Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d025038_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:10:100990840:100991898:1 gene:Zm00001d025038 gene_biotype:protein_coding transcript_biotype:protein_coding description:Senescence-specific cysteine protease SAG12
Sequence	ATGGCTACTCACTACTCGTCGGCTTTCGTCCTCCTCTCCGTCGTCGCCTGGGCCTGCGCT CTCAGCGGCTCTCTGGCGGCGCGCGACCTGGCGGACCAGGACCAGGCCATGGTGGCCAGG CACGAAGAGTGGATGGCAAAGTACGACCGCGTCTACAGCGACGCCGCGGAGAAGGCGAGG CGGTTCGAGGTGTTCAAGGCCAACATGGCCCTCATCGAGTCCGTCAACGCCGGCAACCAC AAGTTCTGGCTGGAGGCGAACCGTTTCGCCGACCTCACCGACGACGAGTTCAGGGCCACC TGGACGGGTTACAGGCCCAAGACTGCGGCGGCCAGCAGCAAGGGACGGAGCCGGACGGCG ACGACAGGGTTCAAGTACGCCAACGTCAGCCTCGACGACGTTCCGGCGTCCGTGGACTGG AGGACCAAAGGCGCCGTCACGCCCATCAAGAACCAAGGTGAGTGCGGTTGCTGCTGGGCG TTCTCCGCGGTGGCGTCCATGGAGGGCGTCGTGAAGCTGAGCACGGGGAAGCTTGTCTCC CTCTCGGAGCAGGAGCTAGTGGACTGCGACGTGAACGGCATGGACCAGGGCTGCGAGGGC GGCGAGATGGACGACGCCTTCGACTTCATCGTGGGCAACGGCGGCCTCACCACCGAGAGC AGGTACCCGTACACCGCCTCCGACGGCACCTGCAACTCCAACGAGGCCTCCGGCGACGCG GCGTCCATCAAGGGCTACGAGGACGTGCCGGCCAACGACGAGGCCTCCCTGCGCAAGGCC GTCGCCAACCAGCCCGTGTCGGTCGCCGTCGACGGAGGGGACTCCCACTTCAGGTTCTAC AAGGGCGGCGTCCTGTCCGGCGCGTGCGGCACGGAGCTCGACCACGGGATCGCCGCCGTC GGGTATGGCGTCGCCAGCGACGGCACCAAGTATTGGGTCATGAAGAACTCGTGGGGCACC TCTTGGGGGGAGGCCGGGTACATCCGGATGGAGAGGGACATCGCCGACGAGGAGGGTCTG TGCGGCCTCGCCATGCAGCCCTCCTACCCGACAGCCTAG

Peptide Sequence

PEP ID	Zm00001d025038_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:10:100990840:100991898:1 gene:Zm00001d025038 transcript:Zm00001d025038_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Senescence-specific cysteine protease SAG12
Sequence	MATHYSSAFVLLSVVAWACALSGSLAARDLADQDQAMVARHEEWMAKYDRVYSDAAEKAR RFEVFKANMALIESVNAGNHKFWLEANRFADLTDDEFRATWTGYRPKTAAASSKGRSRTA TTGFKYANVSLDDVPASVDWRTKGAVTPIKNQGECGCCWAFSAVASMEGVVKLSTGKLVS LSEQELVDCDVNGMDQGCEGGEMDDAFDFIVGNGGLTTESRYPYTASDGTCNSNEASGDA ASIKGYEDVPANDEASLRKAVANQPVSVAVDGGDSHFRFYKGGVLSGACGTELDHGIAAV GYGVASDGTKYWVMKNSWGTSWGEAGYIRMERDIADEEGLCGLAMQPSYPTA

Transcript Sequence

Transcript ID	Zm00001d025038_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:10:100990840:100991898:1 gene:Zm00001d025038 gene_biotype:protein_coding transcript_biotype:protein_coding description:Senescence-specific cysteine protease SAG12
Sequence	ATGGCTACTCACTACTCGTCGGCTTTCGTCCTCCTCTCCGTCGTCGCCTGGGCCTGCGCT CTCAGCGGCTCTCTGGCGGCGCGCGACCTGGCGGACCAGGACCAGGCCATGGTGGCCAGG CACGAAGAGTGGATGGCAAAGTACGACCGCGTCTACAGCGACGCCGCGGAGAAGGCGAGG CGGTTCGAGGTGTTCAAGGCCAACATGGCCCTCATCGAGTCCGTCAACGCCGGCAACCAC AAGTTCTGGCTGGAGGCGAACCGTTTCGCCGACCTCACCGACGACGAGTTCAGGGCCACC TGGACGGGTTACAGGCCCAAGACTGCGGCGGCCAGCAGCAAGGGACGGAGCCGGACGGCG ACGACAGGGTTCAAGTACGCCAACGTCAGCCTCGACGACGTTCCGGCGTCCGTGGACTGG AGGACCAAAGGCGCCGTCACGCCCATCAAGAACCAAGGTGAGTGCGGTTGCTGCTGGGCG TTCTCCGCGGTGGCGTCCATGGAGGGCGTCGTGAAGCTGAGCACGGGGAAGCTTGTCTCC CTCTCGGAGCAGGAGCTAGTGGACTGCGACGTGAACGGCATGGACCAGGGCTGCGAGGGC GGCGAGATGGACGACGCCTTCGACTTCATCGTGGGCAACGGCGGCCTCACCACCGAGAGC AGGTACCCGTACACCGCCTCCGACGGCACCTGCAACTCCAACGAGGCCTCCGGCGACGCG GCGTCCATCAAGGGCTACGAGGACGTGCCGGCCAACGACGAGGCCTCCCTGCGCAAGGCC GTCGCCAACCAGCCCGTGTCGGTCGCCGTCGACGGAGGGGACTCCCACTTCAGGTTCTAC AAGGGCGGCGTCCTGTCCGGCGCGTGCGGCACGGAGCTCGACCACGGGATCGCCGCCGTC GGGTATGGCGTCGCCAGCGACGGCACCAAGTATTGGGTCATGAAGAACTCGTGGGGCACC TCTTGGGGGGAGGCCGGGTACATCCGGATGGAGAGGGACATCGCCGACGAGGAGGGTCTG TGCGGCCTCGCCATGCAGCCCTCCTACCCGACAGCCTAG