Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d024729_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:10:85508260:85512046:-1 gene:Zm00001d024729 gene_biotype:protein_coding transcript_biotype:protein_coding description:Shaggy-related protein kinase alpha
Sequence	ATGGCCTCGGTGGGCGTGGCACGCTCTTCTTTGGGATTTCAGAATGGCACAAGTTCTAGC AGTGACCCAGATCGTCTTCCCAACGAGTTGGGCAGTATGAGCATAAGGGACGACAAGGAC GTTGAAGATATTGTAGTCAATGGCAATGGGGCGGAGCCTGGTCATATCATAGTGACCAGC ATTGATGGGAGAAATGGGCAGGCAAAGCAGACCATTAGTTACATGGCTGAGCGGGTGGTA GGTCATGGGTCCTTCGGAACCGTTTTCCAGGCCAAGTGTCTTGAAACTGGTGAGACCGTA GCTATAAAAAAGGTTCTTCAAGACAAGAGATACAAGAATCGTGAGCTGCAAACCATGCGA GTGCTTGACCACCCAAATGTGGTGGCTCTAAAGCACTGTTTCTTCTCAAAGACTGAGAAA GAGGAGCTTTACCTCAATTTGGTGCTTGAGTATGTACCGGAGACTGCTCATCGTGTCATC AAACATTACAACAAGATGAACCAGCGCATGCCTTTGATTTATGCAAAACTGTATATGTAT CAGATTTGTAGAGCCTTGGCATACATTCACAACAGCATTGGAGTGTGCCACAGGGACATT AAGCCGCAAAATCTCCTGGTTAATCCTCATACCCATCAGCTAAAATTGTGTGACTTTGGC AGCGCGAAAGTTCTGGTAAAAGGCGAACCAAACATTTCTTACATCTGTTCTAGGTACTAC AGAGCTCCAGAGCTCATATTTGGTGCTACTGAATACACAACAGCCATTGATGTTTGGTCT GCTGGCTGTGTGCTCGCTGAGCTGCTTCTAGGACAGCCTCTGTTCCCTGGAGAAAGCGGT GTTGATCAGCTTGTTGAAATCATCAAGGTTCTGGGCACACCCACACGTGAAGAAATTAAG TGCATGAATCCAAATTATACCGAGTTTAAATTCCCGCAAATCAAAGCTCACCCATGGCAT AAGATATTCCATAAAAGGATGCCTGCTGAAGCGGTAGATCTCGTGTCCAGGCTTCTGCAG TACTCACCAAAACTTCGGTCGACTGCTTTGGAAGCATTGGTCCATCCGTTCTTTGATGAA CTTCGGGATCCAAACACCCGCTTACCGAATGGTCGTTTTCTTCCGCCTCTCTTCAATTTT AAGCCCCATGAGCTGAAGAACGTGCCGGCGGATTTCATGGTGAAATTGGTCCCTGAGCAT GCACGGAAGCAATGTGCCTTCGTAGGGTGGTGA

Peptide Sequence

PEP ID	Zm00001d024729_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:10:85508260:85512046:-1 gene:Zm00001d024729 transcript:Zm00001d024729_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Shaggy-related protein kinase alpha
Sequence	MASVGVARSSLGFQNGTSSSSDPDRLPNELGSMSIRDDKDVEDIVVNGNGAEPGHIIVTS IDGRNGQAKQTISYMAERVVGHGSFGTVFQAKCLETGETVAIKKVLQDKRYKNRELQTMR VLDHPNVVALKHCFFSKTEKEELYLNLVLEYVPETAHRVIKHYNKMNQRMPLIYAKLYMY QICRALAYIHNSIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYY RAPELIFGATEYTTAIDVWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK CMNPNYTEFKFPQIKAHPWHKIFHKRMPAEAVDLVSRLLQYSPKLRSTALEALVHPFFDE LRDPNTRLPNGRFLPPLFNFKPHELKNVPADFMVKLVPEHARKQCAFVGW

Transcript Sequence

Transcript ID	Zm00001d024729_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:10:85508260:85512046:-1 gene:Zm00001d024729 gene_biotype:protein_coding transcript_biotype:protein_coding description:Shaggy-related protein kinase alpha
Sequence	GTCGCGTCGCGTCCCTCCTTCCTCCCTCTCCATTTCCGCCACCACCCCCCCTCTCTCTCT CTCTTCTTCTTCTTCAATCCTCCCTCCCCGCGCCGGAGTTGGAGGAGGGAGAGGGGACAA GCTTTCCGGCGCCGACGCCGACGCGGACCCGGCGCCGACACGATCCGGTGGATCAAGTGC ATCACACCTTTAGGGAGGCCCCTTGGACAGCAGTTTGTGCTGCAAATTCTATATAGCTCT GTCGCAGCATGGCCTCGGTGGGCGTGGCACGCTCTTCTTTGGGATTTCAGAATGGCACAA GTTCTAGCAGTGACCCAGATCGTCTTCCCAACGAGTTGGGCAGTATGAGCATAAGGGACG ACAAGGACGTTGAAGATATTGTAGTCAATGGCAATGGGGCGGAGCCTGGTCATATCATAG TGACCAGCATTGATGGGAGAAATGGGCAGGCAAAGCAGACCATTAGTTACATGGCTGAGC GGGTGGTAGGTCATGGGTCCTTCGGAACCGTTTTCCAGGCCAAGTGTCTTGAAACTGGTG AGACCGTAGCTATAAAAAAGGTTCTTCAAGACAAGAGATACAAGAATCGTGAGCTGCAAA CCATGCGAGTGCTTGACCACCCAAATGTGGTGGCTCTAAAGCACTGTTTCTTCTCAAAGA CTGAGAAAGAGGAGCTTTACCTCAATTTGGTGCTTGAGTATGTACCGGAGACTGCTCATC GTGTCATCAAACATTACAACAAGATGAACCAGCGCATGCCTTTGATTTATGCAAAACTGT ATATGTATCAGATTTGTAGAGCCTTGGCATACATTCACAACAGCATTGGAGTGTGCCACA GGGACATTAAGCCGCAAAATCTCCTGGTTAATCCTCATACCCATCAGCTAAAATTGTGTG ACTTTGGCAGCGCGAAAGTTCTGGTAAAAGGCGAACCAAACATTTCTTACATCTGTTCTA GGTACTACAGAGCTCCAGAGCTCATATTTGGTGCTACTGAATACACAACAGCCATTGATG TTTGGTCTGCTGGCTGTGTGCTCGCTGAGCTGCTTCTAGGACAGCCTCTGTTCCCTGGAG AAAGCGGTGTTGATCAGCTTGTTGAAATCATCAAGGTTCTGGGCACACCCACACGTGAAG AAATTAAGTGCATGAATCCAAATTATACCGAGTTTAAATTCCCGCAAATCAAAGCTCACC CATGGCATAAGATATTCCATAAAAGGATGCCTGCTGAAGCGGTAGATCTCGTGTCCAGGC TTCTGCAGTACTCACCAAAACTTCGGTCGACTGCTTTGGAAGCATTGGTCCATCCGTTCT TTGATGAACTTCGGGATCCAAACACCCGCTTACCGAATGGTCGTTTTCTTCCGCCTCTCT TCAATTTTAAGCCCCATGAGCTGAAGAACGTGCCGGCGGATTTCATGGTGAAATTGGTCC CTGAGCATGCACGGAAGCAATGTGCCTTCGTAGGGTGGTGATCTCTGGATAAGAGGATGA CGACTCGATGATTAGCTGAGGACCAAGTTAATGTCTGTTAGAAACTGCCGGAGATCGACA TTGCCAGATGTGGTGTGGTATAAGATAGGCAATATGTGTGATTATTTTTTGTTCGAGGTT ATCACCCCCCTTGCCCCAGAAAAGATGAGAAGATGTCGATGTAACAAGCCCTCTGCGCTT CTGTAAGTAGATGAGTGTTGCTGCATGCCCCCTGGGTACATGTATCGGTTTGAGCAGAAT TCTGTTTGCCTGAATCGTGCCATCACCACGCAGGGATCCATCCCTTGTGTGACGATGTTC AGCCCAACATTTGTTTATGGATTCAGGCTATTCGTTCATTTGTACTCCTCGCATCCTATG GATGATTAAGCAATATTTGCAATTTTTCTATTTTGATACGTAGTTATTTTAACACCTAAA GAAAAAGTTTGGGTTG