Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d024878_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:10:91887070:91894300:-1 gene:Zm00001d024878 gene_biotype:protein_coding transcript_biotype:protein_coding description:SCP1-like small phosphatase 5
Sequence

ATGGGAGAGAGCGTTTCCAGTCGCTGCGCTGCGCGTCATTCTCCTCCCCTCCTTCCACCC
GGCAAAAACCCCGCGTCGGCCACTCTCCGGAGGCGACTAGGGTTTCAGCCCCTGGGACAC
GCCGCCGGTCGTGGCACCTCCGCCACCGGATCCCGGTACCCGAGCTACGCCATCGCCGCC
CCGCCCCCGGTCACCGCCGGCGCCGACAAAGCCCGCCTCGTAGGGCGCCAGCGTGCTCGC
AAACACAACCTCCTCGCCGTCCTCGTCCACGCCTCGCCTTGCGCACTTGCTGATGAATCA
TCCCACCTGGACACCGTCGAGCCTGTCGCCATACGCGCTACTGTTGGCCTCACCGATCAC
CTGCAGCGGACCGACCTTGGCCTTCCTTTCACCGCCCACGAGCACGACCTCCTTGGTCGC
GCCCCGCTCCGCGGTGGCAAACAGGCACGTCGCCGCTCCCGCGCAACAGAGGGAGGTGGA
GGCCACGAGCAGCAGAAGGTCGCAGCTCGCAGAAGGCTGCAGGGGTGGGGGCGCAGTTGT
TTTGAGTTATACTTCATAATAACAATGCAAACACGAAAAAAGGGTGCTGCAAAAAATGCA
GTGGGGTATCATGCCAATCCTAAGACAAGTAGGCCATCCAGAAGGGCAACTCAATCTACA
GTTGCTGAAAAGAAAGTATCTGATCTCATCACGTCTTCTTCCAAGAAGCAGAGACCTGTT
GGTGTCACTTCCAAGAAGCATTCTAAAGGAGGAAGGAAGCTGCTAGTTTCATGTGATACA
ACTGATGCTGGAAATGATGCACCTCAGGTACCCCCTAGCGTCTTCCCTGATCTGCAGGCC
CAGCATTCTGATGGTGTTGCAGATGATCGTCCCAACGATTCCATATTCTCTCCAACATAC
CATCATCACAAGGAAGGTGGTGTGAATAACCTATCCAAAGGCTTAGAAGAACAAACAACA
CATGTTCATGGTAGTAAGGAAGCTAGCCTAAAATCTGGTTCAAACCTTGCATGCAACACT
CATGATGGGATAAATGACCACTCTGGCACACTAAAGTTGCAATCAGCTGGGCAAAGCACA
TTGCTTGAAGTGGATGAGTACAGTGAACTGGGAAACCTTTCCTCAGAAGTATCAGCAATA
TATCTTGCTATGCAGCAGTCTAAGTTGGAGTGCATTGATGAACAGAGTCAAGATTCTACC
TCAACAGAAGGTTATGGTGAAGCTGAGGAGACTGAAGAGTATGATGATTTTGACCCCTAC
TCCTTTATCAAAGATTTACCTGATTTATCTATGGTGGTCCCCAAGTTTCGTCCTGTTCTC
CTTCCAAAGCAGACCCGGAGTTGTCCTACGATGACTCTTGTACTTGATCTTGATGAGACA
CTTGTACATTCAACTCTTGAACACTGTGAGGATGCTGATTTCACATTTCCAGTTCATTTT
AACTTCAGAGAGCACACAATATATGTTCGATGCCGCCCCTATCTCAAGGAATTCTTGGAT
AGGGTTGCCAGCGTGTTTGAGACAATTATTTTCACTGCTAGTCAAAGCATTTATGCGGAG
CAACTTCTCAATGTTCTTGATCCCAAAAGAAAGTTGTTCCGTCATCGTGTTTATCGTGAA
TCTTGTGTCTATGTGGAGGGAAACTACATGAAGGATCTGACAGTACTTGGACGTGACTTA
ACTCGCGTAATGATTGTTGACAATTCTCCGCAGTTGGAACACGCTATGAATAAAGATGTA
TTGGTGTGGAATTCCTGCATGTCGTGGTTCATGGATTTAAATGTAAAGCCGCTTTCCTCG
TTGCAGGCCTTTGGGTTCCAGTTGGACAATGGCATTCCTATAGAAAGCTGGTTTGATGAT
CCCAATGACATGGAGCTGCTGAAATTGCTCCCGTTCTTAGAAAGCTTGGTCGGCGTTGAA
GATGTCAGGCCTTATATAGCAAGGAAGTTCAACCTAAGGGAGAAGGTAGCCACCGCATCT
TCTCTTACAATAGACATGCAGATGTGA

Peptide Sequence

PEP ID

Zm00001d024878_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:10:91887070:91894300:-1 gene:Zm00001d024878 transcript:Zm00001d024878_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:SCP1-like small phosphatase 5
Sequence

MGESVSSRCAARHSPPLLPPGKNPASATLRRRLGFQPLGHAAGRGTSATGSRYPSYAIAA
PPPVTAGADKARLVGRQRARKHNLLAVLVHASPCALADESSHLDTVEPVAIRATVGLTDH
LQRTDLGLPFTAHEHDLLGRAPLRGGKQARRRSRATEGGGGHEQQKVAARRRLQGWGRSC
FELYFIITMQTRKKGAAKNAVGYHANPKTSRPSRRATQSTVAEKKVSDLITSSSKKQRPV
GVTSKKHSKGGRKLLVSCDTTDAGNDAPQVPPSVFPDLQAQHSDGVADDRPNDSIFSPTY
HHHKEGGVNNLSKGLEEQTTHVHGSKEASLKSGSNLACNTHDGINDHSGTLKLQSAGQST
LLEVDEYSELGNLSSEVSAIYLAMQQSKLECIDEQSQDSTSTEGYGEAEETEEYDDFDPY
SFIKDLPDLSMVVPKFRPVLLPKQTRSCPTMTLVLDLDETLVHSTLEHCEDADFTFPVHF
NFREHTIYVRCRPYLKEFLDRVASVFETIIFTASQSIYAEQLLNVLDPKRKLFRHRVYRE
SCVYVEGNYMKDLTVLGRDLTRVMIVDNSPQLEHAMNKDVLVWNSCMSWFMDLNVKPLSS
LQAFGFQLDNGIPIESWFDDPNDMELLKLLPFLESLVGVEDVRPYIARKFNLREKVATAS
SLTIDMQM

Transcript Sequence

Transcript ID

Zm00001d024878_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:91887070:91894300:-1 gene:Zm00001d024878 gene_biotype:protein_coding transcript_biotype:protein_coding description:SCP1-like small phosphatase 5
Sequence

ATGGGAGAGAGCGTTTCCAGTCGCTGCGCTGCGCGTCATTCTCCTCCCCTCCTTCCACCC
GGCAAAAACCCCGCGTCGGCCACTCTCCGGAGGCGACTAGGGTTTCAGCCCCTGGGACAC
GCCGCCGGTCGTGGCACCTCCGCCACCGGATCCCGGTACCCGAGCTACGCCATCGCCGCC
CCGCCCCCGGTCACCGCCGGCGCCGACAAAGCCCGCCTCGTAGGGCGCCAGCGTGCTCGC
AAACACAACCTCCTCGCCGTCCTCGTCCACGCCTCGCCTTGCGCACTTGCTGATGAATCA
TCCCACCTGGACACCGTCGAGCCTGTCGCCATACGCGCTACTGTTGGCCTCACCGATCAC
CTGCAGCGGACCGACCTTGGCCTTCCTTTCACCGCCCACGAGCACGACCTCCTTGGTCGC
GCCCCGCTCCGCGGTGGCAAACAGGCACGTCGCCGCTCCCGCGCAACAGAGGGAGGTGGA
GGCCACGAGCAGCAGAAGGTCGCAGCTCGCAGAAGGCTGCAGGGGTGGGGGCGCAGTTGT
TTTGAGTTATACTTCATAATAACAATGCAAACACGAAAAAAGGGTGCTGCAAAAAATGCA
GTGGGGTATCATGCCAATCCTAAGACAAGTAGGCCATCCAGAAGGGCAACTCAATCTACA
GTTGCTGAAAAGAAAGTATCTGATCTCATCACGTCTTCTTCCAAGAAGCAGAGACCTGTT
GGTGTCACTTCCAAGAAGCATTCTAAAGGAGGAAGGAAGCTGCTAGTTTCATGTGATACA
ACTGATGCTGGAAATGATGCACCTCAGGTACCCCCTAGCGTCTTCCCTGATCTGCAGGCC
CAGCATTCTGATGGTGTTGCAGATGATCGTCCCAACGATTCCATATTCTCTCCAACATAC
CATCATCACAAGGAAGGTGGTGTGAATAACCTATCCAAAGGCTTAGAAGAACAAACAACA
CATGTTCATGGTAGTAAGGAAGCTAGCCTAAAATCTGGTTCAAACCTTGCATGCAACACT
CATGATGGGATAAATGACCACTCTGGCACACTAAAGTTGCAATCAGCTGGGCAAAGCACA
TTGCTTGAAGTGGATGAGTACAGTGAACTGGGAAACCTTTCCTCAGAAGTATCAGCAATA
TATCTTGCTATGCAGCAGTCTAAGTTGGAGTGCATTGATGAACAGAGTCAAGATTCTACC
TCAACAGAAGGTTATGGTGAAGCTGAGGAGACTGAAGAGTATGATGATTTTGACCCCTAC
TCCTTTATCAAAGATTTACCTGATTTATCTATGGTGGTCCCCAAGTTTCGTCCTGTTCTC
CTTCCAAAGCAGACCCGGAGTTGTCCTACGATGACTCTTGTACTTGATCTTGATGAGACA
CTTGTACATTCAACTCTTGAACACTGTGAGGATGCTGATTTCACATTTCCAGTTCATTTT
AACTTCAGAGAGCACACAATATATGTTCGATGCCGCCCCTATCTCAAGGAATTCTTGGAT
AGGGTTGCCAGCGTGTTTGAGACAATTATTTTCACTGCTAGTCAAAGCATTTATGCGGAG
CAACTTCTCAATGTTCTTGATCCCAAAAGAAAGTTGTTCCGTCATCGTGTTTATCGTGAA
TCTTGTGTCTATGTGGAGGGAAACTACATGAAGGATCTGACAGTACTTGGACGTGACTTA
ACTCGCGTAATGATTGTTGACAATTCTCCGCAGTTGGAACACGCTATGAATAAAGATGTA
TTGGTGTGGAATTCCTGCATGTCGTGGTTCATGGATTTAAATGTAAAGCCGCTTTCCTCG
TTGCAGGCCTTTGGGTTCCAGTTGGACAATGGCATTCCTATAGAAAGCTGGTTTGATGAT
CCCAATGACATGGAGCTGCTGAAATTGCTCCCGTTCTTAGAAAGCTTGGTCGGCGTTGAA
GATGTCAGGCCTTATATAGCAAGGAAGTTCAACCTAAGGGAGAAGGTAGCCACCGCATCT
TCTCTTACAATAGACATGCAGATGTGA