Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d024946_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:10:96325810:96327827:1 gene:Zm00001d024946 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:flavone synthase typeII1 description: flavone synthase typeII1
Sequence

ATGGAAGAGCAGCAGCCCCGCCCCCGCCCAAGCATCATGTTCGTCCTGTCGTCGCTCGCC
AAGAATAACCCAGAGTCCGTGCTGGCGCTCATCGCGGTGCTCACCGTCGTCGCCCTGCGC
CACTTGATCTCCTCATGGCGGCAGCAGGCCCGGCTGCCCCCGTCACCGACGAGCCTCCCG
GTGATCGGCCACCTGCACCTGCTCCGCCCGCCGGTGCACCGCACCTTCCAGGAGCTGGCG
TCCCGGATCGGTCCGCTGATGCACATCCGCCTCGGCTCCACGCACTGCGTGGTTGCCAGC
ACCCCGGAGGTGGCCAGCGAGCTCATCCGCGGCCACGAGGGCAGCATCTCGGAGCGGCCG
CTCACGGCGGTGGCCCGCCAGTTCGCGTACGACTCGGCCGGCTTCGCCTTCGCGCCCTAT
AACACGCACTGGCGCTTCATGAAGCGCCTCTGCATGTCGGAGCTGCTCGGCCCGCGCACT
GTCGAGCAGCTGCGCCCCGTCCGCCGCGCCGGCACCGTGTCCCTGCTCGCCGACCTGCTG
GCGTCGTCGGCGCGGGGGGAGACGGTGGACCTCACCCGCCATCTCATCCGCCTCTCCAAC
ACCTCCATCATCCGGATGGTGGCCAGCACCGTGCCCGGAAGCGTCACCGACGAGGCGCAG
GAGGTGGTCAAGGACGTGGCCGAGCTCGTGGGCGCCTTCAACGTCGACGACTACATCTCC
CTAGTCCGTGGCTGGGATCTCCAGGGCCTCCGCAGGAGAGCCGCTGGCGTCCACCGCCGC
TTCGACGCGCTGCTGGAGGACATCCTCAGGCACAAGGAGGAGGCGAGGGCGGCGCGAAGG
CTCGACCAAGACGACGACGGACGTGGCAGCAGCAAGCAGGACAAGAAGCAGGCCACGCAC
AGCAAGGACCTGCTCGACATCCTCATGGACAAGGCAGACGACCCGGCGGCGGAGATCAAG
CTCACCCGGGAAAACATCAAGGCTTTCATCATCGACGTGGTGACTGCTGGTTCAGACACG
TCGGCCGCCATGGTAGAGTGGATGCTGGCGGAGCTGATGAACCACCCGGAGACGCTGCGT
AAGGTGGCGGAGGAGATCGACGCGGTGGTCGGCGGCGACAGGATCGCCAGCGAAGCGGAC
CTGCCACAGCTGCCGTACCTGATGGCGGCGTACAAGGAGACGTTGCGTCTGCACCCGGCA
GCGCCCATCGCGCACCGACAGTCGAGCGAGGAGATGGTGGTGCGCGGCTTCACGGTGCCG
CCGCAGACGGCGGTGTTCATCAACGTGTGGGCCATCGGGCGCGACCCGGCGTACTGGGAG
GAGCCCCTAGCGTTCCGGCCGGAGCGGTTCATGCCCGGCGGCGCCGCCGAGAGCCTGGAG
CCCCGTGGGCAGCACTTTCAGTACATGCCCTTCGGCAGCGGCCGCCGGGGATGCCCCGGC
ATGGGCCTGGCGCTACAGTCCGTGCCGGCCGTGCTGGCGGCGCTCGTGCAGTGCTTCCAC
TGGGCCACCGTCGACGGCGACGGCGGGGTGAACAAGATCGACATGTCGGAGTCGGACGGG
CTGGTGTGCGCTCGCAAGAAGCCGCTTCTGCTCCGCCCCACGCCTCGCCTCACCCCCTTC
CCGGCCGTCGTCTAG

Peptide Sequence

PEP ID

Zm00001d024946_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:10:96325810:96327827:1 gene:Zm00001d024946 transcript:Zm00001d024946_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:flavone synthase typeII1 description: flavone synthase typeII1
Sequence

MEEQQPRPRPSIMFVLSSLAKNNPESVLALIAVLTVVALRHLISSWRQQARLPPSPTSLP
VIGHLHLLRPPVHRTFQELASRIGPLMHIRLGSTHCVVASTPEVASELIRGHEGSISERP
LTAVARQFAYDSAGFAFAPYNTHWRFMKRLCMSELLGPRTVEQLRPVRRAGTVSLLADLL
ASSARGETVDLTRHLIRLSNTSIIRMVASTVPGSVTDEAQEVVKDVAELVGAFNVDDYIS
LVRGWDLQGLRRRAAGVHRRFDALLEDILRHKEEARAARRLDQDDDGRGSSKQDKKQATH
SKDLLDILMDKADDPAAEIKLTRENIKAFIIDVVTAGSDTSAAMVEWMLAELMNHPETLR
KVAEEIDAVVGGDRIASEADLPQLPYLMAAYKETLRLHPAAPIAHRQSSEEMVVRGFTVP
PQTAVFINVWAIGRDPAYWEEPLAFRPERFMPGGAAESLEPRGQHFQYMPFGSGRRGCPG
MGLALQSVPAVLAALVQCFHWATVDGDGGVNKIDMSESDGLVCARKKPLLLRPTPRLTPF
PAVV

Transcript Sequence

Transcript ID

Zm00001d024946_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:96325810:96327827:1 gene:Zm00001d024946 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:flavone synthase typeII1 description: flavone synthase typeII1
Sequence

AAATAAGATCAGTTAGCTTGTCTTTATTTCTTCCTCCGATCACTGATTATACACACGCAC
TTGATGAGGTTAGATCGCTAGTTAAGCAAGAAATTAGAGGAGGAGAGAGGGGTAGCCATG
GAAGAGCAGCAGCCCCGCCCCCGCCCAAGCATCATGTTCGTCCTGTCGTCGCTCGCCAAG
AATAACCCAGAGTCCGTGCTGGCGCTCATCGCGGTGCTCACCGTCGTCGCCCTGCGCCAC
TTGATCTCCTCATGGCGGCAGCAGGCCCGGCTGCCCCCGTCACCGACGAGCCTCCCGGTG
ATCGGCCACCTGCACCTGCTCCGCCCGCCGGTGCACCGCACCTTCCAGGAGCTGGCGTCC
CGGATCGGTCCGCTGATGCACATCCGCCTCGGCTCCACGCACTGCGTGGTTGCCAGCACC
CCGGAGGTGGCCAGCGAGCTCATCCGCGGCCACGAGGGCAGCATCTCGGAGCGGCCGCTC
ACGGCGGTGGCCCGCCAGTTCGCGTACGACTCGGCCGGCTTCGCCTTCGCGCCCTATAAC
ACGCACTGGCGCTTCATGAAGCGCCTCTGCATGTCGGAGCTGCTCGGCCCGCGCACTGTC
GAGCAGCTGCGCCCCGTCCGCCGCGCCGGCACCGTGTCCCTGCTCGCCGACCTGCTGGCG
TCGTCGGCGCGGGGGGAGACGGTGGACCTCACCCGCCATCTCATCCGCCTCTCCAACACC
TCCATCATCCGGATGGTGGCCAGCACCGTGCCCGGAAGCGTCACCGACGAGGCGCAGGAG
GTGGTCAAGGACGTGGCCGAGCTCGTGGGCGCCTTCAACGTCGACGACTACATCTCCCTA
GTCCGTGGCTGGGATCTCCAGGGCCTCCGCAGGAGAGCCGCTGGCGTCCACCGCCGCTTC
GACGCGCTGCTGGAGGACATCCTCAGGCACAAGGAGGAGGCGAGGGCGGCGCGAAGGCTC
GACCAAGACGACGACGGACGTGGCAGCAGCAAGCAGGACAAGAAGCAGGCCACGCACAGC
AAGGACCTGCTCGACATCCTCATGGACAAGGCAGACGACCCGGCGGCGGAGATCAAGCTC
ACCCGGGAAAACATCAAGGCTTTCATCATCGACGTGGTGACTGCTGGTTCAGACACGTCG
GCCGCCATGGTAGAGTGGATGCTGGCGGAGCTGATGAACCACCCGGAGACGCTGCGTAAG
GTGGCGGAGGAGATCGACGCGGTGGTCGGCGGCGACAGGATCGCCAGCGAAGCGGACCTG
CCACAGCTGCCGTACCTGATGGCGGCGTACAAGGAGACGTTGCGTCTGCACCCGGCAGCG
CCCATCGCGCACCGACAGTCGAGCGAGGAGATGGTGGTGCGCGGCTTCACGGTGCCGCCG
CAGACGGCGGTGTTCATCAACGTGTGGGCCATCGGGCGCGACCCGGCGTACTGGGAGGAG
CCCCTAGCGTTCCGGCCGGAGCGGTTCATGCCCGGCGGCGCCGCCGAGAGCCTGGAGCCC
CGTGGGCAGCACTTTCAGTACATGCCCTTCGGCAGCGGCCGCCGGGGATGCCCCGGCATG
GGCCTGGCGCTACAGTCCGTGCCGGCCGTGCTGGCGGCGCTCGTGCAGTGCTTCCACTGG
GCCACCGTCGACGGCGACGGCGGGGTGAACAAGATCGACATGTCGGAGTCGGACGGGCTG
GTGTGCGCTCGCAAGAAGCCGCTTCTGCTCCGCCCCACGCCTCGCCTCACCCCCTTCCCG
GCCGTCGTCTAGCGTGTCTTCCATGGCAATACCGTCTATGTCTGTACCAACCTCTACCAG
TACCACCACGTACGTACGGATTCGAAGAATGTGGATACCATGCATTAATTATATGTATCA
CATTATTATATATATGATATGCAAGAGTAATATGCATGGCATTGTCTTGCATGCTCTTTG
TTAAG