Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d025412_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:10:117864866:117874537:1 gene:Zm00001d025412 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nicotinate phosphoribosyltransferase-like protein
Sequence	ATGGCAGCGACGTCGGCGCCGCCCGCGAGCGCCCACGCCAACGGCAACGGCTCCCTCGTG GGGGTGGCGGCGCCGGTGGGAGCGCCCACCAACCCCATGGCGACGGCTCTGCTCACCGAC CAGTACCAGTTCTCCATGGCCTACGCGTACTGGAAGGCCGGGAAGCACGCCGACCGTGCC GTGTTTGACCTGTACTTTAGGAAAAATCCATTTGGTGGGGAATTCACTGTTTTTGCTGGC CTTGAGGAGTGCATCAAATTTATTGCGAATTTTAAGTTCACAGAACATGACATTTCTTTC CTGCAATCAGTCATGCCAATGTGTGAGGGTGCGTTCTTCAATTATCTCAGGGAAGTTGAC TGCTCTGATGTAGAGGTGTACTCCATTCCTGAGGGATCAGTAGTTTTTCCAAAAGTGCCC TTGATGAGAGTTGAGGGTCCAGTTGCTGTGGTTCAACTTCTGGAGACTCCATTTGTGAAT CTTATCAATTATGCCTCTTTGGTAACTACTAATGCTGCGCGTCATCGTCATGTTGCTGGA AAGTCAAAGGTTCTGTTAGAATTTGGTTTAAGACGGGCACAGGGACCTGATGGAGCAATA AGTGCCTCAAAATATTGTTTTATGGGAGGTTTTGACGCAACCAGTAATGTTTTGGCTGGG AATTTGTTTGGCATACCACTTCGTGGAACACATTCTCATGCTTTTGTTAGCTCATACATG AGCCTTGATGAGATACCAGACAAGGCCCTCAAGAGCAAAGATGGCTCAAGACTTTGCCAG GATTTTGTTAGTTTAGTGCAAGAGTGGCTTCAAAAGATTCAGGCAGCAAATTCATTAGGT GGTGTATTTGGTGATACAAATAAAAGTGAGCTGGCTGCATTTGCATCCTACGCATTGGCT TTTCCAAGCAACTTCCTTGCTCTTGTGGACACATATGACGTTATGCGAAGTGGTATTCCG AATTTCTGTGCAGTGGCTCTAGCACTTCATGACTTAGGGTACAAGGCATCTGGTATTAGA TTAGATTCTGGTGATCTGGCCTATTTGTCCATTGAAGCACGAAAAGTGTTTAGTGCAGTA GAGAAGGAATATAATGTACCTGGTTTTGCAAAGATGCTCATTACTGCTAGCAACGACCTG AATGAAGAAACAATTGATGCCCTCAACAAACAGGGTCATGAGGTTGATGCCTTTGGAATT GGAACTTACCTTGTGACGTGTTATTCCCAGGCTGCTCTTGGCTGTGTCTTTAAGCTAGTT GAGATAAATAATAAACCTCGTATTAAGCTTTCTGAGGATGTGGCAAAAGTTTCCATTCCA TGCAAAAAGAGATGCTTCAGACTGTATGGGAAAGAAGGCTACCCACTGGTAGATATCATG ATTCGCGAAAGTGAACCATCGCCTAAGGCAGGAGAAAGAATCCTCTGCCGCCATCCATTC ATTGAATCAAAGAGAGCATATGTTGTCCCCCAGCATGTTGAGGAGCTTCTACAGTGCTAT TGGCCTGGGACATCAGATAAACCTAGAGCAGAGCTGCCCTCCTTGGAGAAGATCAGAAGC CGCTGCATGCAGCAGCTTGAAATGCTGCGCCCGGATCACATCCGGCGGCTAAATCCAACG CCCTACAAGGTGAGCGTGAGCACCAAGCTGTACGATTTCATCCACCGCCTATGGCTGAAC GAGGCGCCAGTAGGTGAACTGCAGTAG

Peptide Sequence

PEP ID	Zm00001d025412_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:10:117864866:117874537:1 gene:Zm00001d025412 transcript:Zm00001d025412_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nicotinate phosphoribosyltransferase-like protein
Sequence	MAATSAPPASAHANGNGSLVGVAAPVGAPTNPMATALLTDQYQFSMAYAYWKAGKHADRA VFDLYFRKNPFGGEFTVFAGLEECIKFIANFKFTEHDISFLQSVMPMCEGAFFNYLREVD CSDVEVYSIPEGSVVFPKVPLMRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRHVAG KSKVLLEFGLRRAQGPDGAISASKYCFMGGFDATSNVLAGNLFGIPLRGTHSHAFVSSYM SLDEIPDKALKSKDGSRLCQDFVSLVQEWLQKIQAANSLGGVFGDTNKSELAAFASYALA FPSNFLALVDTYDVMRSGIPNFCAVALALHDLGYKASGIRLDSGDLAYLSIEARKVFSAV EKEYNVPGFAKMLITASNDLNEETIDALNKQGHEVDAFGIGTYLVTCYSQAALGCVFKLV EINNKPRIKLSEDVAKVSIPCKKRCFRLYGKEGYPLVDIMIRESEPSPKAGERILCRHPF IESKRAYVVPQHVEELLQCYWPGTSDKPRAELPSLEKIRSRCMQQLEMLRPDHIRRLNPT PYKVSVSTKLYDFIHRLWLNEAPVGELQ

Transcript Sequence

Transcript ID	Zm00001d025412_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:10:117864866:117874537:1 gene:Zm00001d025412 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nicotinate phosphoribosyltransferase-like protein
Sequence	ATTCTGGTCCCTTCCTTGCCTTCTCCGCCTCCGCATCCATCCGGTCTCCAGTTGTCTCCT CCCGCCTCCTTCCGGTCCCCTCCCGGCGCAGCCTCTCCCGCCCCCTCCAGCCAAGCGGAC CCTAGGCGGAGCCACCTTCCACGCTTCCCGAAGCTCGCCCGTGAGGGGAGGCCAGGATGG CAGCGACGTCGGCGCCGCCCGCGAGCGCCCACGCCAACGGCAACGGCTCCCTCGTGGGGG TGGCGGCGCCGGTGGGAGCGCCCACCAACCCCATGGCGACGGCTCTGCTCACCGACCAGT ACCAGTTCTCCATGGCCTACGCGTACTGGAAGGCCGGGAAGCACGCCGACCGTGCCGTGT TTGACCTGTACTTTAGGAAAAATCCATTTGGTGGGGAATTCACTGTTTTTGCTGGCCTTG AGGAGTGCATCAAATTTATTGCGAATTTTAAGTTCACAGAACATGACATTTCTTTCCTGC AATCAGTCATGCCAATGTGTGAGGGTGCGTTCTTCAATTATCTCAGGGAAGTTGACTGCT CTGATGTAGAGGTGTACTCCATTCCTGAGGGATCAGTAGTTTTTCCAAAAGTGCCCTTGA TGAGAGTTGAGGGTCCAGTTGCTGTGGTTCAACTTCTGGAGACTCCATTTGTGAATCTTA TCAATTATGCCTCTTTGGTAACTACTAATGCTGCGCGTCATCGTCATGTTGCTGGAAAGT CAAAGGTTCTGTTAGAATTTGGTTTAAGACGGGCACAGGGACCTGATGGAGCAATAAGTG CCTCAAAATATTGTTTTATGGGAGGTTTTGACGCAACCAGTAATGTTTTGGCTGGGAATT TGTTTGGCATACCACTTCGTGGAACACATTCTCATGCTTTTGTTAGCTCATACATGAGCC TTGATGAGATACCAGACAAGGCCCTCAAGAGCAAAGATGGCTCAAGACTTTGCCAGGATT TTGTTAGTTTAGTGCAAGAGTGGCTTCAAAAGATTCAGGCAGCAAATTCATTAGGTGGTG TATTTGGTGATACAAATAAAAGTGAGCTGGCTGCATTTGCATCCTACGCATTGGCTTTTC CAAGCAACTTCCTTGCTCTTGTGGACACATATGACGTTATGCGAAGTGGTATTCCGAATT TCTGTGCAGTGGCTCTAGCACTTCATGACTTAGGGTACAAGGCATCTGGTATTAGATTAG ATTCTGGTGATCTGGCCTATTTGTCCATTGAAGCACGAAAAGTGTTTAGTGCAGTAGAGA AGGAATATAATGTACCTGGTTTTGCAAAGATGCTCATTACTGCTAGCAACGACCTGAATG AAGAAACAATTGATGCCCTCAACAAACAGGGTCATGAGGTTGATGCCTTTGGAATTGGAA CTTACCTTGTGACGTGTTATTCCCAGGCTGCTCTTGGCTGTGTCTTTAAGCTAGTTGAGA TAAATAATAAACCTCGTATTAAGCTTTCTGAGGATGTGGCAAAAGTTTCCATTCCATGCA AAAAGAGATGCTTCAGACTGTATGGGAAAGAAGGCTACCCACTGGTAGATATCATGATTC GCGAAAGTGAACCATCGCCTAAGGCAGGAGAAAGAATCCTCTGCCGCCATCCATTCATTG AATCAAAGAGAGCATATGTTGTCCCCCAGCATGTTGAGGAGCTTCTACAGTGCTATTGGC CTGGGACATCAGATAAACCTAGAGCAGAGCTGCCCTCCTTGGAGAAGATCAGAAGCCGCT GCATGCAGCAGCTTGAAATGCTGCGCCCGGATCACATCCGGCGGCTAAATCCAACGCCCT ACAAGGTGAGCGTGAGCACCAAGCTGTACGATTTCATCCACCGCCTATGGCTGAACGAGG CGCCAGTAGGTGAACTGCAGTAGATGATGATCATATAAAAGAAGTTTTGGGTCATCTGCG ATACAGCAGCAATTCATCGAAGAAAATTAGAGCTCTTCTGCACAACATCAACAGTTGAGC CCATGGCAGGATTTTGCTCCCCAAATTTTCATCTCTAGTCACCGGTATAGAGGCAGGTTA ATCAGGTTGTCTAGTTTATACGTCCCTTAATTGGTGGGATGCTATACACATCATCATCAG AAAAGAACCGAAATCATATGGAGCCAAAAATGTTACTAGGTCGTCCGGTGTTTGTGCTCG ACGGTGTCACATTTGTTTTTCTAGCCGATCGTGCATATGGTCATATAAAACACTGCACTG TTGATTGTACTGTTTATATAGTGAAATTTGAAATGATAGATGAAAT