Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d025275_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:10:112168325:112188744:-1 gene:Zm00001d025275 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative homeodomain-like transcription factor superfamily protein

Sequence

ATGTCAAACGCTGGCGAGGCGAGAGGAGTGGGAACGGGCCGCGGGTCGCGGCTGCCGCGG
TGGACGCGGCAGGAGATACTGGTGCTCGTCGAGGGGAAGCGGGTGGTGGAGGGGAGCGGG
CGCGGCCGGGGCCGCGGCCGGGTACGCGGAGGCGAGGGCGCGGAGCCGACCAAGTGGGCC
GCGGTGGCGGAGTACTGCCGGCGCCACGGCGTGGACCGCGGGCCCGTGCAGTGCCGCAAG
CGCTGGAGCAACCTCGCCGGAGACTACAAGAAGATCAGGGAGTGGGAGCGCGGGTACGCG
GCCAGGAAGGAGGCCTCCTTCTGGGACATGCGCAACGACGCGCGCCGGGAGAGGCGCCTC
CCGGGCTTCTTCGACCGGGAGGTCTACGACATCCTCGAGGGCCGCGCCGGCGGTAATGCG
GCGGCGCTGGAGGACGTGGACGGCAAGGAGGAGGAGGCGAAGGCGGTGGTCCACGCTGGC
CGCGCGGTCCAACGGGGTGGCCTCTTCTCCTCGTCTGAGGACGAGGATGACCAAGAAGAA
GACGCGGCCACGCCAAGCCCGACGCCGGCGCCGGCTGCGGTGGCCGTGCCGATCCCCGGA
GAGCAAGCTGTTGCTGTTCCATCCTTCCTAGAAATGGCGCGTGCCTCCTCTCTTTCAGTG
CACGTTACAGAGAAGACGACTGATGTGCCCAGGCAAGCGAGCTCCGAGCAAGCAGGCGCG
TCAAACGAAAAGCAGTCGGAGCAGATCACCGAGGACTCACCAACGCAGTGTGGGCAGAAG
AGGCAGCGCAGCGACGACAATGCCTCTGGAGAAGCCACGACCAACCTGCAGGGGCAGCTG
GTTGAGATCCTAGACCGGAGCAGTCAGATGGTGGCGGCGCAGCTAGAGGCGCAGAACGTC
AACAGCCGGTTGAACAGGGAGCAGAGGAAGGACCAAGTGAGCAGCCTGCTTGGTGTGCTT
GGCAAGGTGGCTGATGCCCTCTACAGAATTGCTGATGAGCTGTAG

Peptide Sequence

PEP ID

Zm00001d025275_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:10:112168325:112188744:-1 gene:Zm00001d025275 transcript:Zm00001d025275_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative homeodomain-like transcription factor superfamily protein

Sequence

MSNAGEARGVGTGRGSRLPRWTRQEILVLVEGKRVVEGSGRGRGRGRVRGGEGAEPTKWA
AVAEYCRRHGVDRGPVQCRKRWSNLAGDYKKIREWERGYAARKEASFWDMRNDARRERRL
PGFFDREVYDILEGRAGGNAAALEDVDGKEEEAKAVVHAGRAVQRGGLFSSSEDEDDQEE
DAATPSPTPAPAAVAVPIPGEQAVAVPSFLEMARASSLSVHVTEKTTDVPRQASSEQAGA
SNEKQSEQITEDSPTQCGQKRQRSDDNASGEATTNLQGQLVEILDRSSQMVAAQLEAQNV
NSRLNREQRKDQVSSLLGVLGKVADALYRIADEL

Transcript Sequence

Transcript ID

Zm00001d025275_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:112168325:112188744:-1 gene:Zm00001d025275 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative homeodomain-like transcription factor superfamily protein

Sequence

GGGAAAGGGCCAAGGAGCGAGAGCTCGCCGTACGTGAGCCGGGGGCGGCATGTCAAACGC
TGGCGAGGCGAGAGGAGTGGGAACGGGCCGCGGGTCGCGGCTGCCGCGGTGGACGCGGCA
GGAGATACTGGTGCTCGTCGAGGGGAAGCGGGTGGTGGAGGGGAGCGGGCGCGGCCGGGG
CCGCGGCCGGGTACGCGGAGGCGAGGGCGCGGAGCCGACCAAGTGGGCCGCGGTGGCGGA
GTACTGCCGGCGCCACGGCGTGGACCGCGGGCCCGTGCAGTGCCGCAAGCGCTGGAGCAA
CCTCGCCGGAGACTACAAGAAGATCAGGGAGTGGGAGCGCGGGTACGCGGCCAGGAAGGA
GGCCTCCTTCTGGGACATGCGCAACGACGCGCGCCGGGAGAGGCGCCTCCCGGGCTTCTT
CGACCGGGAGGTCTACGACATCCTCGAGGGCCGCGCCGGCGGTAATGCGGCGGCGCTGGA
GGACGTGGACGGCAAGGAGGAGGAGGCGAAGGCGGTGGTCCACGCTGGCCGCGCGGTCCA
ACGGGGTGGCCTCTTCTCCTCGTCTGAGGACGAGGATGACCAAGAAGAAGACGCGGCCAC
GCCAAGCCCGACGCCGGCGCCGGCTGCGGTGGCCGTGCCGATCCCCGGAGAGCAAGCTGT
TGCTGTTCCATCCTTCCTAGAAATGGCGCGTGCCTCCTCTCTTTCAGTGCACGTTACAGA
GAAGACGACTGATGTGCCCAGGCAAGCGAGCTCCGAGCAAGCAGGCGCGTCAAACGAAAA
GCAGTCGGAGCAGATCACCGAGGACTCACCAACGCAGTGTGGGCAGAAGAGGCAGCGCAG
CGACGACAATGCCTCTGGAGAAGCCACGACCAACCTGCAGGGGCAGCTGGTTGAGATCCT
AGACCGGAGCAGTCAGATGGTGGCGGCGCAGCTAGAGGCGCAGAACGTCAACAGCCGGTT
GAACAGGGAGCAGAGGAAGGACCAAGTGAGCAGCCTGCTTGGTGTGCTTGGCAAGGTGGC
TGATGCCCTCTACAGAATTGCTGATGAGCTGTAGCCGCCGCCACTACGTGTCTTGAGCAC
AGTAGATAAACGCTGCAAGAATGTACAGATTGATATTGTGGATTTTGGTTCTGAAATTTG
GTCACAAACCTGAAATGGGATGCCCTATTTTGTAACCCATGGGATATTGTATTTGTATGC
CCCTATGTCCCCAAAACTGTTTATTCT