Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d024755_T009
CDS Infomation

cds chromosome:B73_RefGen_v4:10:86466736:86468432:1 gene:Zm00001d024755 gene_biotype:protein_coding transcript_biotype:protein_coding description:PTI1-like tyrosine-protein kinase 3
Sequence

ATGTCGTGCTTTGCGTGCTGTGGTGATGAAGATACCCAAGTACCAGACACCAGGGCTCAA
TACCCAGGACACCATCCAGCGAGGGCCGATGCATACCGCCCTTCTGATCAACCTCCCAAG
GGTCCTCAGCCTGTGAAAATGCAACCAATCGCAGTCCCTGCTATTCCTGTGGATGAGATT
AGGGAGGTGACCAAGGGTTTTGGTGATGAAGCTTTGATTGGTGAGGGATCCTTTGGCAGA
GTATACTTGGGTGTTCTAAGAAATGGTAGGAGTGCCGCGGTCAAAAAGTTGGATTCTAAC
AAGCAGCCAGACCAAGAGTTCTTGGCCCAGGTGTCTATGGTGTCAAGGCTGAAGCATGAA
AATGTTGTCGAGTTGCTTGGTTACTGTGCTGATGGGACACTCCGCGTCCTTGCTTATGAG
TTCGCTACAATGGGTTCCCTTCATGATATGCTTCATGGAAGGAAAGGGGTTAAAGGGGCT
CAACCCGGTCCAGTCTTATCGTGGTCGCAACGTGTGAAGATAGCGGTTGGGGCAGCGAAA
GGCCTCGAGTATCTTCATGAGAAAGCGCAGCCCCATATCATACACCGAGACATCAAGTCT
AGCAACGTCCTTCTTTTCGATGACGATGTAGCTAAGATCGCTGACTTTGATCTGTCGAAC
CAAGCTCCTGACATGGCAGCTCGGCTTCACTCAACTAGGGTTCTCGGAACATTCGGATAC
CATGCGCCTGAGTATGCGATGACTGGGCAACTCAGCTCTAAGAGTGATGTATATAGTTTT
GGGGTTGTTCTTCTTGAGCTGTTGACTGGGAGGAAACCTGTCGACCATACATTGCCAAGG
GGACAGCAGAGTCTTGTGACCTGGGCTACACCAAGACTTAGCGAAGACAAGGTTAGACAG
TGTGTTGACTCAAGACTTGGAGGGGACTATCCTCCTAAAGCTGTTGCGAAGGTACCATCG
ACAACCTTTTCTTCTCGAACCATGCATGGCATTTTAAAGTTGATTCTATTAACTGTTTAA

Peptide Sequence

PEP ID

Zm00001d024755_P009
PEP Infomation

pep chromosome:B73_RefGen_v4:10:86466736:86468432:1 gene:Zm00001d024755 transcript:Zm00001d024755_T009 gene_biotype:protein_coding transcript_biotype:protein_coding description:PTI1-like tyrosine-protein kinase 3
Sequence

MSCFACCGDEDTQVPDTRAQYPGHHPARADAYRPSDQPPKGPQPVKMQPIAVPAIPVDEI
REVTKGFGDEALIGEGSFGRVYLGVLRNGRSAAVKKLDSNKQPDQEFLAQVSMVSRLKHE
NVVELLGYCADGTLRVLAYEFATMGSLHDMLHGRKGVKGAQPGPVLSWSQRVKIAVGAAK
GLEYLHEKAQPHIIHRDIKSSNVLLFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY
HAPEYAMTGQLSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPRLSEDKVRQ
CVDSRLGGDYPPKAVAKVPSTTFSSRTMHGILKLILLTV

Transcript Sequence

Transcript ID

Zm00001d024755_T009
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:86466736:86468432:1 gene:Zm00001d024755 gene_biotype:protein_coding transcript_biotype:protein_coding description:PTI1-like tyrosine-protein kinase 3
Sequence

AGCTTCAAGGTCTTGTCTTTGGGTAGAACATGTCGTGCTTTGCGTGCTGTGGTGATGAAG
ATACCCAAGTACCAGACACCAGGGCTCAATACCCAGGACACCATCCAGCGAGGGCCGATG
CATACCGCCCTTCTGATCAACCTCCCAAGGGTCCTCAGCCTGTGAAAATGCAACCAATCG
CAGTCCCTGCTATTCCTGTGGATGAGATTAGGGAGGTGACCAAGGGTTTTGGTGATGAAG
CTTTGATTGGTGAGGGATCCTTTGGCAGAGTATACTTGGGTGTTCTAAGAAATGGTAGGA
GTGCCGCGGTCAAAAAGTTGGATTCTAACAAGCAGCCAGACCAAGAGTTCTTGGCCCAGG
TGTCTATGGTGTCAAGGCTGAAGCATGAAAATGTTGTCGAGTTGCTTGGTTACTGTGCTG
ATGGGACACTCCGCGTCCTTGCTTATGAGTTCGCTACAATGGGTTCCCTTCATGATATGC
TTCATGGAAGGAAAGGGGTTAAAGGGGCTCAACCCGGTCCAGTCTTATCGTGGTCGCAAC
GTGTGAAGATAGCGGTTGGGGCAGCGAAAGGCCTCGAGTATCTTCATGAGAAAGCGCAGC
CCCATATCATACACCGAGACATCAAGTCTAGCAACGTCCTTCTTTTCGATGACGATGTAG
CTAAGATCGCTGACTTTGATCTGTCGAACCAAGCTCCTGACATGGCAGCTCGGCTTCACT
CAACTAGGGTTCTCGGAACATTCGGATACCATGCGCCTGAGTATGCGATGACTGGGCAAC
TCAGCTCTAAGAGTGATGTATATAGTTTTGGGGTTGTTCTTCTTGAGCTGTTGACTGGGA
GGAAACCTGTCGACCATACATTGCCAAGGGGACAGCAGAGTCTTGTGACCTGGGCTACAC
CAAGACTTAGCGAAGACAAGGTTAGACAGTGTGTTGACTCAAGACTTGGAGGGGACTATC
CTCCTAAAGCTGTTGCGAAGGTACCATCGACAACCTTTTCTTCTCGAACCATGCATGGCA
TTTTAAAGTTGATTCTATTAACTGTTTAACGAAGTGCTAAAGAAAGCTGGTTAATGAAGA
GCAAAAGGTGATGCATGTAGAGGAATAGATGAGTCAATCGCTTTCTGTTACTGATATCAT
GCTCCTAAATAAATACTCTACTACTGAACATTGTTCTCGAAGCGTATTTGCATTCAGTGT
CAGTTTATTACG