Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d025117_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:10:105056013:105060537:1 gene:Zm00001d025117 gene_biotype:protein_coding transcript_biotype:protein_coding description:Actin associated protein

Sequence

ATGGCCTCCACCCCGCACCCTCCGCCGCTCATCGGCAAGTCGGGAAACCTCACGGTGTTC
TTCACGCCATCGGCGGAGCACGAGAGCCCGGGGTCCGAGTTCTCTACGCCCCCGACGAGC
CCTCGCGCCGAGGACTCCCCTGAATCACCACCGGCGCAGACAGCCCCTCCGCCCGCGCCT
GTTTACTCAGTATCCACGCCGCAGCTTGTCAAGATGGTCTCCCCGCCGCTTCCCGCCGAG
AAGCTCTCCCGACCCTCGCTGGTCCAGGTACCGTCGCCGCCCGTCAAGTCGGTCTCAACG
CCGCTGCAGGCACCAAAGGTCTCTTCCTGCTCCTTGCCACCGGTCCAGGTGCCGCCATTG
CAGTTCGGGAAGGCTTCGGCAGGATCAGATGGATCGCTGCTTGCGTTCTTCTGGGACGCG
GTTGCACGCATGCAAGAAGCACACGCGAGCTTGGACGAGCACATCTCGAGATGGTTCGGG
CTGGACCAGTCCAAGTACCAGTGGGCGCTCAACGACTATTATGAGAGGACCGGGCAGGTT
ATCCCATACTTCAGTTTCTTGTGA

Peptide Sequence

PEP ID

Zm00001d025117_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:10:105056013:105060537:1 gene:Zm00001d025117 transcript:Zm00001d025117_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Actin associated protein

Sequence

MASTPHPPPLIGKSGNLTVFFTPSAEHESPGSEFSTPPTSPRAEDSPESPPAQTAPPPAP
VYSVSTPQLVKMVSPPLPAEKLSRPSLVQVPSPPVKSVSTPLQAPKVSSCSLPPVQVPPL
QFGKASAGSDGSLLAFFWDAVARMQEAHASLDEHISRWFGLDQSKYQWALNDYYERTGQV
IPYFSFL

Transcript Sequence

Transcript ID

Zm00001d025117_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:105056013:105060537:1 gene:Zm00001d025117 gene_biotype:protein_coding transcript_biotype:protein_coding description:Actin associated protein

Sequence

GTTGGATTGAAGAAAAATTCACGTCCGCAGCCACGCGTCAGCAAGCCAGTAGCAGCGTCA
CCGTGAAGCGCGGACATGCCTCCGATTCCTAGTAGCTTTTAACAAGAAGTAATATATTTC
AAAAAAAATTAAATTGTCGAAAAAGGAAAGGGACTTCAGAAAATGTTCACTCCCCTTCCT
CGGCATTGGCGTCACATTCGCAGCCGTCTCACTCCTCTCGCACAGCATCCGCTTCTCCTG
CCAAACCCTAGCACCTCCGTCCTCCGACCCCCTCAGCTCCGGCGATGGCCTCCACCCCGC
ACCCTCCGCCGCTCATCGGCAAGTCGGGAAACCTCACGGTGTTCTTCACGCCATCGGCGG
AGCACGAGAGCCCGGGGTCCGAGTTCTCTACGCCCCCGACGAGCCCTCGCGCCGAGGACT
CCCCTGAATCACCACCGGCGCAGACAGCCCCTCCGCCCGCGCCTGTTTACTCAGTATCCA
CGCCGCAGCTTGTCAAGATGGTCTCCCCGCCGCTTCCCGCCGAGAAGCTCTCCCGACCCT
CGCTGGTCCAGGTACCGTCGCCGCCCGTCAAGTCGGTCTCAACGCCGCTGCAGGCACCAA
AGGTCTCTTCCTGCTCCTTGCCACCGGTCCAGGTGCCGCCATTGCAGTTCGGGAAGGCTT
CGGCAGGATCAGATGGATCGCTGCTTGCGTTCTTCTGGGACGCGGTTGCACGCATGCAAG
AAGCACACGCGAGCTTGGACGAGCACATCTCGAGATGGTTCGGGCTGGACCAGTCCAAGT
ACCAGTGGGCGCTCAACGACTATTATGAGAGGACCGGGCAGGTTATCCCATACTTCAGTT
TCTTGTGAATGCATTCTTAAGTTCTTAACATAAAATAGCAAACGTGCTCACCGTTTCTTG
GATGTTTTTCTAAGGTAAAACATTCAATTCCTGCAAGGTTGGCACGTCATAGCTATATTT
ATTAAGGAGATAGATTTGAGCAACGTTGGCACTCGTTAGCAGCACAGTTGTAAAAATTCA
GAAAGCTTGAAAAAGTGGATTATTTCTAGTTTTTATGTGTGTAACTAAGCTGGTGCCGTG
TCAAGCTGCATATAGAATCCTTTTGGTTGCGTGAAGACTGAGTTCTCTTTTTCTGCACCC
GGAAGCTCTTGGTTGTAACAAATCCATATTTAGCACCTTTATTGTAGCTTCGTTGTGGAT
AAAGAAAAACCTTGCTGACCTTTTTTTTATTGTACCTTCATTTTCATTTTCGCATTGTTT
TTTCGAAACGGG