Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d025126_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:10:105633063:105634956:1 gene:Zm00001d025126 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASP-like protein 7

Sequence

ATGTCTAAGACGGCGGGCGTCGGCAGACTCGGAGGAGCCGGGGCGGCGGACGCGGCGCAG
CAGCAGCAGCTGGCGGCGGGTGATGCTGCGGTGGCGCGGGCGGCGCGGCCCATCGAGACG
CTGCTGCGCGCGGCGCCGCTGGTGCTGTGCGTGGCCGCCATGACCCTCATGCTCCGTGAC
CAGCAGAGCAATGAGTACGGCACCGTCGCCTACTCCGACCTGGGGGGCTTCAAATACCTC
GTCTACGCCAACGGCCTGTGCGCCGCCTACTCGCTGGCGTCCGCGTTCTACACGGCCGTG
CCGAGGCCCGCCACCGTGTCGCGCTCCTGGGTCGTCTTCCTCCTCGACCAGGTGTTCACG
TACCTGATCCTGGCGGCAGGTGCTGCGGCGGCGGAGCTGCTGTACCTCGCCTACAACGGC
GACAAGGAGGTGACGTGGAGCGAGGCGTGTGGTGTTTTCGGCAGCTTCTGCCGCCAGGCG
CGCACATCCGTGGCCATCACCTTCGGCGCCGTGCTCTGTTTCATCCTCCTCTCCCTCCTC
TCCTCCTACCGCCTCTTCAGCGCCTACGAGGCGCCCCCGCCGTCGGCGCTCGGCAGCAAG
GGCGTCGAGATCGCCGCGTACCCACGCTGA

Peptide Sequence

PEP ID

Zm00001d025126_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:10:105633063:105634956:1 gene:Zm00001d025126 transcript:Zm00001d025126_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASP-like protein 7

Sequence

MSKTAGVGRLGGAGAADAAQQQQLAAGDAAVARAARPIETLLRAAPLVLCVAAMTLMLRD
QQSNEYGTVAYSDLGGFKYLVYANGLCAAYSLASAFYTAVPRPATVSRSWVVFLLDQVFT
YLILAAGAAAAELLYLAYNGDKEVTWSEACGVFGSFCRQARTSVAITFGAVLCFILLSLL
SSYRLFSAYEAPPPSALGSKGVEIAAYPR

Transcript Sequence

Transcript ID

Zm00001d025126_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:105633063:105634956:1 gene:Zm00001d025126 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASP-like protein 7

Sequence

AGTTCCCATCTCAGACTCAGGGAGAGACGAGAGAAGTGGACACCTCGCCTGCCTGGACTC
GTCTACTCTAGTATACAGAAAAAAGCAGAAGAGATACGGGGATGTCTAAGACGGCGGGCG
TCGGCAGACTCGGAGGAGCCGGGGCGGCGGACGCGGCGCAGCAGCAGCAGCTGGCGGCGG
GTGATGCTGCGGTGGCGCGGGCGGCGCGGCCCATCGAGACGCTGCTGCGCGCGGCGCCGC
TGGTGCTGTGCGTGGCCGCCATGACCCTCATGCTCCGTGACCAGCAGAGCAATGAGTACG
GCACCGTCGCCTACTCCGACCTGGGGGGCTTCAAATACCTCGTCTACGCCAACGGCCTGT
GCGCCGCCTACTCGCTGGCGTCCGCGTTCTACACGGCCGTGCCGAGGCCCGCCACCGTGT
CGCGCTCCTGGGTCGTCTTCCTCCTCGACCAGGTGTTCACGTACCTGATCCTGGCGGCAG
GTGCTGCGGCGGCGGAGCTGCTGTACCTCGCCTACAACGGCGACAAGGAGGTGACGTGGA
GCGAGGCGTGTGGTGTTTTCGGCAGCTTCTGCCGCCAGGCGCGCACATCCGTGGCCATCA
CCTTCGGCGCCGTGCTCTGTTTCATCCTCCTCTCCCTCCTCTCCTCCTACCGCCTCTTCA
GCGCCTACGAGGCGCCCCCGCCGTCGGCGCTCGGCAGCAAGGGCGTCGAGATCGCCGCGT
ACCCACGCTGAAGCCGCCGGCCATTCATCGGAGGCTCTGGAGGGCGATCAAGTAACGAAG
GGAGTAACGAAGGCTGAATTGTGCTTGACTGCATCGTTCTTGCGTGTACTGGGTGGATTG
ACCTTGAACTTCTTACTACAGCCGTAAATTCTGTGTATGTTTCGTTATGGCAACATCTTT
CTGTGGAAAGAATGTTTGTAACAAGCAGACGAGAAGTTGTGTGGGTAGGAAATTGTAGCA
AAATTGTTT