Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d025278_T065
CDS Infomation

cds chromosome:B73_RefGen_v4:10:112303006:112307670:1 gene:Zm00001d025278 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein MEI2-like 1
Sequence

ATGATGACCTGCACCAGATATTTGGTGTCTTTGGTGAAATCAAGGAGGAGTGAAATTTCA
GGAAATAAAAACAAATTGGAGCCTAGCTGTCTGGGTGGTACTGAACGTTTGATGCAGCAG
ATGTCTCGTGCATTGGAACATGAACAGTTTGGTGCATGTAAACTCGGAAGCCCAAACAGT
CCTTCAACATGCTTTGGTTCTGTCAATATGGCACCCATCAGATCCACTAGCACAGAAAGT
GGAACTGTTCAGGTTTTATGTTCTAGAGTTCAGACACCGATAAACCAATTCCGAGAGGGA
AGGAATTTTCTGGATCTTCCCTCAACTACCATAAGTAGATCCTCTCCTGTTGGAATTACA
CCTGCAGGATTACAAAGCGGCCACCACGCTCTTGATGAGCACATCCATTCACTTGGAAAG
ATGAATGTACAGAACAAGGGACGAATGGATTGTGGATTTCAAGAGAGTACTGCTTTCCAT
CCTCATTCTCTCCCTGACTTCAATGACAGACTAAGAAATGGTATCTCCTATAACTGCTCA
ATACCTCCCATCGGTGTTAAGAGCAATGCTAGAGCTGCTGAAGCAATGGATGTCAGGCAC
ATTTACAAAGGAGGTTGTGGGCATCTCAGCAATCAATCTTCTGCTCATACTGAAGCACTT
GGGTTTTCAAGAACTGGTAGCTGCCCTCTCTATGGTCACCAACTAGCATGGAGTAATTCT
AATAACCTACACCAGCAGCCTTCTTCTCCCATGATATGGCCTAGCATGGGCCCATTTACC
AATAATATGCCATCTCGCCAGTTGATGCAAGTGCATGGAATTTCAAGAGCACCATTGCGC
ATGCTTGAAAATAATATCCCTATGAATCACCAACATGTGGGATCTGCCCCAGCTGTCAAT
CCATCAATTTGGGATAGACGACATGGATATGCAGGGGAGATGATGGAAACACCAGGATTC
CACCCAGGGAGTGCTGGAAGCATGGGTTTCCCTGGCAGCACACATCTGCATCAGTTGGAG
ACCAATGGTATGTTTCCTCACAATGGAGGGACTTTCATGGACCCAGCTATGTCTCCTGTG
CACATGAGTGCTCGCTCTCCTCAGCAGAGGGGGCATATTTTCCATCGAAGGAGCAATGTG
GCTCCTATTCCATCCTCTTTCGATTCTGCTGGTGAACGGATGCGGAGCCGAAGAAATGAC
TCGAATGTAAATCAATCTGACAACAAAAGGCTGTTTGAGCTTGACATTGAGCGTATAGTC
CGGGGCGAGGACTCCCGGACTACACTGATGATAAAGAATATCCCAAACAAGTACACATCA
AAGATGCTTCTGGCAGCTATTGATGAAAGTCACCGGGGAACTTATGATTTTATCTACCTG
CCAATTGACTTTAAGAATAAGTGCAATGTTGGTTATGCATTCATCAACATGATCAATCCT
GACAATATTGTTCCATTTTATAAGACATTTCATGGGAAAAGGTGGGAGAAATTCAACAGT
GAGAAAGTGGCCTCACTTGCTTATGCTAGAATCCAAGGAAAATCAGCTCTAGTTGCTCAT
TTCCAGAACTCAAGTTTGATGAATGAGGATAAACGCTGCCGCCCTATACTCTTCCACTCT
GATGGTCCGAATGCAGGAGATCAAGAACCATTCCCTGTGGGATCAAATGTCCGTTCCAGG
CCTGGAAGGTCCAGGATTTTGAGTTGGGAACAAAACCACCAGGACATTGTGTCTGATCAT
ACCAAAGGTGGAACTCCGAGCAGGGCTGGTGGCACTCCAGGTTACATCGCCACGGATACT
GATCATACGGCTGTTGATTGA

Peptide Sequence

PEP ID

Zm00001d025278_P065
PEP Infomation

pep chromosome:B73_RefGen_v4:10:112303006:112307670:1 gene:Zm00001d025278 transcript:Zm00001d025278_T065 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein MEI2-like 1
Sequence

MMTCTRYLVSLVKSRRSEISGNKNKLEPSCLGGTERLMQQMSRALEHEQFGACKLGSPNS
PSTCFGSVNMAPIRSTSTESGTVQVLCSRVQTPINQFREGRNFLDLPSTTISRSSPVGIT
PAGLQSGHHALDEHIHSLGKMNVQNKGRMDCGFQESTAFHPHSLPDFNDRLRNGISYNCS
IPPIGVKSNARAAEAMDVRHIYKGGCGHLSNQSSAHTEALGFSRTGSCPLYGHQLAWSNS
NNLHQQPSSPMIWPSMGPFTNNMPSRQLMQVHGISRAPLRMLENNIPMNHQHVGSAPAVN
PSIWDRRHGYAGEMMETPGFHPGSAGSMGFPGSTHLHQLETNGMFPHNGGTFMDPAMSPV
HMSARSPQQRGHIFHRRSNVAPIPSSFDSAGERMRSRRNDSNVNQSDNKRLFELDIERIV
RGEDSRTTLMIKNIPNKYTSKMLLAAIDESHRGTYDFIYLPIDFKNKCNVGYAFINMINP
DNIVPFYKTFHGKRWEKFNSEKVASLAYARIQGKSALVAHFQNSSLMNEDKRCRPILFHS
DGPNAGDQEPFPVGSNVRSRPGRSRILSWEQNHQDIVSDHTKGGTPSRAGGTPGYIATDT
DHTAVD

Transcript Sequence

Transcript ID

Zm00001d025278_T065
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:112303006:112307670:1 gene:Zm00001d025278 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein MEI2-like 1
Sequence

AAACTTGACATACGTTACTCGAGTCCAAAGGACTATCCTTTGGATAAAGATATCAACCTG
TCCATGGTAATAGTTAATCTTGAAGCTTCGATAACTAATGATGACCTGCACCAGATATTT
GGTGTCTTTGGTGAAATCAAGGAGGAGTGAAATTTCAGGAAATAAAAACAAATTGGAGCC
TAGCTGTCTGGGTGGTACTGAACGTTTGATGCAGCAGATGTCTCGTGCATTGGAACATGA
ACAGTTTGGTGCATGTAAACTCGGAAGCCCAAACAGTCCTTCAACATGCTTTGGTTCTGT
CAATATGGCACCCATCAGATCCACTAGCACAGAAAGTGGAACTGTTCAGGTTTTATGTTC
TAGAGTTCAGACACCGATAAACCAATTCCGAGAGGGAAGGAATTTTCTGGATCTTCCCTC
AACTACCATAAGTAGATCCTCTCCTGTTGGAATTACACCTGCAGGATTACAAAGCGGCCA
CCACGCTCTTGATGAGCACATCCATTCACTTGGAAAGATGAATGTACAGAACAAGGGACG
AATGGATTGTGGATTTCAAGAGAGTACTGCTTTCCATCCTCATTCTCTCCCTGACTTCAA
TGACAGACTAAGAAATGGTATCTCCTATAACTGCTCAATACCTCCCATCGGTGTTAAGAG
CAATGCTAGAGCTGCTGAAGCAATGGATGTCAGGCACATTTACAAAGGAGGTTGTGGGCA
TCTCAGCAATCAATCTTCTGCTCATACTGAAGCACTTGGGTTTTCAAGAACTGGTAGCTG
CCCTCTCTATGGTCACCAACTAGCATGGAGTAATTCTAATAACCTACACCAGCAGCCTTC
TTCTCCCATGATATGGCCTAGCATGGGCCCATTTACCAATAATATGCCATCTCGCCAGTT
GATGCAAGTGCATGGAATTTCAAGAGCACCATTGCGCATGCTTGAAAATAATATCCCTAT
GAATCACCAACATGTGGGATCTGCCCCAGCTGTCAATCCATCAATTTGGGATAGACGACA
TGGATATGCAGGGGAGATGATGGAAACACCAGGATTCCACCCAGGGAGTGCTGGAAGCAT
GGGTTTCCCTGGCAGCACACATCTGCATCAGTTGGAGACCAATGGTATGTTTCCTCACAA
TGGAGGGACTTTCATGGACCCAGCTATGTCTCCTGTGCACATGAGTGCTCGCTCTCCTCA
GCAGAGGGGGCATATTTTCCATCGAAGGAGCAATGTGGCTCCTATTCCATCCTCTTTCGA
TTCTGCTGGTGAACGGATGCGGAGCCGAAGAAATGACTCGAATGTAAATCAATCTGACAA
CAAAAGGCTGTTTGAGCTTGACATTGAGCGTATAGTCCGGGGCGAGGACTCCCGGACTAC
ACTGATGATAAAGAATATCCCAAACAAGTACACATCAAAGATGCTTCTGGCAGCTATTGA
TGAAAGTCACCGGGGAACTTATGATTTTATCTACCTGCCAATTGACTTTAAGAATAAGTG
CAATGTTGGTTATGCATTCATCAACATGATCAATCCTGACAATATTGTTCCATTTTATAA
GACATTTCATGGGAAAAGGTGGGAGAAATTCAACAGTGAGAAAGTGGCCTCACTTGCTTA
TGCTAGAATCCAAGGAAAATCAGCTCTAGTTGCTCATTTCCAGAACTCAAGTTTGATGAA
TGAGGATAAACGCTGCCGCCCTATACTCTTCCACTCTGATGGTCCGAATGCAGGAGATCA
AGAACCATTCCCTGTGGGATCAAATGTCCGTTCCAGGCCTGGAAGGTCCAGGATTTTGAG
TTGGGAACAAAACCACCAGGACATTGTGTCTGATCATACCAAAGGTGGAACTCCGAGCAG
GGCTGGTGGCACTCCAGGTTACATCGCCACGGATACTGATCATACGGCTGTTGATTGACG
AACTTGCGACAACACCCGACATTCTGACAATTGCAATCCAGTTTTTTTTTTTTTTGAAAT
TGCATCCTCTCCTACCTCTTTTTTCCTTTTGTTATGTTGTATCTATATCTACTTCCGCGT
GATATTTTGGCACCGGAGGCTCTAGACGGCTGCAGATTTGGTCGCTGACAAGTAGCGAGG
AGATGGATGTTGTGCCGTCAGTTTCTCCTTACTTTGGCACAGACCCCTCAGCGGGATTTT
GTTGGACAGTTTGACCCCCTTTCACCAGGAAAGATATCCATATTTGGGGGAGTTTCCCTA
TTGCTGTTTGGCAGTGCTGTCATGAACATTTTCCTAATGCTGTGGATGTGAAATTTCAGA
AT