Plant GARDEN How To ▶︎

JA

EN

Zea mays

CDS Sequence

CDS ID

Zm00001d025210_T002

CDS Infomation

cds chromosome:B73_RefGen_v4:10:109225756:109231836:-1 gene:Zm00001d025210 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar protein-sorting-associated protein 11 homolog

Sequence

ATGTACCAGTGGCGCAAGTTCGAGTTCTTTGAGGAGAAGTCTGCCGGCCGCGGCGGCGGC
GGGGGTTCAGCCGCCGCCGTGCCGGCCGAGATCGCGGGCCGAGTCACCTGCTGCTCGGGC
GGCCGGGGCCGCGTCGCGGTGGGGTGCGACGACGGCACCGTGGGCCTTCTCGACCGCGGG
TTCCGCCTCTCCTATGGCTTCCAGGCCTACGCCTCCTCGGTCCTCTTCCTCCAGCAGCTC
AAGCAAAGAAATGTTCTTGTCACGGTTGGAGACGATGACCAGTCATCTTCTCAGGCATCA
GCAATCTGTCTAAAGGTTTTTGACCTCGATAAAGTACAAGAAGAAGGATCAAGCACAACA
ACTCCTTTCTGTGTTCAAATTTTGCGGATCTTCACTGATCAATTTCCTCAAGCAAAGATT
ACATCATTTATGGTTCTAGAAGAAGCACCACCCATACTGATGATTGCCATTGGACTGGAC
AATGGTTTCATTTATTGCATCAAAGGTGACATTGCACGTGAGCGTATTACACGTTTCAAG
TTGCAAGTTGAGGCTGCTTCAGATGGCAGCACTAGTTTGCCTATTACTGGTCTTGGTTTT
CGAGTTGAGGGGCAAGCACACCAGCTCTTTTCTGTAACTCCTGGTTCTGTAACCTTGTTC
AGCTTGCATATTCAACCACCAAGGAGGCAAACACTTGATCAGATTGGTTGTCAGACGAAT
GCTGTAGCAATGAGTGACCGTATGGACTTAATTATTGGTAGACCTGAAGCTGTATATTTC
TACGAAGTTGATGGTAGAGGCCCTTGCTGGGCATTTGATGGTGAGAAAAAGTTTGTAGGT
TGGTTTCGAGGCTATTTACTCTGCATTATTGAAGATCAGAGAACACATAAAAGCACACTT
AATGTTTATGATCTTAAGAATCGGTTGATTGCACATAGCATGCCTGTGGGGGATGTTTCA
CACTTAGTATGTGAGTGGGGTTATATTATTCTCATAATGTCAGACAAAAAGATTCTGTGC
ATTGGAGAGAAAGACATGGAAAGTAAGCTTGATATGTTGTTCAAGAAAAATCTTTATACA
GTTGCAATCAATCTTGTACAAAGTCAGCAGGCTGATCCTGCTTCCACTGCTGAGGTGCTG
CGGAAGTATGGTGACCATCTGTATGGAAAACAGGAATATGATGAGGCTATGTCCCAGTAT
ATCCACACTATTGGTCATCTTGAACCATCGTATGTTATACAGAAGTTCCTTGATGCAAAG
CGCATCTACAACTTGACAAATTATTTAGAGAAGTTACATGATCGAGGGTTAGCATCTAAA
GACCACACCACCCTTCTGTTGAACTGCTATACCAAATTGAAAGATGTGGAGAAACTTAAC
CATTTTATCAAGGATGAAGATGGGGTTGGTGAGATCAAGTTTGATGTGGAAACTGCCATA
AGAGTATGCCGAGCAGCTGGATATCATGAACATGCTATGTTTGTGGCAAAAAAGGCTGGG
AGGCATGAGTTGTACTTGAAGATTTTACTTGAGGATCTTGGTAGATATGACGAGGCACTG
CAATATATATCTGGCCTCGAGGCAAACCAGGCAGGTCTTACTGTAAAAGAATATGGGAAA
ATTCTTGTGGAACATAGGCCTGCTGAAACAGTTGAAATACTGTTAAGGCTCTGTACAGAT
GTTGGAGATCCTACGTCGAGAAGAGGTTCAAACAGTATGCACTTGCTTATGATACCATCC
CCAATGGACTTTGTGAATATATTTGTGCACAGCCCGCAATATCTGATGGGATTTCTGGAA
AATTATATCAAAACAGTAACGGACTCACCTGCGCAAACAGAAATTCATAACACCCTTCTG
GAGCTCTATATTTCAAATGATTTGAGCTTCCCGTCTATCTCTCAAGAAAATGAATATGAG
AATCACTATATCAAAGAAATAAAAGGTAAAGAAACTGCTAATGTCTATAGGTCAGGAATA
AAGGAAAAAACTGGTCTTGGAAAAGAAGATCCTAAAGTAGCAAAGAATATTGTTGATAGG
AGAAGGAAAGGGCTTGCGTTACTCAAATCTGCTTGGACATCTGAGATGGAAGATCCTTTG
TATGATGTTGATCTTGCTCTCATTCTTTGTAACACTAATGCATTCAAAGATGGTTTGCTA
TTTCTATATGAGAAACTAAAACTTTACAAAGAGGTTATTAGTTGTTACAAGCAAGCACAT
GATCATCAAGGTTTAATTGCATGTTGCAAGAAGTTGGGGGACTCATCTCAAGGAGGGGAT
CCTTCTCTCTGGGGGGATCTATTGAAGTATTTTGGGGATCTTGGGGAAGATTGCTCTAAA
GAAGTTAAAGAGGTCTTGACCTACATTGAGAAAGAGGATGTTGTACCTCCCATCGTTGTG
CTACAGACACTATCAAAAAACCCATGCTTGACACTCTCAGTCGTCAAAGATTACATTGCT
CGCAAGCTTGAACAAGAATCAAAGCTAATTGAAGATGATAGAAAATCCATTGATAAGTAT
CAGGCAGAGACAGAGTTGATGAAAAGGGAAATACAAGATCTCAAGACGAACGCGAAGGTT
TTCCAACTGAGCAAGTGTAGCGCGTGCACTTTCACCCTTGATCTACCTGCTGTCCATTTC
CTGTGCATGCACTCGTTCCACCTTCGCTGCCTTGGTGACAACGAAAAAGAATGCCCAGAA
TGCGCGCCTGAATACAGATCCGTCATGGAGGCAAAGCAGAAGCTAGAGCAAAACGCCAGG
GACCATGATCTCTTTTTCAGGCAGTTGAGGGGTTCCAAGGACGGCTTCTCTGTCATTGCA
GACTATTTTAGCAAGGGCATAGTGAGCAAGACAACCTTACCTCCTGAGAATGGACGGTAG

Peptide Sequence

PEP ID

Zm00001d025210_P002

PEP Infomation

pep chromosome:B73_RefGen_v4:10:109225756:109231836:-1 gene:Zm00001d025210 transcript:Zm00001d025210_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar protein-sorting-associated protein 11 homolog

Sequence

MYQWRKFEFFEEKSAGRGGGGGSAAAVPAEIAGRVTCCSGGRGRVAVGCDDGTVGLLDRG
FRLSYGFQAYASSVLFLQQLKQRNVLVTVGDDDQSSSQASAICLKVFDLDKVQEEGSSTT
TPFCVQILRIFTDQFPQAKITSFMVLEEAPPILMIAIGLDNGFIYCIKGDIARERITRFK
LQVEAASDGSTSLPITGLGFRVEGQAHQLFSVTPGSVTLFSLHIQPPRRQTLDQIGCQTN
AVAMSDRMDLIIGRPEAVYFYEVDGRGPCWAFDGEKKFVGWFRGYLLCIIEDQRTHKSTL
NVYDLKNRLIAHSMPVGDVSHLVCEWGYIILIMSDKKILCIGEKDMESKLDMLFKKNLYT
VAINLVQSQQADPASTAEVLRKYGDHLYGKQEYDEAMSQYIHTIGHLEPSYVIQKFLDAK
RIYNLTNYLEKLHDRGLASKDHTTLLLNCYTKLKDVEKLNHFIKDEDGVGEIKFDVETAI
RVCRAAGYHEHAMFVAKKAGRHELYLKILLEDLGRYDEALQYISGLEANQAGLTVKEYGK
ILVEHRPAETVEILLRLCTDVGDPTSRRGSNSMHLLMIPSPMDFVNIFVHSPQYLMGFLE
NYIKTVTDSPAQTEIHNTLLELYISNDLSFPSISQENEYENHYIKEIKGKETANVYRSGI
KEKTGLGKEDPKVAKNIVDRRRKGLALLKSAWTSEMEDPLYDVDLALILCNTNAFKDGLL
FLYEKLKLYKEVISCYKQAHDHQGLIACCKKLGDSSQGGDPSLWGDLLKYFGDLGEDCSK
EVKEVLTYIEKEDVVPPIVVLQTLSKNPCLTLSVVKDYIARKLEQESKLIEDDRKSIDKY
QAETELMKREIQDLKTNAKVFQLSKCSACTFTLDLPAVHFLCMHSFHLRCLGDNEKECPE
CAPEYRSVMEAKQKLEQNARDHDLFFRQLRGSKDGFSVIADYFSKGIVSKTTLPPENGR

Transcript Sequence

Transcript ID

Zm00001d025210_T002

Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:109225756:109231836:-1 gene:Zm00001d025210 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar protein-sorting-associated protein 11 homolog

Sequence

GCGGTCGCACCACACGCGGCGCGCGTAGGCAACCGGTTCCAGCGCATCGGCCTCGTCCCT
CCCTCCTGCTGTCCTGCACCCCAGCCGGTCGCCGAGCCCGATCGAGTTCCCGTCTAAGCC
GCACGCCGTTCCGGCCCCGATCCGCCGCATCACGTCGGCCCGACATGTACCAGTGGCGCA
AGTTCGAGTTCTTTGAGGAGAAGTCTGCCGGCCGCGGCGGCGGCGGGGGTTCAGCCGCCG
CCGTGCCGGCCGAGATCGCGGGCCGAGTCACCTGCTGCTCGGGCGGCCGGGGCCGCGTCG
CGGTGGGGTGCGACGACGGCACCGTGGGCCTTCTCGACCGCGGGTTCCGCCTCTCCTATG
GCTTCCAGGCCTACGCCTCCTCGGTCCTCTTCCTCCAGCAGCTCAAGCAAAGAAATGTTC
TTGTCACGGTTGGAGACGATGACCAGTCATCTTCTCAGGCATCAGCAATCTGTCTAAAGG
TTTTTGACCTCGATAAAGTACAAGAAGAAGGATCAAGCACAACAACTCCTTTCTGTGTTC
AAATTTTGCGGATCTTCACTGATCAATTTCCTCAAGCAAAGATTACATCATTTATGGTTC
TAGAAGAAGCACCACCCATACTGATGATTGCCATTGGACTGGACAATGGTTTCATTTATT
GCATCAAAGGTGACATTGCACGTGAGCGTATTACACGTTTCAAGTTGCAAGTTGAGGCTG
CTTCAGATGGCAGCACTAGTTTGCCTATTACTGGTCTTGGTTTTCGAGTTGAGGGGCAAG
CACACCAGCTCTTTTCTGTAACTCCTGGTTCTGTAACCTTGTTCAGCTTGCATATTCAAC
CACCAAGGAGGCAAACACTTGATCAGATTGGTTGTCAGACGAATGCTGTAGCAATGAGTG
ACCGTATGGACTTAATTATTGGTAGACCTGAAGCTGTATATTTCTACGAAGTTGATGGTA
GAGGCCCTTGCTGGGCATTTGATGGTGAGAAAAAGTTTGTAGGTTGGTTTCGAGGCTATT
TACTCTGCATTATTGAAGATCAGAGAACACATAAAAGCACACTTAATGTTTATGATCTTA
AGAATCGGTTGATTGCACATAGCATGCCTGTGGGGGATGTTTCACACTTAGTATGTGAGT
GGGGTTATATTATTCTCATAATGTCAGACAAAAAGATTCTGTGCATTGGAGAGAAAGACA
TGGAAAGTAAGCTTGATATGTTGTTCAAGAAAAATCTTTATACAGTTGCAATCAATCTTG
TACAAAGTCAGCAGGCTGATCCTGCTTCCACTGCTGAGGTGCTGCGGAAGTATGGTGACC
ATCTGTATGGAAAACAGGAATATGATGAGGCTATGTCCCAGTATATCCACACTATTGGTC
ATCTTGAACCATCGTATGTTATACAGAAGTTCCTTGATGCAAAGCGCATCTACAACTTGA
CAAATTATTTAGAGAAGTTACATGATCGAGGGTTAGCATCTAAAGACCACACCACCCTTC
TGTTGAACTGCTATACCAAATTGAAAGATGTGGAGAAACTTAACCATTTTATCAAGGATG
AAGATGGGGTTGGTGAGATCAAGTTTGATGTGGAAACTGCCATAAGAGTATGCCGAGCAG
CTGGATATCATGAACATGCTATGTTTGTGGCAAAAAAGGCTGGGAGGCATGAGTTGTACT
TGAAGATTTTACTTGAGGATCTTGGTAGATATGACGAGGCACTGCAATATATATCTGGCC
TCGAGGCAAACCAGGCAGGTCTTACTGTAAAAGAATATGGGAAAATTCTTGTGGAACATA
GGCCTGCTGAAACAGTTGAAATACTGTTAAGGCTCTGTACAGATGTTGGAGATCCTACGT
CGAGAAGAGGTTCAAACAGTATGCACTTGCTTATGATACCATCCCCAATGGACTTTGTGA
ATATATTTGTGCACAGCCCGCAATATCTGATGGGATTTCTGGAAAATTATATCAAAACAG
TAACGGACTCACCTGCGCAAACAGAAATTCATAACACCCTTCTGGAGCTCTATATTTCAA
ATGATTTGAGCTTCCCGTCTATCTCTCAAGAAAATGAATATGAGAATCACTATATCAAAG
AAATAAAAGGTAAAGAAACTGCTAATGTCTATAGGTCAGGAATAAAGGAAAAAACTGGTC
TTGGAAAAGAAGATCCTAAAGTAGCAAAGAATATTGTTGATAGGAGAAGGAAAGGGCTTG
CGTTACTCAAATCTGCTTGGACATCTGAGATGGAAGATCCTTTGTATGATGTTGATCTTG
CTCTCATTCTTTGTAACACTAATGCATTCAAAGATGGTTTGCTATTTCTATATGAGAAAC
TAAAACTTTACAAAGAGGTTATTAGTTGTTACAAGCAAGCACATGATCATCAAGGTTTAA
TTGCATGTTGCAAGAAGTTGGGGGACTCATCTCAAGGAGGGGATCCTTCTCTCTGGGGGG
ATCTATTGAAGTATTTTGGGGATCTTGGGGAAGATTGCTCTAAAGAAGTTAAAGAGGTCT
TGACCTACATTGAGAAAGAGGATGTTGTACCTCCCATCGTTGTGCTACAGACACTATCAA
AAAACCCATGCTTGACACTCTCAGTCGTCAAAGATTACATTGCTCGCAAGCTTGAACAAG
AATCAAAGCTAATTGAAGATGATAGAAAATCCATTGATAAGTATCAGGCAGAGACAGAGT
TGATGAAAAGGGAAATACAAGATCTCAAGACGAACGCGAAGGTTTTCCAACTGAGCAAGT
GTAGCGCGTGCACTTTCACCCTTGATCTACCTGCTGTCCATTTCCTGTGCATGCACTCGT
TCCACCTTCGCTGCCTTGGTGACAACGAAAAAGAATGCCCAGAATGCGCGCCTGAATACA
GATCCGTCATGGAGGCAAAGCAGAAGCTAGAGCAAAACGCCAGGGACCATGATCTCTTTT
TCAGGCAGTTGAGGGGTTCCAAGGACGGCTTCTCTGTCATTGCAGACTATTTTAGCAAGG
GCATAGTGAGCAAGACAACCTTACCTCCTGAGAATGGACGGTAGTGAAGGACCACTGGTA
CTCCGTTGCCTTGTACGACATTATATGGTGTTATTTCCCTTTCATGCACCGGGTTATGCA
ATCTGGCCTGTTTCAGCCATGCAGTGAGGGTTTTTTTTTCTTTTTCTTTTTGGTTTGACA
TTGTAGATACTCATTTTCCGGCAGTTTCTTTCTGAACCCAAGTGCATTTGCTTTGACATT
GCTGTGCAGTTTTCCAGCATTGGGTTTCGATGTTTGGCTCGTGCCCTCCTACTTTTGAAA
GAAGTATTATATGAATCATGTTTTTTGTACGTTTCAGC