Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d025178_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:10:107851961:107857120:-1 gene:Zm00001d025178 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sterile alpha motif (SAM) domain-containing protein
Sequence

ATGTACTCGGACCAGATCTCCACCGGGCGCAAGCGCTCCATCCACGACCGCCTTGACGGC
GACCTCCCCGCCGGCACGGGCGCCGGCGGCCGTGTTCGTCACACGGTGTCCAAGAGGCAA
CGGCAGATAGATGAAAAATGGAAGCATGATCTGTATCGGGAAGACGATGAACCAGCTTCA
AATCCGAAGGATTTGCGATTGAAGCTTCAGAGGCGAAGTTCACAACAAAGCTTTACCAGC
ACAAGGAGTTCTGGTGTGCGTGATTTACGTGAGAAGCTATCTGGTATAATGCACCCACAG
CCATCAAATGCTGATCCAAAGCCCAAGCCAAAGCCAGTATCAGAGGTTGTTAACATCTCA
AGGCGTCAAACTGCTGATGAAATGCCTGCACGTCAAAGCAAGAGAGCACCAAAACAGACT
TCATTGAAGAAGACATCTCAGCCAAAGGTTGAAAGTCCACTCAGCAGTTTCCTGAGTTCC
CTTGGGCTTGAGAAGTACTCGATTACCTTCCAGGCAGAGGAGGTTGACATGGCAGCCCTA
AGGCACATGACGGAGAGTGATCTGAAAGCTTTGGGCATTCCAATGGGTCCTCGGAAGAAG
ATTATCCTTGCCTTGGAGCCAAGAGCATAA

Peptide Sequence

PEP ID

Zm00001d025178_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:10:107851961:107857120:-1 gene:Zm00001d025178 transcript:Zm00001d025178_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sterile alpha motif (SAM) domain-containing protein
Sequence

MYSDQISTGRKRSIHDRLDGDLPAGTGAGGRVRHTVSKRQRQIDEKWKHDLYREDDEPAS
NPKDLRLKLQRRSSQQSFTSTRSSGVRDLREKLSGIMHPQPSNADPKPKPKPVSEVVNIS
RRQTADEMPARQSKRAPKQTSLKKTSQPKVESPLSSFLSSLGLEKYSITFQAEEVDMAAL
RHMTESDLKALGIPMGPRKKIILALEPRA

Transcript Sequence

Transcript ID

Zm00001d025178_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:107851961:107857120:-1 gene:Zm00001d025178 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sterile alpha motif (SAM) domain-containing protein
Sequence

CTCCAACGGAAAGATGTACTCGGACCAGATCTCCACCGGGCGCAAGCGCTCCATCCACGA
CCGCCTTGACGGCGACCTCCCCGCCGGCACGGGCGCCGGCGGCCGTGTTCGTCACACGGT
GTCCAAGAGGCAACGGCAGATAGATGAAAAATGGAAGCATGATCTGTATCGGGAAGACGA
TGAACCAGCTTCAAATCCGAAGGATTTGCGATTGAAGCTTCAGAGGCGAAGTTCACAACA
AAGCTTTACCAGCACAAGGAGTTCTGGTGTGCGTGATTTACGTGAGAAGCTATCTGGTAT
AATGCACCCACAGCCATCAAATGCTGATCCAAAGCCCAAGCCAAAGCCAGTATCAGAGGT
TGTTAACATCTCAAGGCGTCAAACTGCTGATGAAATGCCTGCACGTCAAAGCAAGAGAGC
ACCAAAACAGACTTCATTGAAGAAGACATCTCAGCCAAAGGTTGAAAGTCCACTCAGCAG
TTTCCTGAGTTCCCTTGGGCTTGAGAAGTACTCGATTACCTTCCAGGCAGAGGAGGTTGA
CATGGCAGCCCTAAGGCACATGACGGAGAGTGATCTGAAAGCTTTGGGCATTCCAATGGG
TCCTCGGAAGAAGATTATCCTTGCCTTGGAGCCAAGAGCATAAGGGAATGGCAAGTGTAG
GAAGGTGGGAGGGATTTGCTAGGCATGCTCATGTGCAAGTTCGATAAAACTCTGTAACCA
CATCTTGGAAAGGGTAACAACGACAATGGTTTGTGGGCTTCTTGTAACACGTATGCTGCC
CTGTTGAGCATGTTCAACGAAGTTTAGGATGTTAGAAGGCAGGCCACGCCGTGTATTGAT
GCAACTTCTATTTCTGTGTTGATTAAATGGTGCTGTATACATGTTGGGGGTCTTTGGGTT
GGTCTTAGAATGCTATATCCTATAACTAC