Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d024767_T007
CDS Infomation

cds chromosome:B73_RefGen_v4:10:87219369:87221046:1 gene:Zm00001d024767 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aspartic proteinase A1
Sequence

ATGCAGGAGCAGGAGCTGCTGGCGGAGGACGTCTTCTCCTTCTGGCTGAACCGGAGCCCG
GACGCGGCGGCGGCCGGCGGCGAGCTCGTCTTCGGCGGCGTCGACCCTGCGCACTTCAGC
GGGAACCACACCTACGTCCCCGTCTCCCGCAAGGGATACTGGCAGTTCGACATGGGGGAC
CTTCTCATCGACGGCCACTCCACCGGTTTCTGCGCCAAGGGGTGCGCTGCCATCGTCGAC
TCCGGGACTTCCTTGCTCGCTGGCCCAACGGCCATAATTGCCCAGGTGAACGAAGCGATC
GGGGCAGACGGGATCATCAGCACGGAGTGCAAGGAAGTTGTGAGCCAGTACGGAGAGATG
ATCCTCGACATGCTCATCGCACAGACGGATCCACAGAGGGTGTGCAGCCAGGTTGGTCTG
TGCGTGTTCGATGGCGCTCGATCTGTCAGCGAGGGGATTGAATCTGTCGTCGGGAAAGAA
AACCTGGGCTCAGATGTCATGTGCTCGGCCTGTCAGATGGCTGTCGTGTGGATAGAGAAC
CAGCTCCGCGAAAACAAGACCAAGGAGCTCATACTGCAGTACGCTAACCAGCTGTGTGAG
CGTCTGCCGAGCCCCAACGGAGAGTCAACAGTCAGCTGCCAGGAGATCTCCAAGATGCCC
AGCCTTGCGTTCACCATCGCAAACAAGACCTTCACCCTAACACCCCAGCAGTACATTGTG
AAGCTGGAGCAAGGAGGCCAAACCGTCTGCATCAGTGGGTTCATGGCGTATGACGTGCCA
CCGCCGCGTGGTCCTCTCTGGATTCTTGGGGACGTCTTCATGGGAGCTTACCACACGGTG
TTCGACTTCGGCAACGACAGGATTGGCTTCGCGGAATCTGCATGA

Peptide Sequence

PEP ID

Zm00001d024767_P007
PEP Infomation

pep chromosome:B73_RefGen_v4:10:87219369:87221046:1 gene:Zm00001d024767 transcript:Zm00001d024767_T007 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aspartic proteinase A1
Sequence

MQEQELLAEDVFSFWLNRSPDAAAAGGELVFGGVDPAHFSGNHTYVPVSRKGYWQFDMGD
LLIDGHSTGFCAKGCAAIVDSGTSLLAGPTAIIAQVNEAIGADGIISTECKEVVSQYGEM
ILDMLIAQTDPQRVCSQVGLCVFDGARSVSEGIESVVGKENLGSDVMCSACQMAVVWIEN
QLRENKTKELILQYANQLCERLPSPNGESTVSCQEISKMPSLAFTIANKTFTLTPQQYIV
KLEQGGQTVCISGFMAYDVPPPRGPLWILGDVFMGAYHTVFDFGNDRIGFAESA

Transcript Sequence

Transcript ID

Zm00001d024767_T007
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:87219369:87221046:1 gene:Zm00001d024767 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aspartic proteinase A1
Sequence

CAGGCAGAGCATGCAGGAGCAGGAGCTGCTGGCGGAGGACGTCTTCTCCTTCTGGCTGAA
CCGGAGCCCGGACGCGGCGGCGGCCGGCGGCGAGCTCGTCTTCGGCGGCGTCGACCCTGC
GCACTTCAGCGGGAACCACACCTACGTCCCCGTCTCCCGCAAGGGATACTGGCAGTTCGA
CATGGGGGACCTTCTCATCGACGGCCACTCCACCGGTTTCTGCGCCAAGGGGTGCGCTGC
CATCGTCGACTCCGGGACTTCCTTGCTCGCTGGCCCAACGGCCATAATTGCCCAGGTGAA
CGAAGCGATCGGGGCAGACGGGATCATCAGCACGGAGTGCAAGGAAGTTGTGAGCCAGTA
CGGAGAGATGATCCTCGACATGCTCATCGCACAGACGGATCCACAGAGGGTGTGCAGCCA
GGTTGGTCTGTGCGTGTTCGATGGCGCTCGATCTGTCAGCGAGGGGATTGAATCTGTCGT
CGGGAAAGAAAACCTGGGCTCAGATGTCATGTGCTCGGCCTGTCAGATGGCTGTCGTGTG
GATAGAGAACCAGCTCCGCGAAAACAAGACCAAGGAGCTCATACTGCAGTACGCTAACCA
GCTGTGTGAGCGTCTGCCGAGCCCCAACGGAGAGTCAACAGTCAGCTGCCAGGAGATCTC
CAAGATGCCCAGCCTTGCGTTCACCATCGCAAACAAGACCTTCACCCTAACACCCCAGCA
GTACATTGTGAAGCTGGAGCAAGGAGGCCAAACCGTCTGCATCAGTGGGTTCATGGCGTA
TGACGTGCCACCGCCGCGTGGTCCTCTCTGGATTCTTGGGGACGTCTTCATGGGAGCTTA
CCACACGGTGTTCGACTTCGGCAACGACAGGATTGGCTTCGCGGAATCTGCATGAGTGTG
GAGAGCACTCTCATCTTTATAAAGACGATACCCTATGTATTAGGGATGTGTAGTTTACTG
TCTATCCACTACATGCCAACAGTACGCTGCAAATAAATCGGTGGCCAAAATTGCTGAAAC
CAGAAACGTGAACAGTACTGCT