Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d024891_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:10:93137405:93143070:-1 gene:Zm00001d024891 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-glucosidase 17
Sequence

ATGGCTCCACTTCTCGCTACTGCCATGGCCATGAACCACGCTGGCCATCCAGGACCAAAT
CATGAGAGTTTCTCACGGCACCACCTATCTTGCTCACCACAAAACAGTAAGCCAAGGTGT
AATCTTAGCTTCAGGCCACGAGCCGAAAGGGTAAGCGGTCAGAATAATGGAAGCCAAGTG
CTGAGCGCAGCCGGGGATGTCCCTCAAAGAAGCATGTTCCCCCCTGACTTCATCTTTGGT
GCCTCCACTTCAGCATACCAAATTGAAGGTGGATGGAATGAAGATGGAAAGGGGCCAAGC
TCATGGGATTACTTCTGCCACAATTTTCCAGAGTGGATATTAGACAAGAGCAATGGGGAT
GTTGCAGCAGATTCGTACCATATGTACCCTGAGGATGTCAGATTGCTGAAGGAAATAGGG
ATGGACGCCTATAGGTTCTCCATCTCTTGGTCCAGAATACTGCCGAATGGGACGCTCGAA
GGGGGTATTAATCCAGATGGCATCAAGTACTACAAAAATCTCATCAATTTGTTGTTAGAG
AACGGAATAGAACCGTTTGTAACCCTTTTCCACTGGGACACACCTCAAGCACTGATGGAC
AAGTACGGCGGTTTTTTAGATAAGAGTATTGTAAAAGACTATACAGACTTCGCCAAGGTG
TGCTTTGACAACTTCGGTGACAAAGTAAAGAACTGGTTTACCTTTAATGAGCCCGAGACT
TTTTGTACCTTTTCGCACGGAACTGGACAATGCGCCCCAGGGCGGTGCTCCCCTGGGATA
ATCACTCCAACGGGATCCACAAGTTGTGCTAACCCAATTGGAAACTCGCTCACTGAGCCA
TACATTGTTGGCCACAACCTTCTCCGAGCCCACGCCGAGGTTGTTGATCTTTACAACAAG
CATTACAAGATAGATTACAAGGGTGAGAATGGACGCATAGGGATTGTATTTGACGTGATG
GGCCGTGTGCCATTCGAAAAATCGGCGTTTATTGATCAACAGGCCGAAGAAAGGTCCTGG
GACATCAACCTAGGATGGTTCTTGGAGCCGGTTGTCCGTGGAGACTATCCATTCTCCATG
AGGTCGTTGGTAAGGGACCGACTACCCTTCTTCACTAACGAGGAGCGAGAGAAGCTAGTG
GGCTCCTATGACATGCTGGGGTTAAACTACTACACCTCAAGGTTCTCCAAACACATCGAT
ATCACGCAACACAACACGCTAAGGCTCAACACTGACGATGCATATGCCAGTCAGGAAACG
AAAGGGCCTGATGGCGAGCCCATTGGTCCTCCGATGGGGAATTGGATCTACCTGTATCCT
CAAGGCCTAAAGGATCTCCTTAAGATCATGAAGGAGAAATACGGAAACCCACCCATGTAC
ATCACTGAGAACGGGATGGCTGAAGTTGACCTTGGCCATAACTTGAATGACCAGAAAAGA
ATAGATTACCTCCAGAGCCACTTGGCAGCTCTTCAGGACTCAGTGGAGTCGGGAGCAAAT
GTGAAGGGCTACTTCCTTTGGTCTCTGCTGGACAACTTCGAATGGTTCTGCGGCTACACC
CAACCTTACGGCATCGTCTATGTGGACCGCAACGATGGCTGCAAGCGCTACATGAAGCAG
TCAGCCAAGTGGTACAAAAGCTTCATCGCTGCGAATGATAAATGA

Peptide Sequence

PEP ID

Zm00001d024891_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:10:93137405:93143070:-1 gene:Zm00001d024891 transcript:Zm00001d024891_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-glucosidase 17
Sequence

MAPLLATAMAMNHAGHPGPNHESFSRHHLSCSPQNSKPRCNLSFRPRAERVSGQNNGSQV
LSAAGDVPQRSMFPPDFIFGASTSAYQIEGGWNEDGKGPSSWDYFCHNFPEWILDKSNGD
VAADSYHMYPEDVRLLKEIGMDAYRFSISWSRILPNGTLEGGINPDGIKYYKNLINLLLE
NGIEPFVTLFHWDTPQALMDKYGGFLDKSIVKDYTDFAKVCFDNFGDKVKNWFTFNEPET
FCTFSHGTGQCAPGRCSPGIITPTGSTSCANPIGNSLTEPYIVGHNLLRAHAEVVDLYNK
HYKIDYKGENGRIGIVFDVMGRVPFEKSAFIDQQAEERSWDINLGWFLEPVVRGDYPFSM
RSLVRDRLPFFTNEEREKLVGSYDMLGLNYYTSRFSKHIDITQHNTLRLNTDDAYASQET
KGPDGEPIGPPMGNWIYLYPQGLKDLLKIMKEKYGNPPMYITENGMAEVDLGHNLNDQKR
IDYLQSHLAALQDSVESGANVKGYFLWSLLDNFEWFCGYTQPYGIVYVDRNDGCKRYMKQ
SAKWYKSFIAANDK

Transcript Sequence

Transcript ID

Zm00001d024891_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:93137405:93143070:-1 gene:Zm00001d024891 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-glucosidase 17
Sequence

AGTGCTTAAGCAGCTTTAGCTTGCCAGCAAGAAGAAAATATGGCTCCACTTCTCGCTACT
GCCATGGCCATGAACCACGCTGGCCATCCAGGACCAAATCATGAGAGTTTCTCACGGCAC
CACCTATCTTGCTCACCACAAAACAGTAAGCCAAGGTGTAATCTTAGCTTCAGGCCACGA
GCCGAAAGGGTAAGCGGTCAGAATAATGGAAGCCAAGTGCTGAGCGCAGCCGGGGATGTC
CCTCAAAGAAGCATGTTCCCCCCTGACTTCATCTTTGGTGCCTCCACTTCAGCATACCAA
ATTGAAGGTGGATGGAATGAAGATGGAAAGGGGCCAAGCTCATGGGATTACTTCTGCCAC
AATTTTCCAGAGTGGATATTAGACAAGAGCAATGGGGATGTTGCAGCAGATTCGTACCAT
ATGTACCCTGAGGATGTCAGATTGCTGAAGGAAATAGGGATGGACGCCTATAGGTTCTCC
ATCTCTTGGTCCAGAATACTGCCGAATGGGACGCTCGAAGGGGGTATTAATCCAGATGGC
ATCAAGTACTACAAAAATCTCATCAATTTGTTGTTAGAGAACGGAATAGAACCGTTTGTA
ACCCTTTTCCACTGGGACACACCTCAAGCACTGATGGACAAGTACGGCGGTTTTTTAGAT
AAGAGTATTGTAAAAGACTATACAGACTTCGCCAAGGTGTGCTTTGACAACTTCGGTGAC
AAAGTAAAGAACTGGTTTACCTTTAATGAGCCCGAGACTTTTTGTACCTTTTCGCACGGA
ACTGGACAATGCGCCCCAGGGCGGTGCTCCCCTGGGATAATCACTCCAACGGGATCCACA
AGTTGTGCTAACCCAATTGGAAACTCGCTCACTGAGCCATACATTGTTGGCCACAACCTT
CTCCGAGCCCACGCCGAGGTTGTTGATCTTTACAACAAGCATTACAAGATAGATTACAAG
GGTGAGAATGGACGCATAGGGATTGTATTTGACGTGATGGGCCGTGTGCCATTCGAAAAA
TCGGCGTTTATTGATCAACAGGCCGAAGAAAGGTCCTGGGACATCAACCTAGGATGGTTC
TTGGAGCCGGTTGTCCGTGGAGACTATCCATTCTCCATGAGGTCGTTGGTAAGGGACCGA
CTACCCTTCTTCACTAACGAGGAGCGAGAGAAGCTAGTGGGCTCCTATGACATGCTGGGG
TTAAACTACTACACCTCAAGGTTCTCCAAACACATCGATATCACGCAACACAACACGCTA
AGGCTCAACACTGACGATGCATATGCCAGTCAGGAAACGAAAGGGCCTGATGGCGAGCCC
ATTGGTCCTCCGATGGGGAATTGGATCTACCTGTATCCTCAAGGCCTAAAGGATCTCCTT
AAGATCATGAAGGAGAAATACGGAAACCCACCCATGTACATCACTGAGAACGGGATGGCT
GAAGTTGACCTTGGCCATAACTTGAATGACCAGAAAAGAATAGATTACCTCCAGAGCCAC
TTGGCAGCTCTTCAGGACTCAGTGGAGTCGGGAGCAAATGTGAAGGGCTACTTCCTTTGG
TCTCTGCTGGACAACTTCGAATGGTTCTGCGGCTACACCCAACCTTACGGCATCGTCTAT
GTGGACCGCAACGATGGCTGCAAGCGCTACATGAAGCAGTCAGCCAAGTGGTACAAAAGC
TTCATCGCTGCGAATGATAAATGAAGTGCACCCATACGTATACTCACTACCAGAGGAGAG
GTAGTGGAGAGCACCATATGCATTGTTCCAGTCCAGGGTTACCGTACCTTATTATATATG
AAATAAATGAAGTGCTC