Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d024937_T010
CDS Infomation

cds chromosome:B73_RefGen_v4:10:95807725:95810922:1 gene:Zm00001d024937 gene_biotype:protein_coding transcript_biotype:protein_coding description:OSJNBa0089E12.13 protein; protein
Sequence

ATGATGAGGAGCGAAGTAATTGAGGCTGGAAAGCTAGTGAACCTGTGGAATGAATGGGGG
CTACAGATCCTGGTCATTGCAAGCTTCGGGTTACAAGTATTCCTCCTCGTTTTCGGAGGA
GTCCGCCGTCATAGCAACTCCACTGCCCTGACGTTCTTCCTCTGGTCGGCATACCTACTG
GCCGATTCCACAGCGATATACACCCTGGGCCACCTATCTGTTGACAGTATGTCAGACGAG
CACCAGCTGGTGGCATTCTGGGCGCCGTTCCTATTGCTGCACCTCGGTGGCCCAGACAAC
ATCACAGCGTATGCACTCGAGGACAATGCGCTCTGGCTACGCCACCTGCAAACTCTCGCC
GTGCAGGTCCTAGGAGCTGCTTATGTGATATACGAGTACATCGCCAGCAGAGGGGCATTG
CTTTTTCTGGCCTCCTTGTCCATGTTCTTTGCCGGTCTTCTCAAGTATGGCGAGAGGATA
TGGGCTCTCAAGTGTGGCAACATCAGCAGCATCCGCAGCAGCATCAGCATCCGGAAGATC
AAGACTGACCCTTATCAGCTATTGACTTTGGGTACTAGCGAAGAGGATTTGCTGCTTGGA
GCCCACTCCCAGTTTGATATCTGCAAAGGTGTCTTCGCCGATATCATAATGCTACCAAAT
CCCTTAGTTCGTTCACAGCCTAAACCACGTTCCGTGATATCTTATCTGGGAGAGGATCTA
TACAAGTTGGTTGAGATGGAGCTGTCTCTGATGTATGACTTCCTGTACACTAAGGCAGCA
GTGATCCACACATGGTATGGCTTCTGCATCCATTTCATCTCGCTGTTTGGCACAGCCACC
ACATTCCTTTTGTTTCAGCTCAGTATCAGCAACAGTGGAAATCGGTACAGCAGAGTGGAT
GTGGCTATCAGTTATGTTTTACTGGTTGGGGCTTTGGTCTTGGAAATCATATCAGTGTGC
AGAGCTGTACTATCCACCTGGACATGTTCTTTGTTGCACCGCAGGGGCAGGGGATGGGAG
TGGTCTCTCCACATTGTCACTTCCCTTGGTCAGCGTGTCCATCCAGCAAGTAGGAGACTC
TGGTCGGGCTCCATTGGGCAGTACAACTTGTTCCACCTGTGCACCCGCAACACCAACGAG
ATAGGGAGCAGACTAGCAACGAAACTGGGGCTCGAGGACTGGTGGAACAAGATGCACTTC
TCCGGAACTTTCCCACACGCTAACTCGTCTTTGTCAATACAAGATATCAAGAAATTGGTT
CTGCAAGCACTGCGAAGCAAAGAGCAAGCACTGCAACACCAGGATACTGATTTGAACTCA
AGAGGCAGCTTTATACTGAAACGTATGGAGGCCTACAAAGACTTTGCTCGCTGGAGCGTC
AACATTGACTTCGACGAGAGCATCCTTGTTTGGCACATTGCAACCGAGGTGTTCATCAGG
AAATCCAAGGCCAGACATGCAAAAGAACTCCTTGAGGCTACTGAGGTACTATCCAACTAC
TTGATGTTCTTGCTGGTGGTAAAACCTAACATGCTACCAGGCGCTGCGCGGCATAACATA
CATCTCACCTCCTGCGAACAACTAGAAGGACACTGTCGAACGCGATTTGGTGATAAGGAC
AACCCAGTGGCGCCATCCCCTGTAAGCTGGAACCCGTACTATATTCTTAAGGAATTGTTC
CACCATGATGGTCCCAGTTGCTCCAGGATACCACGGAGGGAGAAGCTTGCAGAGGTGGCC
TGGAGTTTCTCCCAATTTGCACTGGGATCAGTAAAGGCACCAAATCCACATGGGGACTCC
ATCCGTGACAGTGCTAATATGTATGCAATCTTGCTCGCCAACGAGCTTCTGAGCATAGAG
TTGCAGTGGCAGGATCAGCGTGACACTTTGGAACTGATCCTGGGGGTGTGGGTGGAGATG
TCGTTGTATGCTGCGGATCATTGCAGCCAAGAGTCCCATGCCAGGCAGCTCAGTAATGGC
TGCGAATTCATTACCATCGTGTCGTTGCTGGCACACCACTTCAAGTACTACTCTGGGGCC
TTCAGGGGCGCCGACAACCTTGGAGAAGATAAACCCGCTAGTGAAAATAAACCCGTTACT
GTAAATAATCCCATGAGTGAAAATTGTGGGAACTTGGTTTAG

Peptide Sequence

PEP ID

Zm00001d024937_P010
PEP Infomation

pep chromosome:B73_RefGen_v4:10:95807725:95810922:1 gene:Zm00001d024937 transcript:Zm00001d024937_T010 gene_biotype:protein_coding transcript_biotype:protein_coding description:OSJNBa0089E12.13 protein; protein
Sequence

MMRSEVIEAGKLVNLWNEWGLQILVIASFGLQVFLLVFGGVRRHSNSTALTFFLWSAYLL
ADSTAIYTLGHLSVDSMSDEHQLVAFWAPFLLLHLGGPDNITAYALEDNALWLRHLQTLA
VQVLGAAYVIYEYIASRGALLFLASLSMFFAGLLKYGERIWALKCGNISSIRSSISIRKI
KTDPYQLLTLGTSEEDLLLGAHSQFDICKGVFADIIMLPNPLVRSQPKPRSVISYLGEDL
YKLVEMELSLMYDFLYTKAAVIHTWYGFCIHFISLFGTATTFLLFQLSISNSGNRYSRVD
VAISYVLLVGALVLEIISVCRAVLSTWTCSLLHRRGRGWEWSLHIVTSLGQRVHPASRRL
WSGSIGQYNLFHLCTRNTNEIGSRLATKLGLEDWWNKMHFSGTFPHANSSLSIQDIKKLV
LQALRSKEQALQHQDTDLNSRGSFILKRMEAYKDFARWSVNIDFDESILVWHIATEVFIR
KSKARHAKELLEATEVLSNYLMFLLVVKPNMLPGAARHNIHLTSCEQLEGHCRTRFGDKD
NPVAPSPVSWNPYYILKELFHHDGPSCSRIPRREKLAEVAWSFSQFALGSVKAPNPHGDS
IRDSANMYAILLANELLSIELQWQDQRDTLELILGVWVEMSLYAADHCSQESHARQLSNG
CEFITIVSLLAHHFKYYSGAFRGADNLGEDKPASENKPVTVNNPMSENCGNLV

Transcript Sequence

Transcript ID

Zm00001d024937_T010
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:95807725:95810922:1 gene:Zm00001d024937 gene_biotype:protein_coding transcript_biotype:protein_coding description:OSJNBa0089E12.13 protein; protein
Sequence

GCTTCCTAGACAAGCTCGCCTTCAGACATGATGAGGAGCGAAGTAATTGAGGCTGGAAAG
CTAGTGAACCTGTGGAATGAATGGGGGCTACAGATCCTGGTCATTGCAAGCTTCGGGTTA
CAAGTATTCCTCCTCGTTTTCGGAGGAGTCCGCCGTCATAGCAACTCCACTGCCCTGACG
TTCTTCCTCTGGTCGGCATACCTACTGGCCGATTCCACAGCGATATACACCCTGGGCCAC
CTATCTGTTGACAGTATGTCAGACGAGCACCAGCTGGTGGCATTCTGGGCGCCGTTCCTA
TTGCTGCACCTCGGTGGCCCAGACAACATCACAGCGTATGCACTCGAGGACAATGCGCTC
TGGCTACGCCACCTGCAAACTCTCGCCGTGCAGGTCCTAGGAGCTGCTTATGTGATATAC
GAGTACATCGCCAGCAGAGGGGCATTGCTTTTTCTGGCCTCCTTGTCCATGTTCTTTGCC
GGTCTTCTCAAGTATGGCGAGAGGATATGGGCTCTCAAGTGTGGCAACATCAGCAGCATC
CGCAGCAGCATCAGCATCCGGAAGATCAAGACTGACCCTTATCAGCTATTGACTTTGGGT
ACTAGCGAAGAGGATTTGCTGCTTGGAGCCCACTCCCAGTTTGATATCTGCAAAGGTGTC
TTCGCCGATATCATAATGCTACCAAATCCCTTAGTTCGTTCACAGCCTAAACCACGTTCC
GTGATATCTTATCTGGGAGAGGATCTATACAAGTTGGTTGAGATGGAGCTGTCTCTGATG
TATGACTTCCTGTACACTAAGGCAGCAGTGATCCACACATGGTATGGCTTCTGCATCCAT
TTCATCTCGCTGTTTGGCACAGCCACCACATTCCTTTTGTTTCAGCTCAGTATCAGCAAC
AGTGGAAATCGGTACAGCAGAGTGGATGTGGCTATCAGTTATGTTTTACTGGTTGGGGCT
TTGGTCTTGGAAATCATATCAGTGTGCAGAGCTGTACTATCCACCTGGACATGTTCTTTG
TTGCACCGCAGGGGCAGGGGATGGGAGTGGTCTCTCCACATTGTCACTTCCCTTGGTCAG
CGTGTCCATCCAGCAAGTAGGAGACTCTGGTCGGGCTCCATTGGGCAGTACAACTTGTTC
CACCTGTGCACCCGCAACACCAACGAGATAGGGAGCAGACTAGCAACGAAACTGGGGCTC
GAGGACTGGTGGAACAAGATGCACTTCTCCGGAACTTTCCCACACGCTAACTCGTCTTTG
TCAATACAAGATATCAAGAAATTGGTTCTGCAAGCACTGCGAAGCAAAGAGCAAGCACTG
CAACACCAGGATACTGATTTGAACTCAAGAGGCAGCTTTATACTGAAACGTATGGAGGCC
TACAAAGACTTTGCTCGCTGGAGCGTCAACATTGACTTCGACGAGAGCATCCTTGTTTGG
CACATTGCAACCGAGGTGTTCATCAGGAAATCCAAGGCCAGACATGCAAAAGAACTCCTT
GAGGCTACTGAGGTACTATCCAACTACTTGATGTTCTTGCTGGTGGTAAAACCTAACATG
CTACCAGGCGCTGCGCGGCATAACATACATCTCACCTCCTGCGAACAACTAGAAGGACAC
TGTCGAACGCGATTTGGTGATAAGGACAACCCAGTGGCGCCATCCCCTGTAAGCTGGAAC
CCGTACTATATTCTTAAGGAATTGTTCCACCATGATGGTCCCAGTTGCTCCAGGATACCA
CGGAGGGAGAAGCTTGCAGAGGTGGCCTGGAGTTTCTCCCAATTTGCACTGGGATCAGTA
AAGGCACCAAATCCACATGGGGACTCCATCCGTGACAGTGCTAATATGTATGCAATCTTG
CTCGCCAACGAGCTTCTGAGCATAGAGTTGCAGTGGCAGGATCAGCGTGACACTTTGGAA
CTGATCCTGGGGGTGTGGGTGGAGATGTCGTTGTATGCTGCGGATCATTGCAGCCAAGAG
TCCCATGCCAGGCAGCTCAGTAATGGCTGCGAATTCATTACCATCGTGTCGTTGCTGGCA
CACCACTTCAAGTACTACTCTGGGGCCTTCAGGGGCGCCGACAACCTTGGAGAAGATAAA
CCCGCTAGTGAAAATAAACCCGTTACTGTAAATAATCCCATGAGTGAAAATTGTGGGAAC
TTGGTTTAGATGAGTTCGCACAATTTTCATTTGAAATGACCTCTCTGTCAGTTCAGGGAA
AAACCTGAGGATTCATGACTCCAAACAAGAGTAAATATATTTATCTGTCGATGAACATAG
TAATTAAAGTGCTAGGATTCATCAATGTTAGCTTTGGACTCTACATTCAACAGTTTGTAA
GGTGAGTCTGACTGTGTGTGTGTGTGACAT