Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d025258_T009
CDS Infomation

cds chromosome:B73_RefGen_v4:10:111489893:111495229:1 gene:Zm00001d025258 gene_biotype:protein_coding transcript_biotype:protein_coding description:Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex

Sequence

ATGGCGTCCCGCGTCGCCTCGGGCCTCCTCCGCCGCCGCGCCGGCGCCACACTAGGCCTC
CTAAGGAGTTATGCACATGTCAGAAGCTACAACAGTCAACTTTCAGCTTTGGTTTCTGCT
ACATCTGAATGCTCAAATCTGCCGAGAAGATGCTATTACTTACCTAATCCCTCTCCATAC
CAAGTTTGGAGTAGGTCATTTGCTTCAGACAACGGAGACAAGTTTGAGGCTGTTGTGCCC
TTCATGGGTGAATCTGTAACTGATGGAACTCTTGCTAACTTCTTAAAGAAACCTGGAGAC
AGAGTCGAGGCTGATGAACCTATAGCGCAGATTGAAACTGATAAGGTCACTATAGATGTC
GCAAGTCCTGAGGCTGGTGTTATTGAAAAGCTCATTGCTAGTGAAGGCGACACAGTTACT
CCAGGCACTAAAGTTGCAATCATATCCAAGTCTGCTCAACCTGCTGAAACACATGTTGCT
CCATCAGAGGAAGCAACTTCAAAAGAATCATCTCCACCAAAAGTTGAAGATAAACCAAAG
GTAGAGGAAAAAGCCCCAAAAGTAGATCCTCCCAAGATGCAAGCACCAAAGCCAACTGCA
CCATCAAAAACATCCCCTTCAGAACCACAGCTCCCTCCAAAAGAACGAGAGCGGCGGGTG
CCAATGCCAAGGCTCAGGAAGCGTATTGCAAACCGTCTTAAGGATTCTCAGAACACCTTT
GCAATGCTGAGTACATTTAATGAAGTTGACATGACCAATTTGATGAAGCTTCGTTCTGAT
TATAAAGATGAATTTGTCACAAAGCATGGTGTAAAATTGGGTCTTATGTCTTGCTTTGTC
AAGGCTGCTGTTTCTGCACTTCAAAACCAGCCAATTGTCAATGCTGTCATTGATGGTGAT
GACATCATATACAGAGACTACGTAGACATCAGTGTTGCTGTTGGCACTTCCAAGGGCCTT
GTGGTTCCTGTTATCCGAGATGCTGATACCATGAACTTTGCTGACATTGAGAAAGGGATA
AACAACCTTGCAAAGAAAGCAACTGAGGGGGCGCTCTCAATTGATGACATGGCAGGTGGA
ACATTCACCATCTCCAACGGTGGTGTCTATGGAAGCCTCCTCAGCACACCTATCATCAAC
CCTCCACAGTCGTCTATTCTGGGGATGCATTCCATTGTGCAACGCCCTGTGGTTGTGAAT
GGTGACATCCTTGCGAGGCCAATGATGTACCTTGCGCTGACTTACGACCACAGGTTGATC
GATGGCAGAGAGGCTGTCTTCTTCCTGCGGCGCATCAAGGATGTTGTCGAGGACCCCAGG
AGGTTGCTGCTTGACATATAA

Peptide Sequence

PEP ID

Zm00001d025258_P009
PEP Infomation

pep chromosome:B73_RefGen_v4:10:111489893:111495229:1 gene:Zm00001d025258 transcript:Zm00001d025258_T009 gene_biotype:protein_coding transcript_biotype:protein_coding description:Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex

Sequence

MASRVASGLLRRRAGATLGLLRSYAHVRSYNSQLSALVSATSECSNLPRRCYYLPNPSPY
QVWSRSFASDNGDKFEAVVPFMGESVTDGTLANFLKKPGDRVEADEPIAQIETDKVTIDV
ASPEAGVIEKLIASEGDTVTPGTKVAIISKSAQPAETHVAPSEEATSKESSPPKVEDKPK
VEEKAPKVDPPKMQAPKPTAPSKTSPSEPQLPPKERERRVPMPRLRKRIANRLKDSQNTF
AMLSTFNEVDMTNLMKLRSDYKDEFVTKHGVKLGLMSCFVKAAVSALQNQPIVNAVIDGD
DIIYRDYVDISVAVGTSKGLVVPVIRDADTMNFADIEKGINNLAKKATEGALSIDDMAGG
TFTISNGGVYGSLLSTPIINPPQSSILGMHSIVQRPVVVNGDILARPMMYLALTYDHRLI
DGREAVFFLRRIKDVVEDPRRLLLDI

Transcript Sequence

Transcript ID

Zm00001d025258_T009
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:111489893:111495229:1 gene:Zm00001d025258 gene_biotype:protein_coding transcript_biotype:protein_coding description:Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex

Sequence

GGGGAACTACAGAAAAGGGTCCGAATCGAATCCGTGGTGCACTGCCCCTTCCTCCCCCAC
AAGCCGCCGCCGCCGCCGTGAGGACTCCGGCGAATGGCGTCCCGCGTCGCCTCGGGCCTC
CTCCGCCGCCGCGCCGGCGCCACACTAGGCCTCCTAAGGAGTTATGCACATGTCAGAAGC
TACAACAGTCAACTTTCAGCTTTGGTTTCTGCTACATCTGAATGCTCAAATCTGCCGAGA
AGATGCTATTACTTACCTAATCCCTCTCCATACCAAGTTTGGAGTAGGTCATTTGCTTCA
GACAACGGAGACAAGTTTGAGGCTGTTGTGCCCTTCATGGGTGAATCTGTAACTGATGGA
ACTCTTGCTAACTTCTTAAAGAAACCTGGAGACAGAGTCGAGGCTGATGAACCTATAGCG
CAGATTGAAACTGATAAGGTCACTATAGATGTCGCAAGTCCTGAGGCTGGTGTTATTGAA
AAGCTCATTGCTAGTGAAGGCGACACAGTTACTCCAGGCACTAAAGTTGCAATCATATCC
AAGTCTGCTCAACCTGCTGAAACACATGTTGCTCCATCAGAGGAAGCAACTTCAAAAGAA
TCATCTCCACCAAAAGTTGAAGATAAACCAAAGGTAGAGGAAAAAGCCCCAAAAGTAGAT
CCTCCCAAGATGCAAGCACCAAAGCCAACTGCACCATCAAAAACATCCCCTTCAGAACCA
CAGCTCCCTCCAAAAGAACGAGAGCGGCGGGTGCCAATGCCAAGGCTCAGGAAGCGTATT
GCAAACCGTCTTAAGGATTCTCAGAACACCTTTGCAATGCTGAGTACATTTAATGAAGTT
GACATGACCAATTTGATGAAGCTTCGTTCTGATTATAAAGATGAATTTGTCACAAAGCAT
GGTGTAAAATTGGGTCTTATGTCTTGCTTTGTCAAGGCTGCTGTTTCTGCACTTCAAAAC
CAGCCAATTGTCAATGCTGTCATTGATGGTGATGACATCATATACAGAGACTACGTAGAC
ATCAGTGTTGCTGTTGGCACTTCCAAGGGCCTTGTGGTTCCTGTTATCCGAGATGCTGAT
ACCATGAACTTTGCTGACATTGAGAAAGGGATAAACAACCTTGCAAAGAAAGCAACTGAG
GGGGCGCTCTCAATTGATGACATGGCAGGTGGAACATTCACCATCTCCAACGGTGGTGTC
TATGGAAGCCTCCTCAGCACACCTATCATCAACCCTCCACAGTCGTCTATTCTGGGGATG
CATTCCATTGTGCAACGCCCTGTGGTTGTGAATGGTGACATCCTTGCGAGGCCAATGATG
TACCTTGCGCTGACTTACGACCACAGGTTGATCGATGGCAGAGAGGCTGTCTTCTTCCTG
CGGCGCATCAAGGATGTTGTCGAGGACCCCAGGAGGTTGCTGCTTGACATATAAATTCAT
GCACCAGCGCTGCGCTGCCCTGCCGGACTGTTTTGTGCAATTGTGCTTATCTGGAAATAA
TGCCATGGAAATTTTTGACTGATGAAAAAGAATTACTTCCTCAGAAAGACGAAATCTGAG
CTGAGGATACCGAGGTTTTTCTCTATATAATCGTAGAAGAGCAAACTCAACTCAACATGA
GGTCATGTTTAATTTTCGGATCTGAGATGTTCCATTACGGGATGCAGTTCCCACAAACAG
TCATTTTATTTAATATGCAAGAGCAATAGAGCTGCTGCATTTTTGTTTGTTGGTTCACAA
TTTCGCCTCCAGCTGGCCAGCCTGCAACTCGAGGAATCTGGATTGTATAATGTGACGTTG
GAGCGGTGCTGCAATCGCACGCTCTGTTGAATGGTCTCGACTTTAAACTCGTCCAACGTA
AAGTAGGAGGAAAGGGTATAAGTGTATAACAAAGGTAAAATGGATGAATCGAATCCGGAG
GAAAGGGTCTAGGAGTTTGGTATGGGTTACACTTTTTTATTTCCCATATTTTTTTGGTTT
TGGGAATGAAATGGATTGGAGTACCGTTATCTTATTTTTATAAGCTAACAATCAGTAACA
G