Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d025141_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:10:106320023:106321234:-1 gene:Zm00001d025141 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:bHLH-transcription factor 108 description:basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Sequence

ATGGACAAGTACTGGGAGGAGACGCAGCGCTACCTGGAGTACGAGGAGCTCAGCATCTAC
TTGGAGGCGCAGGAGGACGCCATGTCTTGCTACGACTCCAGCTCGCCGGACGGCTCCATC
TCCCACTCGTCGTCGTCGGCGGCGGCGTGCGGCAACAAGAACATCCTGATGGAGCGCGAC
CGCCGCCGCAAGCTCAACGACAAGCTCTACGCGCTCCGCAGCGTCGTGCCGAACATCACC
AAGATGGACAAGGCGTCGATCATCAAGGACGCCATCGAGTACATCCAGCAGCTGCAGGTG
GAGGAGCGGCGGGTGCTGCAGGAGCTGCGCGTGCTCGACGACGACACCGCCGCCGCCGCC
ACCGCGCAGGTGGAGTGCTGCGACGTCGACGGGGGCCTGCTGCGACGGGAAGCCGAGCGC
GCGAAGAAGATGAAGCGCGCGCAGTCCGTCGCCAGCGGCGCGCAGTCTGCTCCGCCTCCG
CCCCCGCCGCCGCACGTCGAGGTGCTGGAGCTGCGCGTGTCGGAGGTGGGCGACCACGTG
CTGGTGGTCAGCGTGACGTGCCGCAAGCGACGCGACGCCATGGCCAGGGTGTGCCGCGCC
ATCGAGGACCTCCGGCTCCGTGTCATCACTGCCAACGTCACCTCCGTCGCCGGCTGCCAC
GTGCACACCGTCTTCGTCGAGGTACGTCGCCGGTGGCATGGCATTTGGCATCACATGGGA
TCGGGATACTCTGTTTTTTTTTCTCCTTTTTTCATCCTTGACGATGGATATGACTGA

Peptide Sequence

PEP ID

Zm00001d025141_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:10:106320023:106321234:-1 gene:Zm00001d025141 transcript:Zm00001d025141_T004 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:bHLH-transcription factor 108 description:basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Sequence

MDKYWEETQRYLEYEELSIYLEAQEDAMSCYDSSSPDGSISHSSSSAAACGNKNILMERD
RRRKLNDKLYALRSVVPNITKMDKASIIKDAIEYIQQLQVEERRVLQELRVLDDDTAAAA
TAQVECCDVDGGLLRREAERAKKMKRAQSVASGAQSAPPPPPPPHVEVLELRVSEVGDHV
LVVSVTCRKRRDAMARVCRAIEDLRLRVITANVTSVAGCHVHTVFVEVRRRWHGIWHHMG
SGYSVFFSPFFILDDGYD

Transcript Sequence

Transcript ID

Zm00001d025141_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:106320023:106321234:-1 gene:Zm00001d025141 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:bHLH-transcription factor 108 description:basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Sequence

AAGCTCACTCAAGGACAAAAAAAAAAAAACAGAGCGCAGCATTGGAGGCGAGGAAGAGCT
GTCGGCCGGAGATGGACAAGTACTGGGAGGAGACGCAGCGCTACCTGGAGTACGAGGAGC
TCAGCATCTACTTGGAGGCGCAGGAGGACGCCATGTCTTGCTACGACTCCAGCTCGCCGG
ACGGCTCCATCTCCCACTCGTCGTCGTCGGCGGCGGCGTGCGGCAACAAGAACATCCTGA
TGGAGCGCGACCGCCGCCGCAAGCTCAACGACAAGCTCTACGCGCTCCGCAGCGTCGTGC
CGAACATCACCAAGATGGACAAGGCGTCGATCATCAAGGACGCCATCGAGTACATCCAGC
AGCTGCAGGTGGAGGAGCGGCGGGTGCTGCAGGAGCTGCGCGTGCTCGACGACGACACCG
CCGCCGCCGCCACCGCGCAGGTGGAGTGCTGCGACGTCGACGGGGGCCTGCTGCGACGGG
AAGCCGAGCGCGCGAAGAAGATGAAGCGCGCGCAGTCCGTCGCCAGCGGCGCGCAGTCTG
CTCCGCCTCCGCCCCCGCCGCCGCACGTCGAGGTGCTGGAGCTGCGCGTGTCGGAGGTGG
GCGACCACGTGCTGGTGGTCAGCGTGACGTGCCGCAAGCGACGCGACGCCATGGCCAGGG
TGTGCCGCGCCATCGAGGACCTCCGGCTCCGTGTCATCACTGCCAACGTCACCTCCGTCG
CCGGCTGCCACGTGCACACCGTCTTCGTCGAGGTACGTCGCCGGTGGCATGGCATTTGGC
ATCACATGGGATCGGGATACTCTGTTTTTTTTTCTCCTTTTTTCATCCTTGACGATGGAT
ATGACTGACATGACATGGGCGTCGTGCTGATGTCACGGGCCGGCCGAATACGTGTTGACA
CTGACGCTGACTTTTACCACGGCAACACCCACTGTTCACTACGCCTTTTCGTTTCCGGTT
TTCAGTGTGGAAATGGAAATCTGGATAGTCACGTGCTCG