Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d025267_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:10:111824846:111828494:1 gene:Zm00001d025267 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:high chlorophyll fluorescence106c description:High chlorophyll fluorescence106c

Sequence

ATGACGCCGACGGCGAGCCTCCTCCTCCCGGCTCCCCCATTCGTCTCTATCTCCGATGTG
CGCCGCCTCCAGCTCCCCCCGCGCGGCGGCCACCGGCCTCGCCCCTGCTGGAAGGGCTTG
GAGTGCGGCTCCGTACAGACGCGGATGGTCTCTTCTTTCGTTGCTGTAGGGAGCAGAACA
CGCCGCAGAAACGTTATATGTGCTTCCCTGTTCGGAGTTGGAGCTCCCGAAGCACTGGTC
ATTGGAGTAGTCGCCTTGTTGGTGTTCGGCCCCAAGGGTCTAGCAGAGGTAGCCAGGAAT
TTGGGGAAGACTTTGCGTGCTTTCCAACCAACCATTAGAGAGATACAGGATGTATCAAGG
GAGTTCAGGAGCACTCTTGAACGAGAAATCGGAATTGATGAGGTTTCCCAGTCGACGAAT
TATACACCCACGACCATGAATAACAACCAACAACCTGCTGCCGACTCAAATATCAAGCCT
GCACCTGCACCTTACACCAGCGATGAACTTGTGAAAGTAACTGAAGAACAAATTGCTGCA
TCAGCTGCTGCAGCTTGGAACCCGCAACAACCTGCATCGTCGCAACAGCAAGCAGAAGTG
TACACTACTCCGAGTGAGGACGCTCCTACATCAGGAGGAAGCGATGGTCCTGCTGCTCCA
GCTCTTGCTGCGAGTGACTCGGATCCAAAGCAAGTGAATCTGGACAAGGCGGAAACACAG
AGATGA

Peptide Sequence

PEP ID

Zm00001d025267_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:10:111824846:111828494:1 gene:Zm00001d025267 transcript:Zm00001d025267_T002 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:high chlorophyll fluorescence106c description:High chlorophyll fluorescence106c

Sequence

MTPTASLLLPAPPFVSISDVRRLQLPPRGGHRPRPCWKGLECGSVQTRMVSSFVAVGSRT
RRRNVICASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIREIQDVSR
EFRSTLEREIGIDEVSQSTNYTPTTMNNNQQPAADSNIKPAPAPYTSDELVKVTEEQIAA
SAAAAWNPQQPASSQQQAEVYTTPSEDAPTSGGSDGPAAPALAASDSDPKQVNLDKAETQ
R

Transcript Sequence

Transcript ID

Zm00001d025267_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:111824846:111828494:1 gene:Zm00001d025267 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:high chlorophyll fluorescence106c description:High chlorophyll fluorescence106c

Sequence

TCCGCAAGCAAATCCTCCTATCTCCAAGCCTCCAATCTGTGAACGGTGAACCCCAATCGA
ATGACGCCGACGGCGAGCCTCCTCCTCCCGGCTCCCCCATTCGTCTCTATCTCCGATGTG
CGCCGCCTCCAGCTCCCCCCGCGCGGCGGCCACCGGCCTCGCCCCTGCTGGAAGGGCTTG
GAGTGCGGCTCCGTACAGACGCGGATGGTCTCTTCTTTCGTTGCTGTAGGGAGCAGAACA
CGCCGCAGAAACGTTATATGTGCTTCCCTGTTCGGAGTTGGAGCTCCCGAAGCACTGGTC
ATTGGAGTAGTCGCCTTGTTGGTGTTCGGCCCCAAGGGTCTAGCAGAGGTAGCCAGGAAT
TTGGGGAAGACTTTGCGTGCTTTCCAACCAACCATTAGAGAGATACAGGATGTATCAAGG
GAGTTCAGGAGCACTCTTGAACGAGAAATCGGAATTGATGAGGTTTCCCAGTCGACGAAT
TATACACCCACGACCATGAATAACAACCAACAACCTGCTGCCGACTCAAATATCAAGCCT
GCACCTGCACCTTACACCAGCGATGAACTTGTGAAAGTAACTGAAGAACAAATTGCTGCA
TCAGCTGCTGCAGCTTGGAACCCGCAACAACCTGCATCGTCGCAACAGCAAGCAGAAGTG
TACACTACTCCGAGTGAGGACGCTCCTACATCAGGAGGAAGCGATGGTCCTGCTGCTCCA
GCTCTTGCTGCGAGTGACTCGGATCCAAAGCAAGTGAATCTGGACAAGGCGGAAACACAG
AGATGACTCCGCTTAACAGCTTGACACTGGATGGGATGAGCACACTGAACACGTCAGGAC
GAGCAGTCTTATTTTAATTTTGTAGGCGATGGACTTCAGATTAAAGCCAGTTATTTGGAC
TGCTTAGGCTTGTTCTGTAGCAGCATGCATGGGCAGGTTCATACAAAAAGGCTATGTGTA
T