Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d024723_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:10:85128123:85133157:-1 gene:Zm00001d024723 gene_biotype:protein_coding transcript_biotype:protein_coding description:Long chain acyl-CoA synthetase 1
Sequence	ATGGAGGCGAATCCGAAGAACACCTTCACGATCAAAGTGGAGGACGGGAAGCCCGGGAAG GACGGCCGGCTGGCGGTCGGACCGGTGTTCCGGAGCGTTCTGGCCAAGGATGGGTTCCCG CAGCTTGAGCCTGACATGAAGACATCATGGGACGTGTTCAGGGTAGCAGCAGTCAAGTAT GCCGACAACCGGATGCTCGGATGGCGTCCGTTCAAAGATGGAGTGCCAGGGCCCTACTTG TGGAAATCATACAAGGAGATCTACGACGAGGTGCTGCAAGCAGGCTCTGCGTTGCAGAAG CTGGGAGTGCAGCCAGGTTCCCGGGTGGGGATCTACGGAGCGAACTGTCCTCAGTGGATA GTGGCAATGCAGGCTTGCAATGGCTATAGTCTAGTCTGTGTCCCACTGTACGATACTTTA GGTGCGGGAGCTGTCGACTACATCATCGATCATGCCGAGATCGATGTTGTCTTCATACAG GACAAGAAAATAAAAGAGATACTGTCCCCAAACTGCAAGTCTGCCAAGAGACTGAAAGCA TTGGTGGCGTTCACTTCGGCGACAACTGAACAGAACAAAGAAGCGGATCAAATTGGGATC AAAATGTATGCCTGGGACGATTTCTTGAAAGTGGGGAAGGATAATCCTCGTCAACCTTGC CCTCCGCAAGCAAGTGACATCTGCACTGTCATGTACACGAGTGGGACAAGCGGACAGCCC AAAGGTGTGATGCTGACCCATGAAAGCCACGCCATGTATGTGAAAGGGGTGGACCTCTTC ATGGACCAGTTTGATGATAAGATGACAACAGATGATGTCTTCCTGTCGTTTCTCCCGCTT GCTCACATCCTTGACCGCATGATCGAAGAGTATTTCTTTCACAAAGGGGCCTCAATTGGC TACTACCACGGAGATCTGAATGCCTTGAGGGACGACATTGTGGAGCTGAAGCCGACTCTA CTGGTTGGGGTGCCCCGAGTGTACGAAAGGATTTATGAAGGTATCTTGAAGGCCATTGCG GAACTCAGACCTCTAAGAAGGGTCATCTTTAATGCTTTGTACAACCGCAAACTGGCAAGC ATGAAAGCAGGCTACTCGCACAAAACCGCTTCACCTTTCGCGGACATGCTGGCTTTTCGC AAGGTCAAGGCAAGGCTTGGAGGTCGTCTTCGCTTACTGATTTCAGGAGGGGCTCCGTTG AGTAATGAGATCGAGGAGTTCATGAGAGTGACCACCTGTGCATACTTCATCCAAGGCTAT GGTTTAACAGAAACACTGGGACCTAGCACTGTCTGCTACATCGACGACATGGCCCTGGTC GGAAGCGCTGGTGTGCCTGCCACCTACACCGAAATTCGGCTGGAAGAAGTGCCCGAGATG GGTTATAATCCACTCGGCGTTCCTTCGCGTGGTGAAATCTGCATCCGGGGAAAATCCCTC TTCGCTGGGTACTACAAAAGTCCAGAACTCACAAACGAAGCCATCGTTGATGGGTGGTTT CATACAGGTGACATTGGAGAGATGACCCCAGACGGGATCTTGAAGGTGATTGACAGAAAA AAGAACATATTTAAGCTGTCGCAAGGGGAGTATGTTGCGGTTGAGTACCTGGAGAAAGTT TATGGCTTCCCTCCACTCGTTGAAGATATCTGGGTATACGGGGACAGTTTCAGATCAAGT TTAGTTGCAGTAGTCAATCCACACCAAGAAAACACAATGAAGTGGGCAGAGTCCAATGGC TACAAGGGTTCTTTTGATGAAATCTGCAAACTTGAAGGACTCAAAGAGTACATCCTGAAA GAGCTGGCAGCCGTTGCGCAGAAGAACAAGCTACGAGGCTTCGAGTACATCAAAGGCGTA GTGTTGGATCCTGTGCCTTTTGACATCGAGAGGGATTTGGTGACTGCAACAATGAAGAAG AAGAGAAAGAATATGCTGAACTATTACCAGTCTGAGATTGACACAATATACAAAAAGCTG GAGGCGCAGAAGAGTGCTGCCAGAGCTAAGTGA

Peptide Sequence

PEP ID	Zm00001d024723_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:10:85128123:85133157:-1 gene:Zm00001d024723 transcript:Zm00001d024723_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Long chain acyl-CoA synthetase 1
Sequence	MEANPKNTFTIKVEDGKPGKDGRLAVGPVFRSVLAKDGFPQLEPDMKTSWDVFRVAAVKY ADNRMLGWRPFKDGVPGPYLWKSYKEIYDEVLQAGSALQKLGVQPGSRVGIYGANCPQWI VAMQACNGYSLVCVPLYDTLGAGAVDYIIDHAEIDVVFIQDKKIKEILSPNCKSAKRLKA LVAFTSATTEQNKEADQIGIKMYAWDDFLKVGKDNPRQPCPPQASDICTVMYTSGTSGQP KGVMLTHESHAMYVKGVDLFMDQFDDKMTTDDVFLSFLPLAHILDRMIEEYFFHKGASIG YYHGDLNALRDDIVELKPTLLVGVPRVYERIYEGILKAIAELRPLRRVIFNALYNRKLAS MKAGYSHKTASPFADMLAFRKVKARLGGRLRLLISGGAPLSNEIEEFMRVTTCAYFIQGY GLTETLGPSTVCYIDDMALVGSAGVPATYTEIRLEEVPEMGYNPLGVPSRGEICIRGKSL FAGYYKSPELTNEAIVDGWFHTGDIGEMTPDGILKVIDRKKNIFKLSQGEYVAVEYLEKV YGFPPLVEDIWVYGDSFRSSLVAVVNPHQENTMKWAESNGYKGSFDEICKLEGLKEYILK ELAAVAQKNKLRGFEYIKGVVLDPVPFDIERDLVTATMKKKRKNMLNYYQSEIDTIYKKL EAQKSAARAK

Transcript Sequence

Transcript ID	Zm00001d024723_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:10:85128123:85133157:-1 gene:Zm00001d024723 gene_biotype:protein_coding transcript_biotype:protein_coding description:Long chain acyl-CoA synthetase 1
Sequence	ATGGCACCCTTGCCCTCGGCATACCGCATATATAGGGAAGGAAGAGGCCTCTCTTCTCCC TCCCATCGCCAGGGCGTCGGAGCGAGCTCATTCTCAACTCGACTCAAGAGCTCTGCCTCC TCCATCTTCCCTTCTCTGGCCTCCGGAGCCACGCTGATCAGAGATGGAGGCGAATCCGAA GAACACCTTCACGATCAAAGTGGAGGACGGGAAGCCCGGGAAGGACGGCCGGCTGGCGGT CGGACCGGTGTTCCGGAGCGTTCTGGCCAAGGATGGGTTCCCGCAGCTTGAGCCTGACAT GAAGACATCATGGGACGTGTTCAGGGTAGCAGCAGTCAAGTATGCCGACAACCGGATGCT CGGATGGCGTCCGTTCAAAGATGGAGTGCCAGGGCCCTACTTGTGGAAATCATACAAGGA GATCTACGACGAGGTGCTGCAAGCAGGCTCTGCGTTGCAGAAGCTGGGAGTGCAGCCAGG TTCCCGGGTGGGGATCTACGGAGCGAACTGTCCTCAGTGGATAGTGGCAATGCAGGCTTG CAATGGCTATAGTCTAGTCTGTGTCCCACTGTACGATACTTTAGGTGCGGGAGCTGTCGA CTACATCATCGATCATGCCGAGATCGATGTTGTCTTCATACAGGACAAGAAAATAAAAGA GATACTGTCCCCAAACTGCAAGTCTGCCAAGAGACTGAAAGCATTGGTGGCGTTCACTTC GGCGACAACTGAACAGAACAAAGAAGCGGATCAAATTGGGATCAAAATGTATGCCTGGGA CGATTTCTTGAAAGTGGGGAAGGATAATCCTCGTCAACCTTGCCCTCCGCAAGCAAGTGA CATCTGCACTGTCATGTACACGAGTGGGACAAGCGGACAGCCCAAAGGTGTGATGCTGAC CCATGAAAGCCACGCCATGTATGTGAAAGGGGTGGACCTCTTCATGGACCAGTTTGATGA TAAGATGACAACAGATGATGTCTTCCTGTCGTTTCTCCCGCTTGCTCACATCCTTGACCG CATGATCGAAGAGTATTTCTTTCACAAAGGGGCCTCAATTGGCTACTACCACGGAGATCT GAATGCCTTGAGGGACGACATTGTGGAGCTGAAGCCGACTCTACTGGTTGGGGTGCCCCG AGTGTACGAAAGGATTTATGAAGGTATCTTGAAGGCCATTGCGGAACTCAGACCTCTAAG AAGGGTCATCTTTAATGCTTTGTACAACCGCAAACTGGCAAGCATGAAAGCAGGCTACTC GCACAAAACCGCTTCACCTTTCGCGGACATGCTGGCTTTTCGCAAGGTCAAGGCAAGGCT TGGAGGTCGTCTTCGCTTACTGATTTCAGGAGGGGCTCCGTTGAGTAATGAGATCGAGGA GTTCATGAGAGTGACCACCTGTGCATACTTCATCCAAGGCTATGGTTTAACAGAAACACT GGGACCTAGCACTGTCTGCTACATCGACGACATGGCCCTGGTCGGAAGCGCTGGTGTGCC TGCCACCTACACCGAAATTCGGCTGGAAGAAGTGCCCGAGATGGGTTATAATCCACTCGG CGTTCCTTCGCGTGGTGAAATCTGCATCCGGGGAAAATCCCTCTTCGCTGGGTACTACAA AAGTCCAGAACTCACAAACGAAGCCATCGTTGATGGGTGGTTTCATACAGGTGACATTGG AGAGATGACCCCAGACGGGATCTTGAAGGTGATTGACAGAAAAAAGAACATATTTAAGCT GTCGCAAGGGGAGTATGTTGCGGTTGAGTACCTGGAGAAAGTTTATGGCTTCCCTCCACT CGTTGAAGATATCTGGGTATACGGGGACAGTTTCAGATCAAGTTTAGTTGCAGTAGTCAA TCCACACCAAGAAAACACAATGAAGTGGGCAGAGTCCAATGGCTACAAGGGTTCTTTTGA TGAAATCTGCAAACTTGAAGGACTCAAAGAGTACATCCTGAAAGAGCTGGCAGCCGTTGC GCAGAAGAACAAGCTACGAGGCTTCGAGTACATCAAAGGCGTAGTGTTGGATCCTGTGCC TTTTGACATCGAGAGGGATTTGGTGACTGCAACAATGAAGAAGAAGAGAAAGAATATGCT GAACTATTACCAGTCTGAGATTGACACAATATACAAAAAGCTGGAGGCGCAGAAGAGTGC TGCCAGAGCTAAGTGAAGAGATGTGCCCTATTCGACCATCAGCTGAAAACAAGGGAAACG ACACCGTTGTAAATTTCACATTAATATTGCGAAGTAACAACTCAGGGCTATGAGTAAGGA ATAAAATGTATATTGTGCCTTTGTCTATAGTACCGGATGATTCCCAAATCCCAA