Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d025380_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:10:116496409:116503523:1 gene:Zm00001d025380 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGAGAATGGGTTTTGGTTCCTATGTGCATGTGTCCAATGCATTGATATCAATGTATGCA AAATGCGGGAGCATTGGTGAAGCACGAGCTGTATTTGAGAGCATTACATGCAAAGACCTG GTCTCTTGGAACTCCTTGATCTTTGGATATTCACAGCATGGCCTTGCTGAGCATTGCCTA TACTTGCTAAGAGAAATGGAAGGACATATAATACCGGATGCAATCTCCTTCCTAGGTGTG CTCTCATCATGCCGGCATGCATGCCTTGTGGCAGAGGGCCGACGCTGCTTCAGGGCAATG ATTGAACATGGAGTAATACCAGAGATAGATCACTACTCATGTATGGTTGATCTTTTTGGC CGTGCAGGACTGCTTGATGAAGCATGGGATCTGATCCAGACGATGCCCATGCCTCCAAAT GGTGTCATATGGGGCTCCCTGCTAGCTTCCTGTAGGCTGCATGGGAGCATTTCGATCGGC ATACAAGCTGCAGAGCACCGTCTAAAGCTGGAACCAAGTTGTGCTGCAACTCATGTCCAG CTAGCGAATTTGTATGGGAGCATTGGGTGCTGGGATGATGTGGCAAGAGTGAGGAAAGTG ATGAAGGAGAGAGGGCTGAAAACAAATATCGGGTGCAGTTGGATAGAAGTTGGCAATAAA GTTTATACATTTACAGCAGAAAACAGATCAAAGAACCAGGTAAACAATGTCCTAGTTGTT CTCGATTGCTTGCAGTCACATATGGATCACAAGTATGATATACTGATTGAGGGTCTGGAT TGGGATGATCCTGAACATATAAAGTTGAGTTTAAACAATATATAA

Peptide Sequence

PEP ID	Zm00001d025380_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:10:116496409:116503523:1 gene:Zm00001d025380 transcript:Zm00001d025380_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	MRMGFGSYVHVSNALISMYAKCGSIGEARAVFESITCKDLVSWNSLIFGYSQHGLAEHCL YLLREMEGHIIPDAISFLGVLSSCRHACLVAEGRRCFRAMIEHGVIPEIDHYSCMVDLFG RAGLLDEAWDLIQTMPMPPNGVIWGSLLASCRLHGSISIGIQAAEHRLKLEPSCAATHVQ LANLYGSIGCWDDVARVRKVMKERGLKTNIGCSWIEVGNKVYTFTAENRSKNQVNNVLVV LDCLQSHMDHKYDILIEGLDWDDPEHIKLSLNNI

Transcript Sequence

Transcript ID	Zm00001d025380_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:10:116496409:116503523:1 gene:Zm00001d025380 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	CTTGAGTGTCTGCACTAATCATGCATTTCTTGTACTTGGTAAAAGTGTGCAAGCCCTACA AATGAGAATGGGTTTTGGTTCCTATGTGCATGTGTCCAATGCATTGATATCAATGTATGC AAAATGCGGGAGCATTGGTGAAGCACGAGCTGTATTTGAGAGCATTACATGCAAAGACCT GGTCTCTTGGAACTCCTTGATCTTTGGATATTCACAGCATGGCCTTGCTGAGCATTGCCT ATACTTGCTAAGAGAAATGGAAGGACATATAATACCGGATGCAATCTCCTTCCTAGGTGT GCTCTCATCATGCCGGCATGCATGCCTTGTGGCAGAGGGCCGACGCTGCTTCAGGGCAAT GATTGAACATGGAGTAATACCAGAGATAGATCACTACTCATGTATGGTTGATCTTTTTGG CCGTGCAGGACTGCTTGATGAAGCATGGGATCTGATCCAGACGATGCCCATGCCTCCAAA TGGTGTCATATGGGGCTCCCTGCTAGCTTCCTGTAGGCTGCATGGGAGCATTTCGATCGG CATACAAGCTGCAGAGCACCGTCTAAAGCTGGAACCAAGTTGTGCTGCAACTCATGTCCA GCTAGCGAATTTGTATGGGAGCATTGGGTGCTGGGATGATGTGGCAAGAGTGAGGAAAGT GATGAAGGAGAGAGGGCTGAAAACAAATATCGGGTGCAGTTGGATAGAAGTTGGCAATAA AGTTTATACATTTACAGCAGAAAACAGATCAAAGAACCAGGTAAACAATGTCCTAGTTGT TCTCGATTGCTTGCAGTCACATATGGATCACAAGTATGATATACTGATTGAGGGTCTGGA TTGGGATGATCCTGAACATATAAAGTTGAGTTTAAACAATATATAAATTTGAAGATCATT GCCCGCCATGTTCAGCTTCATTTGAAGAGGCACTCAATAGGAATTGACATGTGTCATTCA CACCTCAAATATCTTCAATCTCGATGTAACATGTAAGTTTAACACCTGTGTTTGAGCATT TGAAAAGATTTGGTTTGCTCAGTTTACTTTCATCTGAGCTACTGCTGATATCCATATTCA TTTTGTACTAAATATATTTTTCACAATTGAAACCTCTGTATACAAGAATGCATGTTCAAT CTCTTGAGTAATGTGCAGTTCTGCATGGAAGATGATGGGCAATAAACTGGGTTACTTTGA TGCAATGGGTTGTGCGATGCTTTGCAAGGGAGCATCTTTTATTGTCTAGGTGGTTAGGAT GCTTGCTATTCAATTCTTACCTAAGAGACCTGTCTATGAGTTCTGGCAAGGCGATGGCAT TATGTTTTTTCTTGTGCATTTGTTTCGTCCAGCAGCGTATATATTTTATTGTGAATAGTT ATTCCACATCAAGGATCCAGTAGTGTCCTTCATCGAATTTATACTTGCTAATCTGCTATC CATACTTCTAAGATGTTATCATTTAACTCTGAGTATTTCACTTGATTAGCTAATGGTGTA ATGGACCGGGCATTGCAACGAGCACACAAGATATTTAGTGGTTCTCTCTCAAACAGCTAT TAGTGTGGCTTACTTAATTTTTTATTGCACACAAGAATGCATGCTCGGCTCTCCTCACCA GGCAAGAATAGGCAAAGCAAGCAAAGCTACCTGTTTGGTTCTGTTTTGTCCTATCTCTCT TTTCCTCTTCCATTGCTTTGGTTGAACACCACCAAACAGAGCAAAGCAAATCTTGCTAGC TCGGGAGAGCGAATTTGACTCGCCCATGCAGATGCAACCAAGGAAAACCTTCCCGTGCAA AGCCAGTTTCAACTCTGCTGCGAAACAGGTATCCCAGTGGAGCGAGGCAAAACAGGAACT GGCAAGAGAACCAAGCAGCCCCTTAGTTGTTCTAGATCAACACATAAAATCTTGTGTTAG GGCAACTCTACCAGATTGATTAAAACCATTCCTGTTTCCCTATAACCAACAATAGAGAGG ATCAGATGCACCCATTTCTAAGGCTACCCGCAGCGGCTGCCACGCGCCCGCCCCCTCCCC TTGCATGGCGGCTACAGGGGCGCGCGGCAGCCCGCAGCGCGCCCCCCTATGGCGCTCCCC ACGCGGCCGTCCCCTTCTCTCTCCCTCCGGCTGTAGCGCTCGTCCGGCTCCTCCCCTTCC ACTATAGCTGTGGGCCCGCCTCCAATTATTAGTAGAAGAAAAATTGATAGTGGATGAAAA GTAGGTATATGAAATTATATTTTATGGTTGTAGAAGTGATATAAGGGAGAAATTTAGGGG GAACCGCTGCGGATAGCCTAATCCCCTTCACCGAAAATTTCTCGGCTCCTCAAAATCTCC CCTCTCTTTCCCTCAAATAAAAGGGATCAGGCAGCAATTTTTCTCAATCCTCTTCTTACT CCTCTCACTGATATCTGGGCCCCACGCTGACACTGCATCTCCGCAAAGACCAGGCAAGCT GGCGTGCGGGCTGTCACGCCGTGCAGAGTCCTGCGCCACCCAGCCTTGGGCAAGTTGCCA CCACATGCCCCATGCCGCACTGCTCCCTGCACCGGGTAAGCTGTATCCGCAGGCCGCAGC AAGAGGAGAAGAGGGAATCTGGAGAAGAGATATACACGTGTGTACACCACGTATAAAATG GATGAGTGTTTCTCAATCTGCTAGAGCACATATCCCCTATACATTTTAATTCAGTTTTCT CAATCCGCTATATACATGATTTTAAGGGAAAGAGGGAAACAAAACACTGTGCATGTATGC ACTTTCAACTGAATTTTTGGCTTGCTGTATGGTATATGACTAGCTCACTGTAAGGAGACA GCAGCAGTCCTGAATATATTGCTGGGTCACTTGATTTTGTACAGTCAGTAGATGAGAATT GGCAAGTAAGAGAGTGCGGCCTTGCTGACCTTTTCTATTCGGTACTGTCAGAACTCAGAA GTCCTTTTTGAATATTAATATGGATGTAAAAACACAATGTTTCAGAAAAAAAATGGAGTA TAAAGACCTACTCAACCTTTATGGCTTATTATCTGCATTATCTATTGAAATTGACAACTC TTTTCTCTGTTTTGTAGTAACTATATAGGTTTTCCTAACTTTTTGTGAAATACTCCCTCC GTTCATAAATATATGACACCGTTGACTTTTTTAAAAAAACTTTGACTACTCGTCTTATTC AAAATAATAATGACTTATCATTTATTTTTTGTGATTTGTTTTATCGCGAAAAGGCATCTA GCTGAGTCGGTTAGGTGGTCTGAGTAGCACTCCTCAGGTCCTGGGTTCGACTCCCCGTGG TAGCGAATTTTAGGCTGTGGTTAAAAAAAATCTCCTCGTCTGTCCCATGCCAAAGCACAG GTCTAAGGCTCAGCCCCGGTCGTGGTCGTTCTCACATGGGCTTCGATGCCGCTGTGTATG GGTGGGGCAGGGGTTCGGGGGTTTTCTTGACCTGTGTGAGAAGGTCTTCTTCTTAATACA ATACCCGGGGCTGTCTTACCCCTCGCAGGTCAAGTTTTGATTTGTTTTATCACTTAAGGT AGTTTATGCTTGACTTAAAATTTTACATTTTTGAAGAAATTTTATGAATAAGGTGAGTGG TCAAAATTTTGGAAAAAAGTCGACGGTGTCATATATTTGTGAACGGAGGTAGTATAAGCT TTACATATGAATTTATCGATGCGCCCTTTTCTCTTTCTTCCCTCACTGACCAACTTATCC TATATTCTCTATCATTTAGTAGGTAAGCAAAGATATCAAGGTCATTTTATCTCATCGTTT TGGTTTTCACCTTGTTAATCTTTGTGGCTATGTTGCACAAGAATGCAGGCAAGGTAGAAA TGGCCAGATGCATTCCTGTAACTATACCTGGTGTAGTGGTGAGAGTTGTCTCACTGAGTC ACCAAGTTGTGGGTTCGAAGCAATATCTTTGCATTTACATTTTATAGAGGGAAGACTTGC CTCGGTTTATCCCTTCTCCAGATCCTACTCATGTGGGAGCCTCTGGCCTAGTTAGGAGTC TTGTTTGCATAAAGTAAAGAGGAATCGCACCGAGGGATAGGCATTGTGAGTATGACGTGT GCTTTGCATGGGCCAGCACCTGACTCAGTTCCTGTGAAATCATGAATCCACCAACGGAGG TCAAATACCTGACTGCAGCCAGCCAGAATGTTTACAGCCACACATGATGATCCTATAGCT GGCTAGAAGAAGAAGAAATATTTACAGCCATCCAGCATAACCTTAGAGCTGGTTTGAAGA GGATGCAACCGGTGCAGCTGCACAAATGCACAAGGACATGGAGTACCCAAGAAGGACACT GCTGCACACCCCTTTCTCCGGGCATCCCTCTGGTCCAAGCCAGCCAATAGATGGAGCCAC GGCCACAGACGGAAGCAACTTCGACGCGAACGTGGTCATGATCCTGGCTGTCCTCCTGTG CGCGCTGATCTGCGCTCTCGGGCTCAACTCCATCGTCCGGTGCGCGCTGCGGTGCTCGAG CCGGGTGGTGGTGGGTCCTGAACCGAACCAGGTGACGCGGCTTGTCCAGAGCGGGCTGAG GAGGAAGGCGCTCCGAGCCATGCCGGTCCTGGTCTACTCGCCTGGGCTGAGGATCAATGC TGCCAACCCGACATGCGCGATCTGCCTCTCGGACTTCGAGGCAGGGGAGCATGTCAGGGT CCTCCCCAAATGCAACCACGGCTTCCATGTCAGGTGCATCGACCGGTGGCTGCTGGCGCG GTCGACGTGCCCGACGTGCCGGCAGTCCCTGTTCGGAGTGCCGCAGAAGGCCTCCGGCTG CTCCGAGGCGAGCCGGGCTGCCGAGCCAGAGCCTGCGCCTGCGCCTGCGCCTGCTCGCTC TGTCCTTGTGCCGCTCAGACCTGAAGGTTTGGTCACTCATTATGATTTTTAGAATGTTCG GTTGCTTCTTAGTCGTTGCATAAATGATGAGAGGGAGGCTGAGAAAAAGTAGAAACAAAA ACTGTGAGCATTAGATCTTACTGCCAATCTGGTTTGTACATTGTTGGTTGCTAGAGAAAA AAAAGATGTGAAGGTTTTC