Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d025210_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:10:109225756:109231836:-1 gene:Zm00001d025210 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar protein-sorting-associated protein 11 homolog
Sequence	ATGTACCAGTGGCGCAAGTTCGAGTTCTTTGAGGAGAAGTCTGCCGGCCGCGGCGGCGGC GGGGGTTCAGCCGCCGCCGTGCCGGCCGAGATCGCGGGCCGAGTCACCTGCTGCTCGGGC GGCCGGGGCCGCGTCGCGGTGGGGTGCGACGACGGCACCGTGGGCCTTCTCGACCGCGGG TTCCGCCTCTCCTATGGCTTCCAGGCCTACGCCTCCTCGGTCCTCTTCCTCCAGCAGCTC AAGCAAAGAAATGTTCTTGTCACGGTTGGAGACGATGACCAGTCATCTTCTCAGGCATCA GCAATCTGTCTAAAGGTTTTTGACCTCGATAAAGTACAAGAAGAAGGATCAAGCACAACA ACTCCTTTCTGTGTTCAAATTTTGCGGATCTTCACTGATCAATTTCCTCAAGCAAAGATT ACATCATTTATGGTTCTAGAAGAAGCACCACCCATACTGATGATTGCCATTGGACTGGAC AATGGTTTCATTTATTGCATCAAAGGTGACATTGCACGTGAGCGTATTACACGTTTCAAG TTGCAAGTTGAGGCTGCTTCAGATGGCAGCACTAGTTTGCCTATTACTGGTCTTGGTTTT CGAGTTGAGGGGCAAGCACACCAGCTCTTTTCTGTAACTCCTGGTTCTGTAACCTTGTTC AGCTTGCATATTCAACCACCAAGGAGGCAAACACTTGATCAGATTGGTTGTCAGACGAAT GCTGTAGCAATGAGTGACCGTATGGACTTAATTATTGGTAGACCTGAAGCTGTATATTTC TACGAAGTTGATGGTAGAGGCCCTTGCTGGGCATTTGATGGTGAGAAAAAGTTTGTAGGT TGGTTTCGAGGCTATTTACTCTGCATTATTGAAGATCAGAGAACACATAAAAGCACACTT AATGTTTATGATCTTAAGAATCGGTTGATTGCACATAGCATGCCTGTGGGGGATGTTTCA CACTTAGTATGTGAGTGGGGTTATATTATTCTCATAATGTCAGACAAAAAGATTCTGTGC ATTGGAGAGAAAGACATGGAAAGTAAGCTTGATATGTTGTTCAAGAAAAATCTTTATACA GTTGCAATCAATCTTGTACAAAGTCAGCAGGCTGATCCTGCTTCCACTGCTGAGGTGCTG CGGAAGTATGGTGACCATCTGTATGGAAAACAGGAATATGATGAGGCTATGTCCCAGTAT ATCCACACTATTGGTCATCTTGAACCATCGTATGTTATACAGAAGTTCCTTGATGCAAAG CGCATCTACAACTTGACAAATTATTTAGAGAAGTTACATGATCGAGGGTTAGCATCTAAA GACCACACCACCCTTCTGTTGAACTGCTATACCAAATTGAAAGATGTGGAGAAACTTAAC CATTTTATCAAGGATGAAGATGGGGTTGGTGAGATCAAGTTTGATGTGGAAACTGCCATA AGAGTATGCCGAGCAGCTGGATATCATGAACATGCTATGTTTGTGGCAAAAAAGGCTGGG AGGCATGAGTTGTACTTGAAGATTTTACTTGAGGATCTTGGTAGATATGACGAGGCACTG CAATATATATCTGGCCTCGAGGCAAACCAGGCAGGTCTTACTGTAAAAGAATATGGGAAA ATTCTTGTGGAACATAGGCCTGCTGAAACAGTTGAAATACTGTTAAGGCTCTGTACAGAT GTTGGAGATCCTACGTCGAGAAGAGGTTCAAACAGTATGCACTTGCTTATGATACCATCC CCAATGGACTTTGTGAATATATTTGTGCACAGCCCGCAATATCTGATGGGATTTCTGGAA AATTATATCAAAACAGTAACGGACTCACCTGCGCAAACAGAAATTCATAACACCCTTCTG GAGCTCTATATTTCAAATGATTTGAGCTTCCCGTCTATCTCTCAAGAAAATGAATATGAG AATCACTATATCAAAGAAATAAAAGGTAAAGAAACTGCTAATGTCTATAGGTCAGGAATA AAGGAAAAAACTGGTCTTGGAAAAGAAGATCCTAAAGTAGCAAAGAATATTGTTGATAGG AGAAGGAAAGGGCTTGCGTTACTCAAATCTGCTTGGACATCTGAGATGGAAGATCCTTTG TATGATGTTGATCTTGCTCTCATTCTTTGTAACACTAATGCATTCAAAGATGGTTTGCTA TTTCTATATGAGAAACTAAAACTTTACAAAGAGGTTATTAGTTGTTACAAGCAAGCACAT GATCATCAAGGTTTAATTGCATGTTGCAAGAAGTTGGGGGACTCATCTCAAGGAGGGGAT CCTTCTCTCTGGGGGGATCTATTGAAGTATTTTGGGGATCTTGGGGAAGATTGCTCTAAA GAAGTTAAAGAGGTCTTGACCTACATTGAGAAAGAGGATGTTGTACCTCCCATCGTTGTG CTACAGACACTATCAAAAAACCCATGCTTGACACTCTCAGTCGTCAAAGATTACATTGCT CGCAAGCTTGAACAAGAATCAAAGCTAATTGAAGATGATAGAAAATCCATTGATAAGTAT CAGGCAGAGACAGAGTTGATGAAAAGGGAAATACAAGATCTCAAGACGAACGCGAAGGTT TTCCAACTGAGCAAGTGTAGCGCGTGCACTTTCACCCTTGATCTACCTGCTGTCCATTTC CTGTGCATGCACTCGTTCCACCTTCGCTGCCTTGGTGACAACGAAAAAGAATGCCCAGAA TGCGCGCCTGAATACAGATCCGTCATGGAGGCAAAGCAGAAGCTAGAGCAAAACGCCAGG GACCATGATCTCTTTTTCAGGCAGTTGAGGGGTTCCAAGGACGGCTTCTCTGTCATTGCA GACTATTTTAGCAAGGGCATAGTGAGCAAGACAACCTTACCTCCTGAGAATGGACGGTAG

Peptide Sequence

PEP ID	Zm00001d025210_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:10:109225756:109231836:-1 gene:Zm00001d025210 transcript:Zm00001d025210_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar protein-sorting-associated protein 11 homolog
Sequence	MYQWRKFEFFEEKSAGRGGGGGSAAAVPAEIAGRVTCCSGGRGRVAVGCDDGTVGLLDRG FRLSYGFQAYASSVLFLQQLKQRNVLVTVGDDDQSSSQASAICLKVFDLDKVQEEGSSTT TPFCVQILRIFTDQFPQAKITSFMVLEEAPPILMIAIGLDNGFIYCIKGDIARERITRFK LQVEAASDGSTSLPITGLGFRVEGQAHQLFSVTPGSVTLFSLHIQPPRRQTLDQIGCQTN AVAMSDRMDLIIGRPEAVYFYEVDGRGPCWAFDGEKKFVGWFRGYLLCIIEDQRTHKSTL NVYDLKNRLIAHSMPVGDVSHLVCEWGYIILIMSDKKILCIGEKDMESKLDMLFKKNLYT VAINLVQSQQADPASTAEVLRKYGDHLYGKQEYDEAMSQYIHTIGHLEPSYVIQKFLDAK RIYNLTNYLEKLHDRGLASKDHTTLLLNCYTKLKDVEKLNHFIKDEDGVGEIKFDVETAI RVCRAAGYHEHAMFVAKKAGRHELYLKILLEDLGRYDEALQYISGLEANQAGLTVKEYGK ILVEHRPAETVEILLRLCTDVGDPTSRRGSNSMHLLMIPSPMDFVNIFVHSPQYLMGFLE NYIKTVTDSPAQTEIHNTLLELYISNDLSFPSISQENEYENHYIKEIKGKETANVYRSGI KEKTGLGKEDPKVAKNIVDRRRKGLALLKSAWTSEMEDPLYDVDLALILCNTNAFKDGLL FLYEKLKLYKEVISCYKQAHDHQGLIACCKKLGDSSQGGDPSLWGDLLKYFGDLGEDCSK EVKEVLTYIEKEDVVPPIVVLQTLSKNPCLTLSVVKDYIARKLEQESKLIEDDRKSIDKY QAETELMKREIQDLKTNAKVFQLSKCSACTFTLDLPAVHFLCMHSFHLRCLGDNEKECPE CAPEYRSVMEAKQKLEQNARDHDLFFRQLRGSKDGFSVIADYFSKGIVSKTTLPPENGR

Transcript Sequence

Transcript ID	Zm00001d025210_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:10:109225756:109231836:-1 gene:Zm00001d025210 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar protein-sorting-associated protein 11 homolog
Sequence	GCGGTCGCACCACACGCGGCGCGCGTAGGCAACCGGTTCCAGCGCATCGGCCTCGTCCCT CCCTCCTGCTGTCCTGCACCCCAGCCGGTCGCCGAGCCCGATCGAGTTCCCGTCTAAGCC GCACGCCGTTCCGGCCCCGATCCGCCGCATCACGTCGGCCCGACATGTACCAGTGGCGCA AGTTCGAGTTCTTTGAGGAGAAGTCTGCCGGCCGCGGCGGCGGCGGGGGTTCAGCCGCCG CCGTGCCGGCCGAGATCGCGGGCCGAGTCACCTGCTGCTCGGGCGGCCGGGGCCGCGTCG CGGTGGGGTGCGACGACGGCACCGTGGGCCTTCTCGACCGCGGGTTCCGCCTCTCCTATG GCTTCCAGGCCTACGCCTCCTCGGTCCTCTTCCTCCAGCAGCTCAAGCAAAGAAATGTTC TTGTCACGGTTGGAGACGATGACCAGTCATCTTCTCAGGCATCAGCAATCTGTCTAAAGG TTTTTGACCTCGATAAAGTACAAGAAGAAGGATCAAGCACAACAACTCCTTTCTGTGTTC AAATTTTGCGGATCTTCACTGATCAATTTCCTCAAGCAAAGATTACATCATTTATGGTTC TAGAAGAAGCACCACCCATACTGATGATTGCCATTGGACTGGACAATGGTTTCATTTATT GCATCAAAGGTGACATTGCACGTGAGCGTATTACACGTTTCAAGTTGCAAGTTGAGGCTG CTTCAGATGGCAGCACTAGTTTGCCTATTACTGGTCTTGGTTTTCGAGTTGAGGGGCAAG CACACCAGCTCTTTTCTGTAACTCCTGGTTCTGTAACCTTGTTCAGCTTGCATATTCAAC CACCAAGGAGGCAAACACTTGATCAGATTGGTTGTCAGACGAATGCTGTAGCAATGAGTG ACCGTATGGACTTAATTATTGGTAGACCTGAAGCTGTATATTTCTACGAAGTTGATGGTA GAGGCCCTTGCTGGGCATTTGATGGTGAGAAAAAGTTTGTAGGTTGGTTTCGAGGCTATT TACTCTGCATTATTGAAGATCAGAGAACACATAAAAGCACACTTAATGTTTATGATCTTA AGAATCGGTTGATTGCACATAGCATGCCTGTGGGGGATGTTTCACACTTAGTATGTGAGT GGGGTTATATTATTCTCATAATGTCAGACAAAAAGATTCTGTGCATTGGAGAGAAAGACA TGGAAAGTAAGCTTGATATGTTGTTCAAGAAAAATCTTTATACAGTTGCAATCAATCTTG TACAAAGTCAGCAGGCTGATCCTGCTTCCACTGCTGAGGTGCTGCGGAAGTATGGTGACC ATCTGTATGGAAAACAGGAATATGATGAGGCTATGTCCCAGTATATCCACACTATTGGTC ATCTTGAACCATCGTATGTTATACAGAAGTTCCTTGATGCAAAGCGCATCTACAACTTGA CAAATTATTTAGAGAAGTTACATGATCGAGGGTTAGCATCTAAAGACCACACCACCCTTC TGTTGAACTGCTATACCAAATTGAAAGATGTGGAGAAACTTAACCATTTTATCAAGGATG AAGATGGGGTTGGTGAGATCAAGTTTGATGTGGAAACTGCCATAAGAGTATGCCGAGCAG CTGGATATCATGAACATGCTATGTTTGTGGCAAAAAAGGCTGGGAGGCATGAGTTGTACT TGAAGATTTTACTTGAGGATCTTGGTAGATATGACGAGGCACTGCAATATATATCTGGCC TCGAGGCAAACCAGGCAGGTCTTACTGTAAAAGAATATGGGAAAATTCTTGTGGAACATA GGCCTGCTGAAACAGTTGAAATACTGTTAAGGCTCTGTACAGATGTTGGAGATCCTACGT CGAGAAGAGGTTCAAACAGTATGCACTTGCTTATGATACCATCCCCAATGGACTTTGTGA ATATATTTGTGCACAGCCCGCAATATCTGATGGGATTTCTGGAAAATTATATCAAAACAG TAACGGACTCACCTGCGCAAACAGAAATTCATAACACCCTTCTGGAGCTCTATATTTCAA ATGATTTGAGCTTCCCGTCTATCTCTCAAGAAAATGAATATGAGAATCACTATATCAAAG AAATAAAAGGTAAAGAAACTGCTAATGTCTATAGGTCAGGAATAAAGGAAAAAACTGGTC TTGGAAAAGAAGATCCTAAAGTAGCAAAGAATATTGTTGATAGGAGAAGGAAAGGGCTTG CGTTACTCAAATCTGCTTGGACATCTGAGATGGAAGATCCTTTGTATGATGTTGATCTTG CTCTCATTCTTTGTAACACTAATGCATTCAAAGATGGTTTGCTATTTCTATATGAGAAAC TAAAACTTTACAAAGAGGTTATTAGTTGTTACAAGCAAGCACATGATCATCAAGGTTTAA TTGCATGTTGCAAGAAGTTGGGGGACTCATCTCAAGGAGGGGATCCTTCTCTCTGGGGGG ATCTATTGAAGTATTTTGGGGATCTTGGGGAAGATTGCTCTAAAGAAGTTAAAGAGGTCT TGACCTACATTGAGAAAGAGGATGTTGTACCTCCCATCGTTGTGCTACAGACACTATCAA AAAACCCATGCTTGACACTCTCAGTCGTCAAAGATTACATTGCTCGCAAGCTTGAACAAG AATCAAAGCTAATTGAAGATGATAGAAAATCCATTGATAAGTATCAGGCAGAGACAGAGT TGATGAAAAGGGAAATACAAGATCTCAAGACGAACGCGAAGGTTTTCCAACTGAGCAAGT GTAGCGCGTGCACTTTCACCCTTGATCTACCTGCTGTCCATTTCCTGTGCATGCACTCGT TCCACCTTCGCTGCCTTGGTGACAACGAAAAAGAATGCCCAGAATGCGCGCCTGAATACA GATCCGTCATGGAGGCAAAGCAGAAGCTAGAGCAAAACGCCAGGGACCATGATCTCTTTT TCAGGCAGTTGAGGGGTTCCAAGGACGGCTTCTCTGTCATTGCAGACTATTTTAGCAAGG GCATAGTGAGCAAGACAACCTTACCTCCTGAGAATGGACGGTAGTGAAGGACCACTGGTA CTCCGTTGCCTTGTACGACATTATATGGTGTTATTTCCCTTTCATGCACCGGGTTATGCA ATCTGGCCTGTTTCAGCCATGCAGTGAGGGTTTTTTTTTCTTTTTCTTTTTGGTTTGACA TTGTAGATACTCATTTTCCGGCAGTTTCTTTCTGAACCCAAGTGCATTTGCTTTGACATT GCTGTGCAGTTTTCCAGCATTGGGTTTCGATGTTTGGCTCGTGCCCTCCTACTTTTGAAA GAAGTATTATATGAATCATGTTTTTTGTACGTTTCAGC