Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d025460_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:10:119207603:119213288:-1 gene:Zm00001d025460 gene_biotype:protein_coding transcript_biotype:protein_coding description:Coiled-coil domain-containing protein 55 (DUF2040)
Sequence

ATGAAGAGGTACGGACTGCAGCTCCGCACGAAGCCGCCATCGTCCTCGTCGTCACGCGCG
CCGCCACCTCCCGCCCGGCCCCTGGCGGCCTTCGCCGACGACGATGACGATGATGTGGAG
GCAGAAATCCTCCGCCAGGCGGCCAAGAAGCGCTCCCTCCAGAAGGTTGAGGAGCAGCAA
AAGAAGGCCATGGAGGAGGATCCCTCGGTGTACGCCTACGACGAGCTGTACGACGAAATG
AAAGAGAAGGAAGCCCGCCCTAAGATGCAGGATAAGGTCGTCCGCGAGTCAAAGTATATT
GCACAACTTAAGGAAAAAGCAGAGCTACGCAAACGAGAACAAGATATAATATACGAGAGG
AAGCTTCAGAAAGAGAGAAGCAAGGAGGACCACCTTTTTGGGGACAAGGATAAATTTGTA
ACATCAGCCTACAGGAAGAAACTTGAGGAGCAGCAAAAGTGGCTTGAAGAAGAAAGAGTG
AGGCAGCTTCGAGAAGAAAAGGAAGATGTAACTAAAAAGAAAGACCTGAGTGATTTTTAC
TTTGGGCTTGTGAAGAATGTTGCTTTCGGTGCACAGACACATGATAACACAAAATCTGGT
CACCCTCTAAAGGCGGACAATAAACCTGAGGATACAAATACTAGTAGCCTTGATGCTGAA
GCCTCTGAACCTTCTCCAAAGCGTAGAAGAGAATCCAGTATAGAATCAGAGAGGACTAAG
AGTATGGATATGGAAGAGCCGTCGGCAAGTCGAATGAGGGATTCAACAGTTGCTGCATCT
ACTGAGAAAAATGCTGCTGATGTTTCATCACATGCTAAAGAGATCCCACAAAACATTCAG
CCAGCAAAGGTTACTGATGATCACTACAAGAGAAGTGATGGCGCACTTGCTGCTGCTAGA
GCGCGAGCACTGGCCCGAAAGAAAGCGAAGGACCAGCAATTGTGA

Peptide Sequence

PEP ID

Zm00001d025460_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:10:119207603:119213288:-1 gene:Zm00001d025460 transcript:Zm00001d025460_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Coiled-coil domain-containing protein 55 (DUF2040)
Sequence

MKRYGLQLRTKPPSSSSSRAPPPPARPLAAFADDDDDDVEAEILRQAAKKRSLQKVEEQQ
KKAMEEDPSVYAYDELYDEMKEKEARPKMQDKVVRESKYIAQLKEKAELRKREQDIIYER
KLQKERSKEDHLFGDKDKFVTSAYRKKLEEQQKWLEEERVRQLREEKEDVTKKKDLSDFY
FGLVKNVAFGAQTHDNTKSGHPLKADNKPEDTNTSSLDAEASEPSPKRRRESSIESERTK
SMDMEEPSASRMRDSTVAASTEKNAADVSSHAKEIPQNIQPAKVTDDHYKRSDGALAAAR
ARALARKKAKDQQL

Transcript Sequence

Transcript ID

Zm00001d025460_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:119207603:119213288:-1 gene:Zm00001d025460 gene_biotype:protein_coding transcript_biotype:protein_coding description:Coiled-coil domain-containing protein 55 (DUF2040)
Sequence

GGAGGCTAGATCTATTTAAACGTCACGGCAGGTTGTATTATAAGTTGTTTGGCCTGATCT
ATACCTAGTATCAGATTGAGTTAGATCAGCCGTTGCCCGTCGGCCGCCGCCCCTCCCTCC
GCGCCCTCCCGACCACCGCTCCTTCCCCGCCTTCCACCTGCGCTGTCCGCCAGTCCTCCT
CCACCTCGCTCCGGCACGCAGGGCCCACAAGAAGCGCCCCTTCCAGAAGTTAATCCGCCC
CGGTTTGACTAGGGTTTGTCCCGTCTCCTAATCGATCAGATTGGCAGGTAACTGCCGTTG
CCGCCGCGATGAAGAGGTACGGACTGCAGCTCCGCACGAAGCCGCCATCGTCCTCGTCGT
CACGCGCGCCGCCACCTCCCGCCCGGCCCCTGGCGGCCTTCGCCGACGACGATGACGATG
ATGTGGAGGCAGAAATCCTCCGCCAGGCGGCCAAGAAGCGCTCCCTCCAGAAGGTTGAGG
AGCAGCAAAAGAAGGCCATGGAGGAGGATCCCTCGGTGTACGCCTACGACGAGCTGTACG
ACGAAATGAAAGAGAAGGAAGCCCGCCCTAAGATGCAGGATAAGGTCGTCCGCGAGTCAA
AGTATATTGCACAACTTAAGGAAAAAGCAGAGCTACGCAAACGAGAACAAGATATAATAT
ACGAGAGGAAGCTTCAGAAAGAGAGAAGCAAGGAGGACCACCTTTTTGGGGACAAGGATA
AATTTGTAACATCAGCCTACAGGAAGAAACTTGAGGAGCAGCAAAAGTGGCTTGAAGAAG
AAAGAGTGAGGCAGCTTCGAGAAGAAAAGGAAGATGTAACTAAAAAGAAAGACCTGAGTG
ATTTTTACTTTGGGCTTGTGAAGAATGTTGCTTTCGGTGCACAGACACATGATAACACAA
AATCTGGTCACCCTCTAAAGGCGGACAATAAACCTGAGGATACAAATACTAGTAGCCTTG
ATGCTGAAGCCTCTGAACCTTCTCCAAAGCGTAGAAGAGAATCCAGTATAGAATCAGAGA
GGACTAAGAGTATGGATATGGAAGAGCCGTCGGCAAGTCGAATGAGGGATTCAACAGTTG
CTGCATCTACTGAGAAAAATGCTGCTGATGTTTCATCACATGCTAAAGAGATCCCACAAA
ACATTCAGCCAGCAAAGGTTACTGATGATCACTACAAGAGAAGTGATGGCGCACTTGCTG
CTGCTAGAGCGCGAGCACTGGCCCGAAAGAAAGCGAAGGACCAGCAATTGTGAAGTACAA
GGCAGAAAAGTTTACCGATCCTTGAGGTACAATTTCATGTTTTATTCAATAGGATCGTGT
AAAGATGTCATCTGAAATGATCTGATAGCTCCCTTGCACTTTAAGAAGCATTTTTTATTG
TGGTTGATGTGTATCTATGTTGTAAAATGACCTCATCAGATGCCATCTTCTGCCAGTAAC
TTTGGTGTTTTGACACGTCAACTGGTTTGAACTTATATGGCCGTGCAATAGACTGTTTTG
CACTGTAGAATGTACTGAGTTTGAAATAGAAAGTGTGATAGTGAGATATACTGCTCAGAA
CATTTCATGAAGTAACCTGGCAAGTATGCAGATGTGTTATTTTTATCAAGCCAATCTTAA
TGGATAGATGTATTTTGTTGTT