Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d025452_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:10:119056904:119059320:1 gene:Zm00001d025452 gene_biotype:protein_coding transcript_biotype:protein_coding description:OSJNBa0006B20.20 protein; protein
Sequence

ATGAGCAGCCAGGGATTCGGTGCGGGGAGCCCCAAGTCCTTCCGCTACCCCAGAGGCGGC
GACTTCGATCTCGAGTCCGGGTCCCCACGCAAGGGCCGCAAGCCCAAGAACCCTCACCTC
GAGACCTCGATCGTCATGAGGATCCGCTACTTCTACGAGGCGCACCCCGTGGCCGTCGCC
CTCATCCTCCTCTCCTTCGGGCTCAGCGTGCTCATCCTCCTCTCCGTGTACGAGACCCGG
TTCAGGACGATGAGGAGCGTCAGTGCGTGGTCCAGTGACGGTGGGGATTATCCATTGCCA
ATGCTCCGGAACCTTGTCATGGTGGCTGGGCATTCGATCTATACGAGCTCAAGATGCGGG
GAGACCGAGAGTGAGAATTCCTGGTTCTTGGAGCCGTACCAGAAGCACGCTGGACAGGCG
GCCACCTTCCTGGCTCACATCAAGGAGGGGGTGGGGATCGCGGCGAGGGATGAGGGGGCA
CTCCTGTTGTTCAGCGGCGGGGAGACGAGGAGAGATGCTGGCCCGAGGAGTGAGGCACAG
AGCTACTGGGCTATTGCCGAGTCGAAAGGATGGTTCGGAAATGATGAGGGTGTAAGAAGC
CGAGCACTCACCGAGGAGCATGCACGAGATAGTTTTGAAAACCTCCTATTTAGTGTGTGC
CGTTTCAGAGAGCTAACTGGAAGATACCCACAGAACATAACTGTTGTTAGCTACGATTTC
AAGGAGGAACGTTTTGCACAACTGCACAGAACCGCACTCGGATTCCCGGAAGGAAGGTTC
TTCTTCTCAGGTACACCAGCTACGCCTTCTGCAAGGGAGGCTGCTCTGAAAGGCGAAGCA
GCTGTCCGAGCTCAGTTCCTTGAAGACCCGTATGGATGTCTAGGATCTCTTCATGTAAAG
AGGCTGAAGCGGGACCCGTTCCACCGAACCATTCCATACCCTGCCGGTTGCCCAGAGCTG
AAGGGTCTGTTCTCCTATTGTGGCCCGGTGCCTTACTCTGGGCACCTCCCTTGGACTGAG
TAG

Peptide Sequence

PEP ID

Zm00001d025452_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:10:119056904:119059320:1 gene:Zm00001d025452 transcript:Zm00001d025452_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:OSJNBa0006B20.20 protein; protein
Sequence

MSSQGFGAGSPKSFRYPRGGDFDLESGSPRKGRKPKNPHLETSIVMRIRYFYEAHPVAVA
LILLSFGLSVLILLSVYETRFRTMRSVSAWSSDGGDYPLPMLRNLVMVAGHSIYTSSRCG
ETESENSWFLEPYQKHAGQAATFLAHIKEGVGIAARDEGALLLFSGGETRRDAGPRSEAQ
SYWAIAESKGWFGNDEGVRSRALTEEHARDSFENLLFSVCRFRELTGRYPQNITVVSYDF
KEERFAQLHRTALGFPEGRFFFSGTPATPSAREAALKGEAAVRAQFLEDPYGCLGSLHVK
RLKRDPFHRTIPYPAGCPELKGLFSYCGPVPYSGHLPWTE

Transcript Sequence

Transcript ID

Zm00001d025452_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:119056904:119059320:1 gene:Zm00001d025452 gene_biotype:protein_coding transcript_biotype:protein_coding description:OSJNBa0006B20.20 protein; protein
Sequence

GTCGACCCCGAGTCCCGACCGGTGCGCGCGCAGGCGCACAGCCAGGACACGACCGAGCAC
GGAGCAACGTCGCCCTCCCCCAGTAGCGCAGCCCGGCCACGCCCTCATCGCCCATCCTGC
CGGGCCGCGTCGCCGACTCGCCGCCAATTACCATTCGCCTCTGCAGACCCGACACGGCGC
GCGGCTCCTCGCCGATTTGTTCCCGGCGGCTCATCAGAAAGGCTTTGGATCTGGCCTTCG
TCTCAGTTCAGCGAGCCGCGAAGAACAGCCTTGATTTGGTGCCCCAAGTGATGTAGTGTG
AGAGGCTAACTTCTTGAGAGCGCGATGAGCAGCCAGGGATTCGGTGCGGGGAGCCCCAAG
TCCTTCCGCTACCCCAGAGGCGGCGACTTCGATCTCGAGTCCGGGTCCCCACGCAAGGGC
CGCAAGCCCAAGAACCCTCACCTCGAGACCTCGATCGTCATGAGGATCCGCTACTTCTAC
GAGGCGCACCCCGTGGCCGTCGCCCTCATCCTCCTCTCCTTCGGGCTCAGCGTGCTCATC
CTCCTCTCCGTGTACGAGACCCGGTTCAGGACGATGAGGAGCGTCAGTGCGTGGTCCAGT
GACGGTGGGGATTATCCATTGCCAATGCTCCGGAACCTTGTCATGGTGGCTGGGCATTCG
ATCTATACGAGCTCAAGATGCGGGGAGACCGAGAGTGAGAATTCCTGGTTCTTGGAGCCG
TACCAGAAGCACGCTGGACAGGCGGCCACCTTCCTGGCTCACATCAAGGAGGGGGTGGGG
ATCGCGGCGAGGGATGAGGGGGCACTCCTGTTGTTCAGCGGCGGGGAGACGAGGAGAGAT
GCTGGCCCGAGGAGTGAGGCACAGAGCTACTGGGCTATTGCCGAGTCGAAAGGATGGTTC
GGAAATGATGAGGGTGTAAGAAGCCGAGCACTCACCGAGGAGCATGCACGAGATAGTTTT
GAAAACCTCCTATTTAGTGTGTGCCGTTTCAGAGAGCTAACTGGAAGATACCCACAGAAC
ATAACTGTTGTTAGCTACGATTTCAAGGAGGAACGTTTTGCACAACTGCACAGAACCGCA
CTCGGATTCCCGGAAGGAAGGTTCTTCTTCTCAGGTACACCAGCTACGCCTTCTGCAAGG
GAGGCTGCTCTGAAAGGCGAAGCAGCTGTCCGAGCTCAGTTCCTTGAAGACCCGTATGGA
TGTCTAGGATCTCTTCATGTAAAGAGGCTGAAGCGGGACCCGTTCCACCGAACCATTCCA
TACCCTGCCGGTTGCCCAGAGCTGAAGGGTCTGTTCTCCTATTGTGGCCCGGTGCCTTAC
TCTGGGCACCTCCCTTGGACTGAGTAGTAGTGTAATGTACATCAGCCTTGGATGGAGCTC
CCCACTGCCACTTCACGATGTCCAGCAGCCTTGCACTGACCTTGTTCTGAATTGAGGGAG
AGTATATGTTACACTATCAACATATGGATTTTTAACCTTTTTGTTTCTTCTCG