGCAAACTTAGTGATGCAAAAAAACAGT ATGATTTGATGCTTGAAGGCGAAAAGATAGAGCTATCCAAGCATTTGAAAGAGCTATCTC TCAAAAATGACCAGGCGATCAATGAAATCCGTAAGAAATATGAACTTGAAAAGATTGAAA TTACTAATGCTGAAAAAGAAAAGGCAGAAAAGCTCATAAGGGAAATTGAAAACAAATGCA ACGAAAAGATATCACAGAACAAGCATGATTCTCAGAGGTATTTGATTTGCCTTAAGGAGG AACATGGCACAACGGTGGCGAGAATTCAGCAGGATAATGAGCATAAAGAGTCAACTCTCC GGGCTTATCACAAAGAAGAACTGCAGCGCATTCAATCTCAGGCTGAGAATGAAATGAGGG AGAGGTTGTCATTGCTCAGAAAAGAGCATGAAGTTCAAATAAAATCACTAAGGATGCATC ATGAGGAAGAATGCCAGAGGATGCAGGAGGAACTGGAGCTTCAGAAGTCCAAGGAGGAGA AGCAAAGAGCATTGTTACAATTACAGTGGAAAGTAATGGGAGAAAGTCAACGAGTTGATC AAGAAGTGAACTCTAAGAAGGTTCCGTCTATTCACTAAGTTTGGATACGTTCATAACTAA GTGATGTACATGTCACATGCATTCAATGTTTGTTTTAGTATATTGATTGCATAACATGCT AAGTTTTGAACATAATTATGTAGTCACATATGTTCTCACTAAGTAAGGTCAATTGTCTCA CAGAATGGATCCCTTGTGCAAATAGTTTTTTGTAGGTTCTAGATTAATCAGAAAATATTT TTTATAGGTTCTGCATTCTAACGTAGTGTTCTGCGAAAAGGGCCTGTAGCCTAGTGGTTA AAAGTTTCCTAGTAGCACCTCCAAGTCCCGGGTTCGATTCCTTTCGGGGGCGAATTTTCC GGTTTAGTTAAAAAAATCTTCTCGCTATGCCCCATCCGCTCTCGGGTTACGATGTCTTGT GCGCCACTTTTCGTTTGGCTCGTTGCAGAGTGGACGGTTGGCGCTGGTCCGTTAGTGATG GGAGGCCAAAGTTCGGGGATTTTCTCGGCCGTGACCATTGTTTTTGTCTCTTAGTATAAT ACCGGGAGTGCGGTCATTCCCTCATTGACCGAGTTTTTTTCTGCCCCTACTGAGAGGTTC AAATTGACGAACTAACTTAATGGTATTACGCTACTATGGCTCTACACCTTTGTGGTTTGT GATTTCATACACATTTAATTGGGCCTTATTCTGATTGGATTGCAATAGCTGTTTTACACC CTTCGATGTGTTTTATTTCATGTTATTTGGAAAAGCAAGTGTAAAGCATCTATAACAGTT AAAGTAGTATCATGTTTGGAATGCACATATGGTCCAGTGGCACTAATGAAAGAATATGTT ATTTTATTTTCAATTTGGCCATGCAATCAATCATTAATTCGAACAGAAATCAAATATAAC CATTAGTTTCATTTCTGGTTTTAAATCTTACATGGACATACTGCAGCATGGTTTGCTGTG CACTTTTGTCAGTTCATCTTCTTTGTATTCATTATATGCTTTGATTTATTTTTTTTGCAT GGACTATGGACAAAGTAATATTTCAACCTCTTTTGTTTTTTTAACGTAATGGCAGAAGCT CTGTGTTTCATTTAAGAAGAATGGAATTGACCTAGTTTTAAGGAAAACCGGGTCCGAAAC CTACACACAACGCACAAACAACCCAGACAATGACAACCTCACACACAAATCCCATCTAGA GTCATCGTTGCCGAGCTCAACACAAGGTATGAGCAGTCTGACTCTGCAAGACGGGCCACA CATGGCCGAATGAACTCGATGACGCCTACACCCAAAACCCGCACAGGAGGAGGAAGACTG CGGTGCACCATCGTTGCCAAGCCTCAACACCCCACGCGAGGCAGCTCCGATTCTTCACCA ACGAGCTTGATCCTCCGCCCCGCCCCCGGCATTTGCCCAACCTCCAAACAATACTAGTCC ACAAGGAAGAGGGGGGGGGGGGTTCGCCTCATGTCATCGTTGCCGAGCCACATCCCCTGA TGTAGCAGTTTCGACTTTAGTACTTCACGTTGCAATACCCCCACCCGCATACTAGCCACC GAAAAGCGAAAGCATCAACCGAAGTCGACGTCGTGGTTGAGACAACCTTCAATAGCGACG CCTTCAGGAAGGGGGTGACATCTGGGATGCCACCATCGCATGTTCGAGATAGACCGGGCT TTTGCCCACTGAAGATAGTGCTGGGGAATGCGATACCTCAACAGGGGAAGCGGCGCCCAC GACTGTCATCTCGTTGAGGCTTTCACCATCGGTGTCCCCCAGCACCACGCCGGACCCTCG GGTTAAAGCAAGCAGCCACTGCTGTTGCCGCTGCCAGGCATCCCGCACAAACCCCTCTAT AGGGGTAACGACGTGCCGGCTGCCGCATCAGCCGCAAAGTTGCGTCGGTCGCCACCCCCT TCGACTAAGCACACGAAACACCTTGCCGTGTGCGCCAGACTTCTGCGCGCTAGAGCTGAA TCCGGCTGCCACCAGTCGGCTCTGGCACCCACGGCCAGCGAAGCCAGCTGCCACCGAGCG CACCGCTGCCGTCGCCACCAACCTGCGCCTGACCTGGTCACTGGTTGCTGCCTCCATCTC ACCAAACGATAGAAGGGCCCCACCACCGCCATCCCGGTCAGCGCGCAGCCCTGTCGACGC ATCACACCGGGCCACGAACGCCTCTCCAACCTTGCAGCCACCCAATGCCCAAGCAGACCC CAACCTGCAAGGACCACCACCACCAAGCGCAGATCTGCGAGGGAGGGCCAGGTCCAGGTC GATGGGCCCAGATCCGCCGGAATCGCATGAGCCACCGCTGAACAAAGCCCACACGACCCA CGCCACCCTGCCTCTGCTGCCGCGCACTAAGCGGGCCAAACGTGCGAGTGCCGCCGACGC GTGCTGGCCACGCGAGCGGGCAAGGGAAGCAGCAGGCGCCGGCTGAAACGCCTCGCCGCC ACCTTCACCGCGAGCCGTGCGAGCAACCCGCCAGCTAGCTCCAGCGGCGGCAAGGCAGAG AGGGGAGGGAGGGAGGCGAGGTGGCGGCGGCTTAGGGCTAGAGCCGCTTGAGTCGCCCGA GCGGGGTGACGCGGGGGCCTTCTCCAATTTCTCTTCCTCTCCTTTTCAATCTCTTTTGTT CTGCACTGGGTTGCTTTGGCACATTTTGATTTTCATTTGATTGTAATCCTAGTTATGTAC TTTTGTTGCTAGCAAATATCTGAACAAAATCTTAATTCAATGCATGTATATTCGATTTTC CTGAGACTAGTAGCTGTGTTTCATATTTGTCATCCTGATCATAATTTCTCTCTAAATGTT ATCACTAATTTTTTAGACGAATCAATGATGAGAATATTTTGGTTCATCTATCTTGATTAG AAGGAAATACTCTGATAGTTAAGGAACTAAATTGCAAGGTTATTTTTCATCTAGATTGTG GCGAAGTGATTTTTTTTAAAAAATTGTTATAAAATGCATATGCAGTTTCAACATGTTGGA AGCACAAGGCTGGTCCAGATTCCTATCTTGAATTTTTTCTGTTTAAGTGAGACATCAGTT GCTTCTCCTTTCTATACCTGGTAACTGTTACTCAGTCCTTACGAAGTGCATAGATTTTTC AGGAATACTCTGTTTCGTCGATTAGGAGGAGCGACCCATATGGAAGAAAAGAACAAGAGG TCCAGTTGGTAAGTCCGGAGACCAATCGGAAGGACGTAAACTTACCTGGGATTTTACAAT CACCAATTTCGAACATGTTGAGAAAGGTAGAGAAAGTGTCTCAGGATATTCCTAAACATA GAAAGGTAACCCACCATGAATACGAAGTTGAGACAGCAAATGGAAGAATCACAAAGCGCA GGAAAACTAGGAGCACTGTCATGTTTGGTGAACCGAACTCTCAGAAACCATTGCATAATA CTACTGACAAAGATGTTAAAAAACTAAAAAAGGTTCCTACAAGATCCCGTGCACATCCTG CAAACATTGGTGAATTATTCTCTGAGGGTTCCTTGAATCCGTATGCTGACGACCCTTATG CTTTTGACTAGAAGCTCACGCCTGGAAGTATCATTTTTGCAAGCACGATGACGAATTCTG GAACACACAATTACCACCACCGTGTTGGGTCAATCCTACGGCTTTTCCCTGGTCATCCGT CCATCATAATGTACATGACTGCCGTTGACTCATGTATCTCTGAAGTATTGCTACTGCAAC AACCATCACGATTGTCGGATATGTAGGTGTAGATTTGTGAATGAACTGTACATGCCATAA CTACGGAGTAACTGAATATC