Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d025508_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:10:120809943:120810596:1 gene:Zm00001d025508 gene_biotype:protein_coding transcript_biotype:protein_coding description:Class IV heat shock protein

Sequence

ATGTCGAGGAGAGCCGCAGCAGCGCTCGCGCTCGCGTGCCTCGCCGTGATGGCGGCGGCA
CTGGCGGACGGCGCGCTGCTCCCGTGGTTCGGCGAAGGGAGGCGCGGGGGCGACGAGGCC
GCGGCGGCGGCGGCGTCTCCGCTGTCCGGGCCCGGGGTGGGCCTCCTGGCCGACCCGTTC
CGGATCCTGGAGCACGTCCCCTTGGGCTTCGACCGGGACGACGTGGCCATGGTCTCCATG
GCGCGCGCGGACTGGCGCGAGACTCCCGACGCGCACGAGATCGTGGTGGACGTGCCCGGG
ATGCGCAGGGAGGACCTCAAGATCGAGGTGGAGGACTACAGCCGGGTGCTGCGAGTCAGC
GGCGAGCGGCGGCGCGCGGAGGAGCACAGGGGCGACCACTGGCACCGCGAGGAGCGCTCC
CACGGCAGGTTCTGGCGCCAGTTCCGCCTCCCCGAGAACGCCGACCTCGACTCCGTCGGC
GCCAGCCTCGACAACGGCGTCCTCACCGTGCGGTTCCGGAAGCTGGCCCCCGAGCAGGTC
AAGGGCCCGCGCGTCGTTGGGATTGCCGGGGGAGACGGTGACGGCGACGCGAAGAAGAGT
ATTGGCGGCGGCGCCGGGGATGGTCATCATCAGACCAAGAAGGTGGAGCTCTGA

Peptide Sequence

PEP ID

Zm00001d025508_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:10:120809943:120810596:1 gene:Zm00001d025508 transcript:Zm00001d025508_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Class IV heat shock protein

Sequence

MSRRAAAALALACLAVMAAALADGALLPWFGEGRRGGDEAAAAAASPLSGPGVGLLADPF
RILEHVPLGFDRDDVAMVSMARADWRETPDAHEIVVDVPGMRREDLKIEVEDYSRVLRVS
GERRRAEEHRGDHWHREERSHGRFWRQFRLPENADLDSVGASLDNGVLTVRFRKLAPEQV
KGPRVVGIAGGDGDGDAKKSIGGGAGDGHHQTKKVEL

Transcript Sequence

Transcript ID

Zm00001d025508_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:120809943:120810596:1 gene:Zm00001d025508 gene_biotype:protein_coding transcript_biotype:protein_coding description:Class IV heat shock protein

Sequence

ATGTCGAGGAGAGCCGCAGCAGCGCTCGCGCTCGCGTGCCTCGCCGTGATGGCGGCGGCA
CTGGCGGACGGCGCGCTGCTCCCGTGGTTCGGCGAAGGGAGGCGCGGGGGCGACGAGGCC
GCGGCGGCGGCGGCGTCTCCGCTGTCCGGGCCCGGGGTGGGCCTCCTGGCCGACCCGTTC
CGGATCCTGGAGCACGTCCCCTTGGGCTTCGACCGGGACGACGTGGCCATGGTCTCCATG
GCGCGCGCGGACTGGCGCGAGACTCCCGACGCGCACGAGATCGTGGTGGACGTGCCCGGG
ATGCGCAGGGAGGACCTCAAGATCGAGGTGGAGGACTACAGCCGGGTGCTGCGAGTCAGC
GGCGAGCGGCGGCGCGCGGAGGAGCACAGGGGCGACCACTGGCACCGCGAGGAGCGCTCC
CACGGCAGGTTCTGGCGCCAGTTCCGCCTCCCCGAGAACGCCGACCTCGACTCCGTCGGC
GCCAGCCTCGACAACGGCGTCCTCACCGTGCGGTTCCGGAAGCTGGCCCCCGAGCAGGTC
AAGGGCCCGCGCGTCGTTGGGATTGCCGGGGGAGACGGTGACGGCGACGCGAAGAAGAGT
ATTGGCGGCGGCGCCGGGGATGGTCATCATCAGACCAAGAAGGTGGAGCTCTGA