Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d025060_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:10:102183888:102201238:1 gene:Zm00001d025060 gene_biotype:protein_coding transcript_biotype:protein_coding description:tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
Sequence	ATGGCTGCGACCACGCCGGCCACCGACCCGCCGGATGCCTTGCTTGCAGTAACAGCTGAT GCTCCCACTCCTGCTCGTCCCACCCCGGCGGAGCTGGTAGCCCGCGCCGTCGCCCCCGTC AAGCCCGCCTTCCTCTGCCCGCCTCCCGTCCGTGAGGCACCCAAGGAGGAGGGTAAAGCC GCCGGCGGCGGGGCCGTCGTAAAGGTGGAGAAGAAGTCCAAGCGCCAGCTCAAGCGCGAG CGGCAGCAGGAACAAAAATCTACTTCTCACCTTTGTATCGAAGTAGGGAAAAGTGGAAAT GTGGACTCATGCAAATATGGTACTTCTTGTCATTTCAGCCATGACATAAATGCTTATTTG TCTCAGAAACCAGCTGACCTTGAAGGCACATGCCCATTTACTGCACTGGGACATTTGTGT CCATATGGACTAACTTGTCGATTCCTTAGTACACATAAGGATAACCTTGCTCCTCAAAAT CATCCAGAGGGAAATTGTGAGAGAAATCCTTTGAGCAAAGAAATTCAAAAGCTCTTATGG AAGAGCAAATATAAATTTCCCAAGGCCAGTGCCCAGATCAAACTTCTTGGTCTTAAGGAT GGAAACAAGAATAAAGCAGAAGCAGTAAATGATGATAATCCAGATGAAACATGTAACCTA AATGATAATTCAGGGGGAGAACCTTTAGTTGTTGACTCAGTTGAATCTGTGGAGCCAAGG GCATCAAAGAAATCAAAGGTTGAAGTTGATGAAACTCGGGATAATGAAATCAAAGGTCCT ACCACTGGTATTCATGACAATGAGGCTGAATCTGAAGTTAATTCAATCAGTGGAGTAAAA GTTTCCTCAAATAACCAAAGTTCCTGCAAAGTTGATCTGATCACGATACCTCATTTACGT GAAAAGAAAATTATAGATTTTCGAGAGAAGCTGTACCTTGCTCCCTTAACCACTGTTGGT AATCTTCCTTTTCGGAGGCTCTGTAAAACCTTGGGAGCTGATGTTACTTGTGGAGAAATG GCTATGTGCACAAATCTTTTGCAGGGGCAAGCTTCAGAGTGGGCTTTGCTGCGACGGCAT CCATCAGAGGATTTGTTTGGGGTGCAAATTTGTGGACCGTATCCAGATACTGTAGCACGA ACAGTTGAACTTGTGGATAACGAATGTTCAGTTGATTTCATAGACATAAATATGGGCTGC CCAATTGATATAGTTGTCAACAAGGGTGCTGGATCATCATTGCTCACAAAGCCTATGAGG ATTAGGAGTATTGTTCAAGCGGCATCAACTGTTACTGAAAAACCGTTAACTGTTAAGGTA AGGACAGCTTTCTTTGAGGGCAGGAATCGTGCTGATTCTTTAGTTTCAGATATCTACAAC TGGGGTGCTTCAGCTATAACAATACATGGTCGATCACGGCAACAACGCTACAGCAAACTT GCTGATTGGGACTATATCTACCAGTGTGCACAGAAGGCTCCTGACTATTTGCATGTTATT GGAAATGGCGATGTATTCTCCTTTACTGACTGGAACAAGCATGTTTCAGACTGCTCCAAA ATTTCCACTTGCATGATTGCTAGAGGTGCACTTATCAAGCCTTGGTTATTTACTGAGATA AAAGAACAAAGGCACTGGGATATCACATCTGGCGAGAGATTAAATATTCTTAAAGATTTT GTGCGTTTTGGTCTGGAACATTGGGGCTCCGATTTCAAAGGAGTTGAGACAACACGCCAT TTCCTCCTAGAATGGCTTAGTTACACCTGCCGCTACATTCCGGTGGGTCTGCTGGATGTG ATTCCACAACGATTGAACTGGAGGCCTCCAAGCTACTATGGGCGTGATGACCTCGAAACC CTGATGGTCTCAGATTCAGCAGCTGACTGGATAAGGATCTCAGAGATGTTGCTTGGCAAA GTTCCAGAAGGGTTTACCTTCGCACCGAAGCACAAGTCCAATGCCTATGACCGAGCAGAA AACGGTTAA

Peptide Sequence

PEP ID	Zm00001d025060_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:10:102183888:102201238:1 gene:Zm00001d025060 transcript:Zm00001d025060_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
Sequence	MAATTPATDPPDALLAVTADAPTPARPTPAELVARAVAPVKPAFLCPPPVREAPKEEGKA AGGGAVVKVEKKSKRQLKRERQQEQKSTSHLCIEVGKSGNVDSCKYGTSCHFSHDINAYL SQKPADLEGTCPFTALGHLCPYGLTCRFLSTHKDNLAPQNHPEGNCERNPLSKEIQKLLW KSKYKFPKASAQIKLLGLKDGNKNKAEAVNDDNPDETCNLNDNSGGEPLVVDSVESVEPR ASKKSKVEVDETRDNEIKGPTTGIHDNEAESEVNSISGVKVSSNNQSSCKVDLITIPHLR EKKIIDFREKLYLAPLTTVGNLPFRRLCKTLGADVTCGEMAMCTNLLQGQASEWALLRRH PSEDLFGVQICGPYPDTVARTVELVDNECSVDFIDINMGCPIDIVVNKGAGSSLLTKPMR IRSIVQAASTVTEKPLTVKVRTAFFEGRNRADSLVSDIYNWGASAITIHGRSRQQRYSKL ADWDYIYQCAQKAPDYLHVIGNGDVFSFTDWNKHVSDCSKISTCMIARGALIKPWLFTEI KEQRHWDITSGERLNILKDFVRFGLEHWGSDFKGVETTRHFLLEWLSYTCRYIPVGLLDV IPQRLNWRPPSYYGRDDLETLMVSDSAADWIRISEMLLGKVPEGFTFAPKHKSNAYDRAE NG

Transcript Sequence

Transcript ID	Zm00001d025060_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:10:102183888:102201238:1 gene:Zm00001d025060 gene_biotype:protein_coding transcript_biotype:protein_coding description:tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
Sequence	TACTCCCCTAGCCTGCCTCGGTGCGCCGCCGCCACACCTCCACCATGGCTGCGACCACGC CGGCCACCGACCCGCCGGATGCCTTGCTTGCAGTAACAGCTGATGCTCCCACTCCTGCTC GTCCCACCCCGGCGGAGCTGGTAGCCCGCGCCGTCGCCCCCGTCAAGCCCGCCTTCCTCT GCCCGCCTCCCGTCCGTGAGGCACCCAAGGAGGAGGGTAAAGCCGCCGGCGGCGGGGCCG TCGTAAAGGTGGAGAAGAAGTCCAAGCGCCAGCTCAAGCGCGAGCGGCAGCAGGAACAAA AATCTACTTCTCACCTTTGTATCGAAGTAGGGAAAAGTGGAAATGTGGACTCATGCAAAT ATGGTACTTCTTGTCATTTCAGCCATGACATAAATGCTTATTTGTCTCAGAAACCAGCTG ACCTTGAAGGCACATGCCCATTTACTGCACTGGGACATTTGTGTCCATATGGACTAACTT GTCGATTCCTTAGTACACATAAGGATAACCTTGCTCCTCAAAATCATCCAGAGGGAAATT GTGAGAGAAATCCTTTGAGCAAAGAAATTCAAAAGCTCTTATGGAAGAGCAAATATAAAT TTCCCAAGGCCAGTGCCCAGATCAAACTTCTTGGTCTTAAGGATGGAAACAAGAATAAAG CAGAAGCAGTAAATGATGATAATCCAGATGAAACATGTAACCTAAATGATAATTCAGGGG GAGAACCTTTAGTTGTTGACTCAGTTGAATCTGTGGAGCCAAGGGCATCAAAGAAATCAA AGGTTGAAGTTGATGAAACTCGGGATAATGAAATCAAAGGTCCTACCACTGGTATTCATG ACAATGAGGCTGAATCTGAAGTTAATTCAATCAGTGGAGTAAAAGTTTCCTCAAATAACC AAAGTTCCTGCAAAGTTGATCTGATCACGATACCTCATTTACGTGAAAAGAAAATTATAG ATTTTCGAGAGAAGCTGTACCTTGCTCCCTTAACCACTGTTGGTAATCTTCCTTTTCGGA GGCTCTGTAAAACCTTGGGAGCTGATGTTACTTGTGGAGAAATGGCTATGTGCACAAATC TTTTGCAGGGGCAAGCTTCAGAGTGGGCTTTGCTGCGACGGCATCCATCAGAGGATTTGT TTGGGGTGCAAATTTGTGGACCGTATCCAGATACTGTAGCACGAACAGTTGAACTTGTGG ATAACGAATGTTCAGTTGATTTCATAGACATAAATATGGGCTGCCCAATTGATATAGTTG TCAACAAGGGTGCTGGATCATCATTGCTCACAAAGCCTATGAGGATTAGGAGTATTGTTC AAGCGGCATCAACTGTTACTGAAAAACCGTTAACTGTTAAGGTAAGGACAGCTTTCTTTG AGGGCAGGAATCGTGCTGATTCTTTAGTTTCAGATATCTACAACTGGGGTGCTTCAGCTA TAACAATACATGGTCGATCACGGCAACAACGCTACAGCAAACTTGCTGATTGGGACTATA TCTACCAGTGTGCACAGAAGGCTCCTGACTATTTGCATGTTATTGGAAATGGCGATGTAT TCTCCTTTACTGACTGGAACAAGCATGTTTCAGACTGCTCCAAAATTTCCACTTGCATGA TTGCTAGAGGTGCACTTATCAAGCCTTGGTTATTTACTGAGATAAAAGAACAAAGGCACT GGGATATCACATCTGGCGAGAGATTAAATATTCTTAAAGATTTTGTGCGTTTTGGTCTGG AACATTGGGGCTCCGATTTCAAAGGAGTTGAGACAACACGCCATTTCCTCCTAGAATGGC TTAGTTACACCTGCCGCTACATTCCGGTGGGTCTGCTGGATGTGATTCCACAACGATTGA ACTGGAGGCCTCCAAGCTACTATGGGCGTGATGACCTCGAAACCCTGATGGTCTCAGATT CAGCAGCTGACTGGATAAGGATCTCAGAGATGTTGCTTGGCAAAGTTCCAGAAGGGTTTA CCTTCGCACCGAAGCACAAGTCCAATGCCTATGACCGAGCAGAAAACGGTTAAACCTTTG TTCCGTTGTTCGTCAGGGCAGGAACTCAGCAACACCAGTGGTGGGTTCTCTTGAGGATCA GAGACAACTACTGAGGTCCATGCTGCTTGAACCCATCATGTTGTGTAACATGATTTTATA TTTAGCCAAATGGTGATTGTACCAATAGTTTAAGTATAGACTATAGAGCACCTGATAATT GAATTGCTCAATTCTCCTCTATTCATGCTAGCTCTAGCATCTTACTTATCCATATACCTA TATTTAAACTTACTCTATGAACAATGCAGTTTACAGT