Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d024831_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:10:90131666:90133501:-1 gene:Zm00001d024831 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative pentatricopeptide repeat family protein
Sequence	ATGAGAGATGTGTGGTCCCCGCCCCTCAGCTACGCCCACCTCAGCGGCCTCCTCGCGCGC TGCGGCCGCGCTGGGGACCTCCGCCTCGGCACCTCGCTGCACGCCATCGTCGCCAAGAAC CCCAGCCACTTCCGCCTCTGCCCACGCCGTTCCTGCCTGCAGCACGTGGTCGTGGTATGG AACTCCCTCGTCGCCATGTACGGCCGCTGCGGCTGCCGCGGGGACGCCGTCAGGGTGTTC GACGAAATGGCCCTCCGGGACTCCGTGTCCTGGAACTCGCTCCTCTCCGCCTCCGCTTCG GCCACGGATGCGCTCGCGCTGCTCAGGCGGATGCTGAGCGCCGCGCCAGGCGCCGCCGCG TGCGACCACGCCACGCTGACCACCGTCCTGTCCGCGTGCGCGCGCGCTGGCGGGGGCACG GGCTCCGCGTCGCTCCCCGCGGTACACGGGCTGGCGGCGTCGTGCGGGCTCGACGCTGAG GTGTCCGTCGGGAACGCGCTGATCACCGCCTACTTCGAGTGCAGCTCCCCGGGCTCTGCG GAGCGTGTGTTCGACGGCATGGCGGACAGGAACGTCATCACGTGGACGGCGATGGTCTCC GGGATGGCTCGGGCAGAGCGATATAGCGAGAGCCTGTCTCTGTTCCGGCAGATGAGGCGC GCGGTGGACGCCAACAGGGCGTCGTACTCGAGTTCTTTGCTAGCATGTGCCGGATCACGC GCCGCCAGGGAAGGGCAGCAGATTCACGGGCTTGCCGTCAAGGCTGGGCTGGAGACTGAT CTCCATGTCGAGAGTGAGCTCATGGACATGTACTCCAAATGCGGGTTGATGGAGGATGCG CTGAGGGTGTTCCGCTCCGGCCAGGATCCTGACGAAGTTTCCTTGACGGTGATTCTTGCT GGGTTTGCTCAGAACGGACTGGAGGAGGAGGCGTTCAGGTTGTTCGCTGAGATGGTCGGG AAAGGAATCCGCGTCGACGCAAACATGGTTTCTGCAGTCCTGGGTGCCTTCGGTGCTTCG GCGCCGTTTGCTCTTGGGAAACAGATCCACGCGCTGGCCATCAAGAGATGCTTCGGAGGG AACACCTACGTCTGCAACGGCCTGATCAATATGTATTCCAAATGCGGCGAGCTACAGGAG TCTATCCGAGTGTTTGACGGAACGCCCAGCAAGAACACGGTCACGTGGAATTCCATCATC GCTGCGTATGCCCGGCACGGCCATGGTTGGGAGGTTTTTGGGCTGTTCGAGTCCATGGAA GCCGATGGCGTCAAGCCCACCGATGTCACGTTCCTGTCACTGCTCCACGGATGCAGCCAT GTCGGGTCACCCAGGAAGGGACTGGAGATACTGGACTCCATGCCATCGAAGTATGGAATC CATCCGAAGGTGGAGCACTACGCATGCGTGGTTGACATGCTTGGCCGAGCCAGCCAGCTG GATGACGCCAAGGCGTTCATAGAAGACGGACCGTTCAAGGACAGCGCTCTTCTGTGGCAG TCGCTGATGGGAGCTTGCAGCTTCCACAAGAACTCAGGAGTTGGTGAATGTGCGGCAGAG AAGTTGCTCCTCCTGGACCCTGACTGCACTGCCGCTTACGTCTTGCTCTCGAACGTGTAC TCGTCCGAGGGCAGATGGGACGACAGGGCCAGGATCATGAAGAGGATGAGAGCTAGGGGC TTGAGGAAGGACACTGGCAAGAGCTGGATTGAGCTGGAAAAGGAGGTCCGTTCTTTTGCC GCTGGGCCAACAAGGTCTCGCCCTGATGATGTGCTGGTGCAGTTGTCCGCAGTTGCCAGT GATCAAGAAGATGTAGTAGAGAGCAGTGCTTTGTGA

Peptide Sequence

PEP ID	Zm00001d024831_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:10:90131666:90133501:-1 gene:Zm00001d024831 transcript:Zm00001d024831_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative pentatricopeptide repeat family protein
Sequence	MRDVWSPPLSYAHLSGLLARCGRAGDLRLGTSLHAIVAKNPSHFRLCPRRSCLQHVVVVW NSLVAMYGRCGCRGDAVRVFDEMALRDSVSWNSLLSASASATDALALLRRMLSAAPGAAA CDHATLTTVLSACARAGGGTGSASLPAVHGLAASCGLDAEVSVGNALITAYFECSSPGSA ERVFDGMADRNVITWTAMVSGMARAERYSESLSLFRQMRRAVDANRASYSSSLLACAGSR AAREGQQIHGLAVKAGLETDLHVESELMDMYSKCGLMEDALRVFRSGQDPDEVSLTVILA GFAQNGLEEEAFRLFAEMVGKGIRVDANMVSAVLGAFGASAPFALGKQIHALAIKRCFGG NTYVCNGLINMYSKCGELQESIRVFDGTPSKNTVTWNSIIAAYARHGHGWEVFGLFESME ADGVKPTDVTFLSLLHGCSHVGSPRKGLEILDSMPSKYGIHPKVEHYACVVDMLGRASQL DDAKAFIEDGPFKDSALLWQSLMGACSFHKNSGVGECAAEKLLLLDPDCTAAYVLLSNVY SSEGRWDDRARIMKRMRARGLRKDTGKSWIELEKEVRSFAAGPTRSRPDDVLVQLSAVAS DQEDVVESSAL

Transcript Sequence

Transcript ID	Zm00001d024831_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:10:90131666:90133501:-1 gene:Zm00001d024831 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative pentatricopeptide repeat family protein
Sequence	ATGAGAGATGTGTGGTCCCCGCCCCTCAGCTACGCCCACCTCAGCGGCCTCCTCGCGCGC TGCGGCCGCGCTGGGGACCTCCGCCTCGGCACCTCGCTGCACGCCATCGTCGCCAAGAAC CCCAGCCACTTCCGCCTCTGCCCACGCCGTTCCTGCCTGCAGCACGTGGTCGTGGTATGG AACTCCCTCGTCGCCATGTACGGCCGCTGCGGCTGCCGCGGGGACGCCGTCAGGGTGTTC GACGAAATGGCCCTCCGGGACTCCGTGTCCTGGAACTCGCTCCTCTCCGCCTCCGCTTCG GCCACGGATGCGCTCGCGCTGCTCAGGCGGATGCTGAGCGCCGCGCCAGGCGCCGCCGCG TGCGACCACGCCACGCTGACCACCGTCCTGTCCGCGTGCGCGCGCGCTGGCGGGGGCACG GGCTCCGCGTCGCTCCCCGCGGTACACGGGCTGGCGGCGTCGTGCGGGCTCGACGCTGAG GTGTCCGTCGGGAACGCGCTGATCACCGCCTACTTCGAGTGCAGCTCCCCGGGCTCTGCG GAGCGTGTGTTCGACGGCATGGCGGACAGGAACGTCATCACGTGGACGGCGATGGTCTCC GGGATGGCTCGGGCAGAGCGATATAGCGAGAGCCTGTCTCTGTTCCGGCAGATGAGGCGC GCGGTGGACGCCAACAGGGCGTCGTACTCGAGTTCTTTGCTAGCATGTGCCGGATCACGC GCCGCCAGGGAAGGGCAGCAGATTCACGGGCTTGCCGTCAAGGCTGGGCTGGAGACTGAT CTCCATGTCGAGAGTGAGCTCATGGACATGTACTCCAAATGCGGGTTGATGGAGGATGCG CTGAGGGTGTTCCGCTCCGGCCAGGATCCTGACGAAGTTTCCTTGACGGTGATTCTTGCT GGGTTTGCTCAGAACGGACTGGAGGAGGAGGCGTTCAGGTTGTTCGCTGAGATGGTCGGG AAAGGAATCCGCGTCGACGCAAACATGGTTTCTGCAGTCCTGGGTGCCTTCGGTGCTTCG GCGCCGTTTGCTCTTGGGAAACAGATCCACGCGCTGGCCATCAAGAGATGCTTCGGAGGG AACACCTACGTCTGCAACGGCCTGATCAATATGTATTCCAAATGCGGCGAGCTACAGGAG TCTATCCGAGTGTTTGACGGAACGCCCAGCAAGAACACGGTCACGTGGAATTCCATCATC GCTGCGTATGCCCGGCACGGCCATGGTTGGGAGGTTTTTGGGCTGTTCGAGTCCATGGAA GCCGATGGCGTCAAGCCCACCGATGTCACGTTCCTGTCACTGCTCCACGGATGCAGCCAT GTCGGGTCACCCAGGAAGGGACTGGAGATACTGGACTCCATGCCATCGAAGTATGGAATC CATCCGAAGGTGGAGCACTACGCATGCGTGGTTGACATGCTTGGCCGAGCCAGCCAGCTG GATGACGCCAAGGCGTTCATAGAAGACGGACCGTTCAAGGACAGCGCTCTTCTGTGGCAG TCGCTGATGGGAGCTTGCAGCTTCCACAAGAACTCAGGAGTTGGTGAATGTGCGGCAGAG AAGTTGCTCCTCCTGGACCCTGACTGCACTGCCGCTTACGTCTTGCTCTCGAACGTGTAC TCGTCCGAGGGCAGATGGGACGACAGGGCCAGGATCATGAAGAGGATGAGAGCTAGGGGC TTGAGGAAGGACACTGGCAAGAGCTGGATTGAGCTGGAAAAGGAGGTCCGTTCTTTTGCC GCTGGGCCAACAAGGTCTCGCCCTGATGATGTGCTGGTGCAGTTGTCCGCAGTTGCCAGT GATCAAGAAGATGTAGTAGAGAGCAGTGCTTTGTGA