Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d024830_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:10:90117995:90129224:1 gene:Zm00001d024830 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protease Do-like 2 chloroplastic
Sequence	ATGGCGTGCGTCGCCGCGCTCTTCGCCTCCCCGGCGCTCCTCCCCTTCCCCTCCACCACC TCGTCCATGGCCTCCTGCTCGTGCCGCCTCCGCCCCGCCGTCGTCGCCCGCGCGCCGCGC CAGCAGCCGCGGGGCCGGCGCGCGCTCCGGCGCTTCGATGAGGTGGAAGGGGTGTCGAAG AAACGGCGCGGCATCGGAGGCGGTGGCGGCGTCGGCGCTGGCGGGTCGCAGCCGTCGTCC TCGCGCAGGGATAGGGGGCTTTCCGTCGATTTCAAGGAGCCGCAGGTTGCTGAGTTTGAT GATCTTGAAGAGGACAAATTCCTTAATGCTGTCGTCAAGGTCTATTGCACTCATATCGCA CCCGATTATGGTCTTCCTTGGCAGAAGCAAAGGCAACATTCAAGTAGTGGGAGTGCTTTT ATGATTGGGGATGGTAAACTCTTGACAAATGCGCATTGCGTTGAGCACGACACCCAGGTC AAAGTAAAGAGAAGGGGAGATGACAAAAAATATATTGCCAAGGTTTTAGCTAGGGGTGTT GAATGCGATCTTGCGTTGCTATCTGTTGAGAATGAAGAGTTCTGGAGAGGAACAGAGGCA CTTCATTTTGGTCGTTTGCCATGCCTTCAGGATTCAGTAACTGTTGTGGGATATCCTCTT GGTGGAGACACTATATCTGTAACAAAAGGCGTTGTGTCGCGCATTGAGGTCACTCCATAT GCACATGGAACATCAGATCTTCTTGGCATTCAAATTGACGCAGCCATAAATCCTGGAAAC AGTGGGGGACCAGCCTTTAATGATCAAGGGGAGTGCATTGGTGTGGCATTTCAGGTGTAC AGGTCAGATGAAGCTGAAAATATTGGATATGTTATTCCAACTACAGTTGTATCCCATTTC TTAAATGACTATCAGAAAAATGGAAAGTACACAGGATTTCCATGTTTGGGTGTCTTACTT CAGAAATTGGAAAATCCGGCATTGCGTGAAAGCTTAAAAGTACCTTCAAGCGAGGGTGTT CTTGTTCGTCGGGTGGAACCTACTGCTCCAGCAAGCAGTGTTTTGCGAAAGGGAGATGTA ATTGTTAGCTTTGATGGTATCGCAGTAGGATGTGAAGCAACAGTACCATTTCGGTCCACA GAACGGATTGCTTTCCGCTATCTCACAAGCCAAAAGTATGCAGGCGATATTGCCCAGCTA GGAATCATTCGTGATGGCAATTCCATGAAAGTCCAGACTATTTTGCAGCCAAGAAAACAT TTAGTGCCGTTTCATGTTGAGGGGGGACAACCTTCTTATCTGATTGTTGCTGGCCTTGTC TTCACACCTTTAACAGAACCATTTATAGAGGAGGAATGCGAAGATACACTAGGGCTGAAA TTGTTAGCAAAAGCACGTTACTCTCTAGCAACCTTTGAGGGGGAGGAAATTGTTATTGTG TCGCAGGTTTTGGCGCACGAGGTCAACATTGGGTATGAGCACATGGGCAATCAACAAGTC ATGAAACTAAACGGAACCACAATAAAGAATATCCATCACCTTGCTCATCTTGTGGACACC TGTAAAGACAAGTTCCTGACGTTCGAATTCGAAGACGACTTCCTTGTTGTTTTGCATCGA GAAGAAGCGGATGCTGCATCATCGGACATTCTCAAGGAACATGCCATACCGTCCATACGG TCATCTGATCTATCAGAACCATATGCAGAAGCAAACAATAACGAGATACAGAAAACAAGC GAGGATTTTGGTGAAAGTCCTGTCACAAACTTTGAGATGGGGATCGATTGTCTCTTGTGG GCATGA

Peptide Sequence

PEP ID	Zm00001d024830_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:10:90117995:90129224:1 gene:Zm00001d024830 transcript:Zm00001d024830_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protease Do-like 2 chloroplastic
Sequence	MACVAALFASPALLPFPSTTSSMASCSCRLRPAVVARAPRQQPRGRRALRRFDEVEGVSK KRRGIGGGGGVGAGGSQPSSSRRDRGLSVDFKEPQVAEFDDLEEDKFLNAVVKVYCTHIA PDYGLPWQKQRQHSSSGSAFMIGDGKLLTNAHCVEHDTQVKVKRRGDDKKYIAKVLARGV ECDLALLSVENEEFWRGTEALHFGRLPCLQDSVTVVGYPLGGDTISVTKGVVSRIEVTPY AHGTSDLLGIQIDAAINPGNSGGPAFNDQGECIGVAFQVYRSDEAENIGYVIPTTVVSHF LNDYQKNGKYTGFPCLGVLLQKLENPALRESLKVPSSEGVLVRRVEPTAPASSVLRKGDV IVSFDGIAVGCEATVPFRSTERIAFRYLTSQKYAGDIAQLGIIRDGNSMKVQTILQPRKH LVPFHVEGGQPSYLIVAGLVFTPLTEPFIEEECEDTLGLKLLAKARYSLATFEGEEIVIV SQVLAHEVNIGYEHMGNQQVMKLNGTTIKNIHHLAHLVDTCKDKFLTFEFEDDFLVVLHR EEADAASSDILKEHAIPSIRSSDLSEPYAEANNNEIQKTSEDFGESPVTNFEMGIDCLLW A

Transcript Sequence

Transcript ID	Zm00001d024830_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:10:90117995:90129224:1 gene:Zm00001d024830 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protease Do-like 2 chloroplastic
Sequence	CACAGCTAGGGGAGGGAAACAAACACCCAAATCAAACCCGCGCGTCGCCAGCCGCAGCAC CAATGGCGTGCGTCGCCGCGCTCTTCGCCTCCCCGGCGCTCCTCCCCTTCCCCTCCACCA CCTCGTCCATGGCCTCCTGCTCGTGCCGCCTCCGCCCCGCCGTCGTCGCCCGCGCGCCGC GCCAGCAGCCGCGGGGCCGGCGCGCGCTCCGGCGCTTCGATGAGGTGGAAGGGGTGTCGA AGAAACGGCGCGGCATCGGAGGCGGTGGCGGCGTCGGCGCTGGCGGGTCGCAGCCGTCGT CCTCGCGCAGGGATAGGGGGCTTTCCGTCGATTTCAAGGAGCCGCAGGTTGCTGAGTTTG ATGATCTTGAAGAGGACAAATTCCTTAATGCTGTCGTCAAGGTCTATTGCACTCATATCG CACCCGATTATGGTCTTCCTTGGCAGAAGCAAAGGCAACATTCAAGTAGTGGGAGTGCTT TTATGATTGGGGATGGTAAACTCTTGACAAATGCGCATTGCGTTGAGCACGACACCCAGG TCAAAGTAAAGAGAAGGGGAGATGACAAAAAATATATTGCCAAGGTTTTAGCTAGGGGTG TTGAATGCGATCTTGCGTTGCTATCTGTTGAGAATGAAGAGTTCTGGAGAGGAACAGAGG CACTTCATTTTGGTCGTTTGCCATGCCTTCAGGATTCAGTAACTGTTGTGGGATATCCTC TTGGTGGAGACACTATATCTGTAACAAAAGGCGTTGTGTCGCGCATTGAGGTCACTCCAT ATGCACATGGAACATCAGATCTTCTTGGCATTCAAATTGACGCAGCCATAAATCCTGGAA ACAGTGGGGGACCAGCCTTTAATGATCAAGGGGAGTGCATTGGTGTGGCATTTCAGGTGT ACAGGTCAGATGAAGCTGAAAATATTGGATATGTTATTCCAACTACAGTTGTATCCCATT TCTTAAATGACTATCAGAAAAATGGAAAGTACACAGGATTTCCATGTTTGGGTGTCTTAC TTCAGAAATTGGAAAATCCGGCATTGCGTGAAAGCTTAAAAGTACCTTCAAGCGAGGGTG TTCTTGTTCGTCGGGTGGAACCTACTGCTCCAGCAAGCAGTGTTTTGCGAAAGGGAGATG TAATTGTTAGCTTTGATGGTATCGCAGTAGGATGTGAAGCAACAGTACCATTTCGGTCCA CAGAACGGATTGCTTTCCGCTATCTCACAAGCCAAAAGTATGCAGGCGATATTGCCCAGC TAGGAATCATTCGTGATGGCAATTCCATGAAAGTCCAGACTATTTTGCAGCCAAGAAAAC ATTTAGTGCCGTTTCATGTTGAGGGGGGACAACCTTCTTATCTGATTGTTGCTGGCCTTG TCTTCACACCTTTAACAGAACCATTTATAGAGGAGGAATGCGAAGATACACTAGGGCTGA AATTGTTAGCAAAAGCACGTTACTCTCTAGCAACCTTTGAGGGGGAGGAAATTGTTATTG TGTCGCAGGTTTTGGCGCACGAGGTCAACATTGGGTATGAGCACATGGGCAATCAACAAG TCATGAAACTAAACGGAACCACAATAAAGAATATCCATCACCTTGCTCATCTTGTGGACA CCTGTAAAGACAAGTTCCTGACGTTCGAATTCGAAGACGACTTCCTTGTTGTTTTGCATC GAGAAGAAGCGGATGCTGCATCATCGGACATTCTCAAGGAACATGCCATACCGTCCATAC GGTCATCTGATCTATCAGAACCATATGCAGAAGCAAACAATAACGAGATACAGAAAACAA GCGAGGATTTTGGTGAAAGTCCTGTCACAAACTTTGAGATGGGGATCGATTGTCTCTTGT GGGCATGATCGTTCTCTTTTAATGGATGAGCTACTGAGGATGAAGTTTCAGCTAAATCTG CAGTAGTGAAATGCAAGCATCTGCCGGCGAACAACGGTGGTCGTAGGAATACTCTCCCAA TGTGTAGTGCATGCAATGCAAGTACCTTGCGGCAAAGCCGAGTCATGTTGTATGTTAGCA TAGACAGAATTGAGAGATATGCTGTACGCTAGGAGCCATAGGATGATTTGTTCATTTTCA ATCTTTAGGCAGTCAGGAATTTAAGGGATTGTACAATTTGTCCACCAGCGATCCTGTAAA GCTCGGACATGCAAATATGCAATAGACCGTCCAGAAATTTTGTTGGTTTATGTTTGTGCT GTATTTCTCTCGTACTGGTATTCCAGAACAAAGAATCTGTAGGATGCCAGATTCTTGGAT ACAAAATGAGGTAATTGAAATCAATCAACATGGATCCCACAAAGTGCGGTCGTGATGTTG TGAGGTCCAAAAGGCTATAAATCATGTTCAGCGTTTC