Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d025472_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:10:119894515:119896773:-1 gene:Zm00001d025472 gene_biotype:protein_coding transcript_biotype:protein_coding description:Two-component response regulator ARR16
Sequence

ATGGAAGCAGCGGCAGGAGGAGTGGAGGCGGAGGGGGTGATGAGGGTGCTGGTGGTGGAC
GACTCCCCCGTCGACCGCCGGGTGGCGCAGCTGCTTCTCAGCAGCGACTCCTGCGCCGGC
TCATTCCACGTCATCGCCGTCGACAGCGCGAGGAAGGCGATGGAGTTCCTCGGCCTCAAG
GACGGCGGCGAGGCACTGAACCCCCTGGAGCCGATCCCGGTCGTCGTCATGTCGTCAGAA
GACGAGCCCCAGAGGATCAGCCGATGCCTGAGCGCCGGCGCCGAGGACTTCATCGTGAAG
CCCCTGCAGAGCAAGGACGTGCAGCGCCTCCGGAACTGCTCCGCCGCCGCGAGGCCCAGC
AAGGGCGCCGCGCCGTGCGAGGCCGCCGTCGTGGCCAAGAGGAATCAAAAGCCGCCGCAT
CCTGCCGGCGCCGCGTCGCCGTCTGGACGGCGAGCGAGCCTCGCCGGAGTCGCCATGGTG
CTGCACTCGTCGGGCGTGGAGTACCTGCCGCTCCTGCTCAAGCTCGTCGTGCTGGCGTAC
GCGGCGCTGTGCCTGGGAGAGCTCCTGCACAGGTGGGCGTCGTCGGACGGCCGCTGCTCG
CTCTCCCCGTGGTGCGCCTGA

Peptide Sequence

PEP ID

Zm00001d025472_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:10:119894515:119896773:-1 gene:Zm00001d025472 transcript:Zm00001d025472_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Two-component response regulator ARR16
Sequence

MEAAAGGVEAEGVMRVLVVDDSPVDRRVAQLLLSSDSCAGSFHVIAVDSARKAMEFLGLK
DGGEALNPLEPIPVVVMSSEDEPQRISRCLSAGAEDFIVKPLQSKDVQRLRNCSAAARPS
KGAAPCEAAVVAKRNQKPPHPAGAASPSGRRASLAGVAMVLHSSGVEYLPLLLKLVVLAY
AALCLGELLHRWASSDGRCSLSPWCA

Transcript Sequence

Transcript ID

Zm00001d025472_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:119894515:119896773:-1 gene:Zm00001d025472 gene_biotype:protein_coding transcript_biotype:protein_coding description:Two-component response regulator ARR16
Sequence

GCCGCGCTTTATAAACTTTCGCCGCTGCCGCTGCCCCCCGCTCTGGTTGGCGAGAAAGAG
CAGAGGGACACCGAAACAGAGAGGAGCAGAGGGGAGCGACGACAGGTCAGCGGAGATGGA
AGCAGCGGCAGGAGGAGTGGAGGCGGAGGGGGTGATGAGGGTGCTGGTGGTGGACGACTC
CCCCGTCGACCGCCGGGTGGCGCAGCTGCTTCTCAGCAGCGACTCCTGCGCCGGCTCATT
CCACGTCATCGCCGTCGACAGCGCGAGGAAGGCGATGGAGTTCCTCGGCCTCAAGGACGG
CGGCGAGGCACTGAACCCCCTGGAGCCGATCCCGGTCGTCGTCATGTCGTCAGAAGACGA
GCCCCAGAGGATCAGCCGATGCCTGAGCGCCGGCGCCGAGGACTTCATCGTGAAGCCCCT
GCAGAGCAAGGACGTGCAGCGCCTCCGGAACTGCTCCGCCGCCGCGAGGCCCAGCAAGGG
CGCCGCGCCGTGCGAGGCCGCCGTCGTGGCCAAGAGGAATCAAAAGCCGCCGCATCCTGC
CGGCGCCGCGTCGCCGTCTGGACGGCGAGCGAGCCTCGCCGGAGTCGCCATGGTGCTGCA
CTCGTCGGGCGTGGAGTACCTGCCGCTCCTGCTCAAGCTCGTCGTGCTGGCGTACGCGGC
GCTGTGCCTGGGAGAGCTCCTGCACAGGTGGGCGTCGTCGGACGGCCGCTGCTCGCTCTC
CCCGTGGTGCGCCTGAGCAGCGGTGCGTGTCCTGGGCACCAGCAGGAGACTGGTGATGCA
AATGCAGAGTTTTTCAGCTGCTGAACCAAAAAAAAAAACCTCCAACAGCCGTGGAGGTCT
AGCTTAGCCTTTAATTTAGGCACTGTAGAAGATTGACTGCTTTGGGATTGGGTACGCTCG
CGTCTGCCGTCTGCGTGGCGTTTGTTTCTTGATTTGAGGGAGACGTATGTATGTACGTAC
GATACGAGGCCACGGGGGGTACGCTCCCCTGTATCCTCTCCTCTGTATAGAATCCACTGA
ATCAGAATGCAACGCGTGACCCGAGCCAA