Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d025323_T011
CDS Infomation	cds chromosome:B73_RefGen_v4:10:114052983:114057209:-1 gene:Zm00001d025323 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GRMZM2G443509 description:Probable protein phosphatase 2C 40
Sequence	ATGGTGGACGTAGAACTGTTTGTTAAGGAGACTAGTGATCACAGCATCAGCTCTGAGGAA GAAGATATCCTTGTCAGGAGCTGTAGCAATCTCAATGTGAGCTTTGGATACCATTGTGAT TCTCATCAGAGTTTTTCTCCTGAAAATGATCATGGCAATGGCATTTCTCCTAAGAACACG TTTGGGACTAATACCATGATGGGGTCACGAAATGGCTCATTCACTTGTTTATCTGGTGCT GCTATTAGTGCAAATTTCACACTGGCAAATACAAACATTTGCAATGGTCTTATTGGCGAA GAAATTTTACCAGAACTAGATTCTCCAAACTCCTTTAGAAAAATTGTTTCTTCTCCATCA ATGTCAAGATTGGACTCGTTCTCCACCTCACAAGGAAGTCCTGTGTCAACTGAGAGCTCT ATATTTGAGATCAGTAAAAACCTTTGGAGGTCCAGTGCACCAACAACTGTATCATCCAAT TTTCTGACTAATACAGAGGTGAAAATGGCTGGGGGAGCTGCTGGAGAGGATAGAGTCCAA GCTGTGTGCTCAGAGAAAAATGGATGGCTGATTTGTGGGATATATGATGGGTTTAATGGG AGGGATGCAGCTGATTTTCTTGCAGTAACTCTATATGATAACATAGTATATTACTTGTAC CTGCTGGAGAATCGGATAAAGCAACAAAATGGTCTGTACAATTCATCAGAAAGCTCTCTC GATGGTCTTAAAAGTGAGTTAACACTAGCCATGAGAAACTCAGAGAATGAAGACATAAAA TTTTCTGAAACATTTCGATCTGGCGTGCTGAATTGCCTTTCTACTGCTGTTGAGCAAGCC GAGAATGACTTTTTATGCATGGTTGAACAAGAGATGGATGATAGACCAGATTTAGTTTCA GTAGGGTCTTGTGTTCTGGTTCTTCTTCTTCATGGAACAGATCTGTGCATCTTAAATATG GGGGACAGTAGAGCTGTGCTTGCTTCCATGCCATATGTAGAAAATGGTGCTTTGAAGGCT GCTCAACTGACAGAGACCCACTCACTTGAAAATCCTTCGGAATACCAAAGACTTTTAGCT GCTCATCCCAATGATTCTTCAGTTGTCAGGGGTAACAAAATAAAAGGAAAGCTGAAGGTT ACTCGTGCTTTTGGAGTTGGCTATCTGAAGCAGAGGAAGTTCAATGATGCACTCATGGGC ATTCTACGAGTCCGCGATTTGAGCAGCCCTCCATATGTTTACACAAATCCACACACATTG AGTCACAAAGTTACAGATGATGATTTGTTCGTTGTGCTTGGTAGTGATGGCCTATTTGAT TTCTTCAGTAATGATGAAGTTGTTCTGTTGGTTTATCAATTTATGCACGATAATCCAATG GGGGATCCTGCAAAATATCTTATCGAGCAACTTATACTCAAAGCAGCCAAGGAAGCAGCT TTAACAGCCGAAGAATTGATGAGGATACCTGTTGGGAGTAGGAGAAAGTACCACGATGAT GTGACTGTCGTTGTTATCACCCTTGGAAATGCACAGAGAACGATGACTGCGTCAACATCC ATGTGA

Peptide Sequence

PEP ID	Zm00001d025323_P011
PEP Infomation	pep chromosome:B73_RefGen_v4:10:114052983:114057209:-1 gene:Zm00001d025323 transcript:Zm00001d025323_T011 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GRMZM2G443509 description:Probable protein phosphatase 2C 40
Sequence	MVDVELFVKETSDHSISSEEEDILVRSCSNLNVSFGYHCDSHQSFSPENDHGNGISPKNT FGTNTMMGSRNGSFTCLSGAAISANFTLANTNICNGLIGEEILPELDSPNSFRKIVSSPS MSRLDSFSTSQGSPVSTESSIFEISKNLWRSSAPTTVSSNFLTNTEVKMAGGAAGEDRVQ AVCSEKNGWLICGIYDGFNGRDAADFLAVTLYDNIVYYLYLLENRIKQQNGLYNSSESSL DGLKSELTLAMRNSENEDIKFSETFRSGVLNCLSTAVEQAENDFLCMVEQEMDDRPDLVS VGSCVLVLLLHGTDLCILNMGDSRAVLASMPYVENGALKAAQLTETHSLENPSEYQRLLA AHPNDSSVVRGNKIKGKLKVTRAFGVGYLKQRKFNDALMGILRVRDLSSPPYVYTNPHTL SHKVTDDDLFVVLGSDGLFDFFSNDEVVLLVYQFMHDNPMGDPAKYLIEQLILKAAKEAA LTAEELMRIPVGSRRKYHDDVTVVVITLGNAQRTMTASTSM

Transcript Sequence

Transcript ID	Zm00001d025323_T011
Transcript Infomation	cdna chromosome:B73_RefGen_v4:10:114052983:114057209:-1 gene:Zm00001d025323 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GRMZM2G443509 description:Probable protein phosphatase 2C 40
Sequence	ATTTCCGTCCCCCATCCCCTCCGCACCGCAGCTGTCTCTTCCTCTCCTGGTCTTCGTCCT GCCACTCCTCCACCTCAACTTGCTCTGCTCTTCTCGGATTACGGCTCGGGGTTGGTCATT GGCGGACAGGGCGTTTCAAGAAAGGGCGGCGGCGCTTTTCCTGACGCAAGTTGCCCCGGT GTCCTGGCTTGCTGCGCGCTTGGGGGTTGGGCTCAGGAATGGGGGGAGAGCAGGCGCTGC GTCGACTGGTCCTGTTCCCATCTCTCTGAAACTTAGATGGATGCATCTGTGAACGCCAAG AAGAAGGTTAGTTTCTGTGGGAACACCGGCCACAGCCGCTGCGGTGAAGTTCATTTAGCT GCGGTGTGCTCCGGTCTGTGCTTAGTATTGCAGGTTTGGTTTGCATTTCCGTTCAAGTAT AAAGGAAGCAGTATTTGGCATGGCATTTGAATAGCGTCGGAACCTAGAAAACAGTGTTCC AGCAGTATTACGTCACACTGGTGTTATACTATTATAGAAAAACATGGTGGACGTAGAACT GTTTGTTAAGGAGACTAGTGATCACAGCATCAGCTCTGAGGAAGAAGATATCCTTGTCAG GAGCTGTAGCAATCTCAATGTGAGCTTTGGATACCATTGTGATTCTCATCAGAGTTTTTC TCCTGAAAATGATCATGGCAATGGCATTTCTCCTAAGAACACGTTTGGGACTAATACCAT GATGGGGTCACGAAATGGCTCATTCACTTGTTTATCTGGTGCTGCTATTAGTGCAAATTT CACACTGGCAAATACAAACATTTGCAATGGTCTTATTGGCGAAGAAATTTTACCAGAACT AGATTCTCCAAACTCCTTTAGAAAAATTGTTTCTTCTCCATCAATGTCAAGATTGGACTC GTTCTCCACCTCACAAGGAAGTCCTGTGTCAACTGAGAGCTCTATATTTGAGATCAGTAA AAACCTTTGGAGGTCCAGTGCACCAACAACTGTATCATCCAATTTTCTGACTAATACAGA GGTGAAAATGGCTGGGGGAGCTGCTGGAGAGGATAGAGTCCAAGCTGTGTGCTCAGAGAA AAATGGATGGCTGATTTGTGGGATATATGATGGGTTTAATGGGAGGGATGCAGCTGATTT TCTTGCAGTAACTCTATATGATAACATAGTATATTACTTGTACCTGCTGGAGAATCGGAT AAAGCAACAAAATGGTCTGTACAATTCATCAGAAAGCTCTCTCGATGGTCTTAAAAGTGA GTTAACACTAGCCATGAGAAACTCAGAGAATGAAGACATAAAATTTTCTGAAACATTTCG ATCTGGCGTGCTGAATTGCCTTTCTACTGCTGTTGAGCAAGCCGAGAATGACTTTTTATG CATGGTTGAACAAGAGATGGATGATAGACCAGATTTAGTTTCAGTAGGGTCTTGTGTTCT GGTTCTTCTTCTTCATGGAACAGATCTGTGCATCTTAAATATGGGGGACAGTAGAGCTGT GCTTGCTTCCATGCCATATGTAGAAAATGGTGCTTTGAAGGCTGCTCAACTGACAGAGAC CCACTCACTTGAAAATCCTTCGGAATACCAAAGACTTTTAGCTGCTCATCCCAATGATTC TTCAGTTGTCAGGGGTAACAAAATAAAAGGAAAGCTGAAGGTTACTCGTGCTTTTGGAGT TGGCTATCTGAAGCAGAGGAAGTTCAATGATGCACTCATGGGCATTCTACGAGTCCGCGA TTTGAGCAGCCCTCCATATGTTTACACAAATCCACACACATTGAGTCACAAAGTTACAGA TGATGATTTGTTCGTTGTGCTTGGTAGTGATGGCCTATTTGATTTCTTCAGTAATGATGA AGTTGTTCTGTTGGTTTATCAATTTATGCACGATAATCCAATGGGGGATCCTGCAAAATA TCTTATCGAGCAACTTATACTCAAAGCAGCCAAGGAAGCAGCTTTAACAGCCGAAGAATT GATGAGGATACCTGTTGGGAGTAGGAGAAAGTACCACGATGATGTGACTGTCGTTGTTAT CACCCTTGGAAATGCACAGAGAACGATGACTGCGTCAACATCCATGTGAAAGAATGGAGA GCTAGAGAGACGGGCTATATCAGCTGGTAATTTTTGTGGGTTTTTGCATACGTGTCCTCC AAATTACAAGCCCTTTTTTTTGTTGAGATTGGCGTGTGGTAGTCAGTAAACCCGAATAAA AATGTATATATTGTTTTGGAATTTGGGAAGTGAACAAAAACCTTTTGT