Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d024933_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:10:95587846:95593393:1 gene:Zm00001d024933 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rhomboid-like protein 19
Sequence

ATGATGGAGAGCCAGCCGCTGCAGGCCCCGACGGCCACGGCTCCGGCCCCCGGATCTGCG
GAGCCAGCCGGAGCTCCGCCGGCCGTCACCCCCGGCAAGGAGTTCACGCGCACCTGCAAG
GGCCTCGTCGTCGTGCTCATCGGAGGATACGTGCTGCTCCAGCTCCTCCCTTCGTCACTC
AACTACCTCGCCATCATCCCCTCCAAGACAATCCCCTATGTATGGACCGTCTTTACCGCT
GGTTACATCGAGCAAGTCCTCCCAGGGGCCATTGGCAGTTCTCTTGGTCTTCTCTTTTGT
GGAAAGGACATTGAACCAGCATGGGGCCGCAAGGAATTCTTGAAGTTCATTATTTTGATC
AACTCCATCTGTGGCATTCTTGCATTTTGCTTTGCTATTGGACTCTACTACGTCACTGGA
AAGGAGAGCTTCCTTGTCACACCACTTTCTGGTTTCCACGGTTGCCTTGCTGGCTTTCTT
GTGGCCCTGAAGCAACTCTTACCAAACCTTGAGCTTCCTATGTGCTTTTTCTGGAAAATA
AAGGCAAAGTGGATGCCATTCTTTGTTGTATGTTTCTCAAGTATCATGGCCTTCATCGTG
CCTGATTCCATTAACTTCCTGCCAACTTTGGTGTCCGGGATGTACGTTAGCTGGCTTTAC
CTGAGATACTTCCAAAGGAACCCACTGACTGGACTTAAGGGTGATCCCAGTGATGACTTT
TCCTTCCCCAGTTTATTCCCAGCTGCCATGAGACCAGTTACGGACCCTGTGGCCAACCTG
TTTGATAGGCTGTTGTGTGCAAGGTCCAGGCCTTTGGAAGTCGCCCTCCCGATATCAGAT
CCTACCAAGGCTTCAAGAAGAAGGGAGCGTGGCGAGAGGGTTCTTGAGGAAAGGTTGGCG
GCTGACAATGCTGGTGACACAGAGGCCTCGCCTCGTGGCCATGGCACCGCGGAAGACTGA

Peptide Sequence

PEP ID

Zm00001d024933_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:10:95587846:95593393:1 gene:Zm00001d024933 transcript:Zm00001d024933_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rhomboid-like protein 19
Sequence

MMESQPLQAPTATAPAPGSAEPAGAPPAVTPGKEFTRTCKGLVVVLIGGYVLLQLLPSSL
NYLAIIPSKTIPYVWTVFTAGYIEQVLPGAIGSSLGLLFCGKDIEPAWGRKEFLKFIILI
NSICGILAFCFAIGLYYVTGKESFLVTPLSGFHGCLAGFLVALKQLLPNLELPMCFFWKI
KAKWMPFFVVCFSSIMAFIVPDSINFLPTLVSGMYVSWLYLRYFQRNPLTGLKGDPSDDF
SFPSLFPAAMRPVTDPVANLFDRLLCARSRPLEVALPISDPTKASRRRERGERVLEERLA
ADNAGDTEASPRGHGTAED

Transcript Sequence

Transcript ID

Zm00001d024933_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:95587846:95593393:1 gene:Zm00001d024933 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rhomboid-like protein 19
Sequence

GGAGGGGCAGTGGAGTCTGGAGAGTAACCCAACAACCCCCTCCTCCCCTCCCCTTCTGTC
TTATTGCCACCTCTCCACGTCTCCACCAAACAAGGCAACAAGGGAGAAGTAGATCTGCAT
CTGCGAGAGGAGGCAGCGGGGGTGGTGATGATGGAGAGCCAGCCGCTGCAGGCCCCGACG
GCCACGGCTCCGGCCCCCGGATCTGCGGAGCCAGCCGGAGCTCCGCCGGCCGTCACCCCC
GGCAAGGAGTTCACGCGCACCTGCAAGGGCCTCGTCGTCGTGCTCATCGGAGGATACGTG
CTGCTCCAGCTCCTCCCTTCGTCACTCAACTACCTCGCCATCATCCCCTCCAAGACAATC
CCCTATGTATGGACCGTCTTTACCGCTGGTTACATCGAGCAAGTCCTCCCAGGGGCCATT
GGCAGTTCTCTTGGTCTTCTCTTTTGTGGAAAGGACATTGAACCAGCATGGGGCCGCAAG
GAATTCTTGAAGTTCATTATTTTGATCAACTCCATCTGTGGCATTCTTGCATTTTGCTTT
GCTATTGGACTCTACTACGTCACTGGAAAGGAGAGCTTCCTTGTCACACCACTTTCTGGT
TTCCACGGTTGCCTTGCTGGCTTTCTTGTGGCCCTGAAGCAACTCTTACCAAACCTTGAG
CTTCCTATGTGCTTTTTCTGGAAAATAAAGGCAAAGTGGATGCCATTCTTTGTTGTATGT
TTCTCAAGTATCATGGCCTTCATCGTGCCTGATTCCATTAACTTCCTGCCAACTTTGGTG
TCCGGGATGTACGTTAGCTGGCTTTACCTGAGATACTTCCAAAGGAACCCACTGACTGGA
CTTAAGGGTGATCCCAGTGATGACTTTTCCTTCCCCAGTTTATTCCCAGCTGCCATGAGA
CCAGTTACGGACCCTGTGGCCAACCTGTTTGATAGGCTGTTGTGTGCAAGGTCCAGGCCT
TTGGAAGTCGCCCTCCCGATATCAGATCCTACCAAGGCTTCAAGAAGAAGGGAGCGTGGC
GAGAGGGTTCTTGAGGAAAGGTTGGCGGCTGACAATGCTGGTGACACAGAGGCCTCGCCT
CGTGGCCATGGCACCGCGGAAGACTGAGAACTTTCTTGTGACCATCAGCTCCTCTTATAG
GAGCCATGGCTTTGCTCCCTCCAGCGTTTATAGCTCTGCACTTTTGTCTTCTGGAGATGG
AGCTATTCAGTTCACAGCGAACGAATAATACGATGTTCTTAGTTTCTCTTTTTTTCCGCT
TCTTTGTCTGCGAGGATTTATTGGTTAAATTGTGTACTAGTCAATTGTTATGGTACAGCG
AAAAAGAGAGAAGAGGGTGATGGCATTTGCAGCCGATTGTTTGGTACTGGTCAAAGTTCT
GTAGTAGTCATATACTCTGCTTAAAATATAGAAAGAAGAATGGCTTCGT