Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d025419_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:10:118105924:118109876:1 gene:Zm00001d025419 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCAGTACCAGCACGCTGGCAGTCGAAGCCGCATGCCGCCATTCGCGCGCGGCGGCGGC
GCCTACAGCCGCGGACGGAAGCAGTTCTACCCGCCGTCTCCCCTCCCGTCGGCGGCGCTG
TCTCTGCCGCTGCAGAACAAGTATGAGGTGCTCATGGAGGCAGGCCGCCTCGCTGCCGAG
TACCTGTTGGCGAAGGGCGTGCTCCCACCGGGCTCCCTGCAGCAACGCAGCGGGACAGTC
GTCCCTGGAGGGTGGGGCCAGCTTCCTCCTCCGCCTCCGCTTTCCGTGACTTTGGAAGCC
CAAGCTTACCACGGGGCCAGGAATGGCCGGCGGCAGGTCGATGATGAGTGTGGTATTCGT
AATGCCAGCTCGCGGCGGAACCGTGGTGGTGACTACAGTAGCAGCAACAGTAGTAACTAC
AATAGAAGGGGGAAAAGGAAATTTGGGGCTGACAATAGGTATTCAGATTGGGCAAAGGAT
AGGGGGAGGAACAGGCGGTATTCTGATATCCGGAGTTATGATGACGATGATGACAATGGG
GCTCCTGGGTTCAAACGGGAGCGCCGAAGCAGTGGTGGGATTGACGAGGTTGGCAGTAGG
GTGTCAGGGGTGGCTGGGGAGGGACCATCATCGAAGGTGGAGGCGATGGGGGAGTCGGAG
CTGGAGGATACTGGGTCAAAGGCTAGTTCTAACAGCAATGTCCAGCAGAAAGCTGATGCT
TCGCAAGAGGCGAAGGATGAAAATGAGGCAAGCAAAATGCAGGAGAATAGTGTGGTGTCT
AATTCAGATGTAGTCGAGCAAGCTTTGAATGGTGAAGATAATAGCAACAATGATTCTTCT
GATGGTGTTCAAGAGTTAGAGACAAAACATTTGCCAGTATCCTCAGGTGAAAAGGTCTCA
GATGGGAGGCCTGAAGATAGTGGTGTTCTGAATGGCAAGGTTGAAGATGGCAGTACTTCG
CATGAGAAGGCTGAAGATGATACAACGTCAGAAGAGGTCTCCATTATGGAGAACAATTTG
CCTAATGATGTTGGAAATTTGCTAAATTATTGTAATTTTGCAAGAGTTCCAACAAGACCA
CGATCAGTGCTTGCAAACAGGAATGTTGAACCAGCTCAAAAAGAAATTGATGTGTCCGAA
CTGGTCAATCCAGTTACTCCTGAAGAAATGTCCCAGATGGCAATTGATAGAGAAGCTAAC
ACCAATTCCATAACTAATATTGAGGAAAACAGTAAAGACGAGCTCGTTGGTCAAGACCAA
GAACGTGCTGAAGAAATTAATATCTGCAATCAAGTGGCGGAATCAATGGCATTCCATGAA
AAGGAAACACAAGGTGAAACTGAGGAAATGGAAGAGCAGAAGAACATCCCTCGACATTAT
GAAGTTGAGGATAATAATGAGACTAATGAACTGTCTCCTACATTTGCTTCTTGTCAGAAT
AACTTCAGTTTGCAAGTGGAAAAAGGAATACAAATCTACAATTTAGATACCCCGCCACAA
GATGAAGTGTTGATTGATCCACCCGATAAAGGGAAGACAGTTGATTCAGAGTTATCACCT
AACATCAAAGCAGAAGATGCTGTTACAATAGAAGAGGAAAAGCTTGGCCAGTCTAGCTCA
TTTAAAATACGTGATCTCAACCTGGTTGGTAGTCCAGAGGTTGCCGACATGCGAGGTGAC
CCTCGTTTAGGCCAAAGCTTCACTGCTAGATGTTCAGTGGACCTACAAGATAATCAACAA
ATTGACCTTGGAACAGCTCTTGGTAACAATCCAAATAATACTGATACATGTACCCCATTT
CTGTTGGCAAACAAGGCAGTTCAAGTTATTGATATCGAAGATGACTCACCAATTGAAGCT
GGTGCTTGTGACACTTCAAAGTCAAAAGGTGAGATGGTATATTCTAGCATGGAGGGCTCG
ATGAACCCTCCGGCAAACAACGATGCTCTACATGGTATCCCAGATGGTTATAGCCTTGCA
ATTTCAGATTACCTTGGTGCTGATATGTCATGCTACCAATCAATACAAACAGAACTTCAA
GGTGGGATGAACCTAAATGGTTCAGAGGGCATAACTGTTATGGATGATTCAATATACAGT
TCTCTTGGTGACATAGGTTTTATGGAGGTTTGGGACCAGCAACCTCAAGACTATGAGAAG
TTCTTCTGA

Peptide Sequence

PEP ID

Zm00001d025419_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:10:118105924:118109876:1 gene:Zm00001d025419 transcript:Zm00001d025419_T003 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MQYQHAGSRSRMPPFARGGGAYSRGRKQFYPPSPLPSAALSLPLQNKYEVLMEAGRLAAE
YLLAKGVLPPGSLQQRSGTVVPGGWGQLPPPPPLSVTLEAQAYHGARNGRRQVDDECGIR
NASSRRNRGGDYSSSNSSNYNRRGKRKFGADNRYSDWAKDRGRNRRYSDIRSYDDDDDNG
APGFKRERRSSGGIDEVGSRVSGVAGEGPSSKVEAMGESELEDTGSKASSNSNVQQKADA
SQEAKDENEASKMQENSVVSNSDVVEQALNGEDNSNNDSSDGVQELETKHLPVSSGEKVS
DGRPEDSGVLNGKVEDGSTSHEKAEDDTTSEEVSIMENNLPNDVGNLLNYCNFARVPTRP
RSVLANRNVEPAQKEIDVSELVNPVTPEEMSQMAIDREANTNSITNIEENSKDELVGQDQ
ERAEEINICNQVAESMAFHEKETQGETEEMEEQKNIPRHYEVEDNNETNELSPTFASCQN
NFSLQVEKGIQIYNLDTPPQDEVLIDPPDKGKTVDSELSPNIKAEDAVTIEEEKLGQSSS
FKIRDLNLVGSPEVADMRGDPRLGQSFTARCSVDLQDNQQIDLGTALGNNPNNTDTCTPF
LLANKAVQVIDIEDDSPIEAGACDTSKSKGEMVYSSMEGSMNPPANNDALHGIPDGYSLA
ISDYLGADMSCYQSIQTELQGGMNLNGSEGITVMDDSIYSSLGDIGFMEVWDQQPQDYEK
FF

Transcript Sequence

Transcript ID

Zm00001d025419_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:118105924:118109876:1 gene:Zm00001d025419 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGTGACGCCAACCCTGACTCCGTTTGACGCGGCTCCGATGGTCACCGCCGGCGACCTCGC
CGCTGCCGCCAACTCCTGAGACCTCGTCGCGCCTAGGCCCTAGGGGCGTGAGCTTGCCTC
CGCCGCGATCCGGGTACCAGTCCTCGAGGATGCAGTACCAGCACGCTGGCAGTCGAAGCC
GCATGCCGCCATTCGCGCGCGGCGGCGGCGCCTACAGCCGCGGACGGAAGCAGTTCTACC
CGCCGTCTCCCCTCCCGTCGGCGGCGCTGTCTCTGCCGCTGCAGAACAAGTATGAGGTGC
TCATGGAGGCAGGCCGCCTCGCTGCCGAGTACCTGTTGGCGAAGGGCGTGCTCCCACCGG
GCTCCCTGCAGCAACGCAGCGGGACAGTCGTCCCTGGAGGGTGGGGCCAGCTTCCTCCTC
CGCCTCCGCTTTCCGTGACTTTGGAAGCCCAAGCTTACCACGGGGCCAGGAATGGCCGGC
GGCAGGTCGATGATGAGTGTGGTATTCGTAATGCCAGCTCGCGGCGGAACCGTGGTGGTG
ACTACAGTAGCAGCAACAGTAGTAACTACAATAGAAGGGGGAAAAGGAAATTTGGGGCTG
ACAATAGGTATTCAGATTGGGCAAAGGATAGGGGGAGGAACAGGCGGTATTCTGATATCC
GGAGTTATGATGACGATGATGACAATGGGGCTCCTGGGTTCAAACGGGAGCGCCGAAGCA
GTGGTGGGATTGACGAGGTTGGCAGTAGGGTGTCAGGGGTGGCTGGGGAGGGACCATCAT
CGAAGGTGGAGGCGATGGGGGAGTCGGAGCTGGAGGATACTGGGTCAAAGGCTAGTTCTA
ACAGCAATGTCCAGCAGAAAGCTGATGCTTCGCAAGAGGCGAAGGATGAAAATGAGGCAA
GCAAAATGCAGGAGAATAGTGTGGTGTCTAATTCAGATGTAGTCGAGCAAGCTTTGAATG
GTGAAGATAATAGCAACAATGATTCTTCTGATGGTGTTCAAGAGTTAGAGACAAAACATT
TGCCAGTATCCTCAGGTGAAAAGGTCTCAGATGGGAGGCCTGAAGATAGTGGTGTTCTGA
ATGGCAAGGTTGAAGATGGCAGTACTTCGCATGAGAAGGCTGAAGATGATACAACGTCAG
AAGAGGTCTCCATTATGGAGAACAATTTGCCTAATGATGTTGGAAATTTGCTAAATTATT
GTAATTTTGCAAGAGTTCCAACAAGACCACGATCAGTGCTTGCAAACAGGAATGTTGAAC
CAGCTCAAAAAGAAATTGATGTGTCCGAACTGGTCAATCCAGTTACTCCTGAAGAAATGT
CCCAGATGGCAATTGATAGAGAAGCTAACACCAATTCCATAACTAATATTGAGGAAAACA
GTAAAGACGAGCTCGTTGGTCAAGACCAAGAACGTGCTGAAGAAATTAATATCTGCAATC
AAGTGGCGGAATCAATGGCATTCCATGAAAAGGAAACACAAGGTGAAACTGAGGAAATGG
AAGAGCAGAAGAACATCCCTCGACATTATGAAGTTGAGGATAATAATGAGACTAATGAAC
TGTCTCCTACATTTGCTTCTTGTCAGAATAACTTCAGTTTGCAAGTGGAAAAAGGAATAC
AAATCTACAATTTAGATACCCCGCCACAAGATGAAGTGTTGATTGATCCACCCGATAAAG
GGAAGACAGTTGATTCAGAGTTATCACCTAACATCAAAGCAGAAGATGCTGTTACAATAG
AAGAGGAAAAGCTTGGCCAGTCTAGCTCATTTAAAATACGTGATCTCAACCTGGTTGGTA
GTCCAGAGGTTGCCGACATGCGAGGTGACCCTCGTTTAGGCCAAAGCTTCACTGCTAGAT
GTTCAGTGGACCTACAAGATAATCAACAAATTGACCTTGGAACAGCTCTTGGTAACAATC
CAAATAATACTGATACATGTACCCCATTTCTGTTGGCAAACAAGGCAGTTCAAGTTATTG
ATATCGAAGATGACTCACCAATTGAAGCTGGTGCTTGTGACACTTCAAAGTCAAAAGGTG
AGATGGTATATTCTAGCATGGAGGGCTCGATGAACCCTCCGGCAAACAACGATGCTCTAC
ATGGTATCCCAGATGGTTATAGCCTTGCAATTTCAGATTACCTTGGTGCTGATATGTCAT
GCTACCAATCAATACAAACAGAACTTCAAGGTGGGATGAACCTAAATGGTTCAGAGGGCA
TAACTGTTATGGATGATTCAATATACAGTTCTCTTGGTGACATAGGTTTTATGGAGGTTT
GGGACCAGCAACCTCAAGACTATGAGAAGTTCTTCTGAGGCGCTCGTATCCCTGAAACTG
TTCTGGAGTTCGACTGATAAATAGACCAGTTACACTTGCATAGGCAGAAATAAAACACCT
GATCGTGCCTATAAACTGGAAACCCGTATACTTGTGCGCCAGCAGCAGCTCTTTCACTTG
TATGTTCCAGGCCATGCATATTGGGGCTTTTGTACGGGTGCATCCTACGCGAAGCACTTT
CCCTTCTGTAATACCAGGGTCTGCGTCGGCAGCTCAAAGAGCAGATATTCGTATGAAACA
GTTCTTTGACTCCCTGCCTTGCCCGACAGCGGTGTAAAAAGTTGTCGTATAGCTGCCACG
TAATTCAAAGGAATTGACCTAAGCACGACATAGTATTCGTCTGAAACATGTCTTCATTTA
TAAACAGTTCTATATTCCGAAATAGAATTGTTTATTTGTT