Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d024718_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:10:84950298:84953025:-1 gene:Zm00001d024718 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-carotene isomerase D27 chloroplastic
Sequence

ATGGCGCCGCCGCTCGCGACACGCGGCCTCCCCCTCGCCTCCCGCGGCCCGCCTTCTTGC
GCGGCCTCCTGCTCCTCGTGCCTGCCCTCGTATCTCCAGCTCGGTCGCCGGCCAAGCCGC
CGGTTCCGCTGCTCCTCGCCACAGGTCGATGCAGCGGCGGTGCCGCCGGGGAAGGGCGGG
GAGTACCGGCCCTCTTTCGCGGACGACCTCCTCCTCGCCTTCTTCCGGAGCAAGATGGTG
AAGGAGGTTGGATGGGATTCTGAAAAGCCTGGGTATGCTGGACTAATGGAGGTAGCAAAC
CGTCTCATGGTCAAGGGAAAGAGTGCTTTGGAGACTGAGCAGGCTGCTGTCCGAGTACTA
CAGTCACTGTTTCCACCTCTCTTGCTTGTTCTTTACAAAGCTCTTTTAGCGCCAATTGCT
AATGGCCAACTAGCCGCTATGATGCTTGCTAGGGCGACAGCAATTTCATGTCAATGGTTG
ATGGGCTCATGCTCAGTTAATTCAGTCACTCTGCCTGATGGAAAATCATGGTCAAGTGGG
GTGTTCGTTGAGAAATGCAAGTACCTGGAAGAGAGCAAGTGCCTTGGCATTTGCATCAAC
ACATGCAAACTGCCAACTCAGACTTTCTTCAAAGATCACATGGGTGTTGATTTGTACATG
GAGCCAAATTTTGAAGACTATAGCTGCCAGTTCAACTTCGGGGTGCCGCCTCCACCTCTT
GATACTGACAAAGCCCTCAAGGAACCGTGCTTGGACATCTGCACAAACGCAAGGCGGCGT
AGAGAGCTCGGAAGAAATAGCAGCCCAGATGAGCTCAGTTGCCCCCAAGTTTGA

Peptide Sequence

PEP ID

Zm00001d024718_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:10:84950298:84953025:-1 gene:Zm00001d024718 transcript:Zm00001d024718_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-carotene isomerase D27 chloroplastic
Sequence

MAPPLATRGLPLASRGPPSCAASCSSCLPSYLQLGRRPSRRFRCSSPQVDAAAVPPGKGG
EYRPSFADDLLLAFFRSKMVKEVGWDSEKPGYAGLMEVANRLMVKGKSALETEQAAVRVL
QSLFPPLLLVLYKALLAPIANGQLAAMMLARATAISCQWLMGSCSVNSVTLPDGKSWSSG
VFVEKCKYLEESKCLGICINTCKLPTQTFFKDHMGVDLYMEPNFEDYSCQFNFGVPPPPL
DTDKALKEPCLDICTNARRRRELGRNSSPDELSCPQV

Transcript Sequence

Transcript ID

Zm00001d024718_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:84950298:84953025:-1 gene:Zm00001d024718 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-carotene isomerase D27 chloroplastic
Sequence

ACCACGGCGGCAGCCACTGGTTGGCAGCGGTTGTCCTTCTCCGGTGTCCATGGCGCCGCC
GCTCGCGACACGCGGCCTCCCCCTCGCCTCCCGCGGCCCGCCTTCTTGCGCGGCCTCCTG
CTCCTCGTGCCTGCCCTCGTATCTCCAGCTCGGTCGCCGGCCAAGCCGCCGGTTCCGCTG
CTCCTCGCCACAGGTCGATGCAGCGGCGGTGCCGCCGGGGAAGGGCGGGGAGTACCGGCC
CTCTTTCGCGGACGACCTCCTCCTCGCCTTCTTCCGGAGCAAGATGGTGAAGGAGGTTGG
ATGGGATTCTGAAAAGCCTGGGTATGCTGGACTAATGGAGGTAGCAAACCGTCTCATGGT
CAAGGGAAAGAGTGCTTTGGAGACTGAGCAGGCTGCTGTCCGAGTACTACAGTCACTGTT
TCCACCTCTCTTGCTTGTTCTTTACAAAGCTCTTTTAGCGCCAATTGCTAATGGCCAACT
AGCCGCTATGATGCTTGCTAGGGCGACAGCAATTTCATGTCAATGGTTGATGGGCTCATG
CTCAGTTAATTCAGTCACTCTGCCTGATGGAAAATCATGGTCAAGTGGGGTGTTCGTTGA
GAAATGCAAGTACCTGGAAGAGAGCAAGTGCCTTGGCATTTGCATCAACACATGCAAACT
GCCAACTCAGACTTTCTTCAAAGATCACATGGGTGTTGATTTGTACATGGAGCCAAATTT
TGAAGACTATAGCTGCCAGTTCAACTTCGGGGTGCCGCCTCCACCTCTTGATACTGACAA
AGCCCTCAAGGAACCGTGCTTGGACATCTGCACAAACGCAAGGCGGCGTAGAGAGCTCGG
AAGAAATAGCAGCCCAGATGAGCTCAGTTGCCCCCAAGTTTGATATGCTCCCTGTAAAAG
ACTGCACATCATAGATTATTGCGCGTTGGGCTTGGGCATGGTGTGCCTTGCTTGCATTTG
TCAGTCTTCGTGCAACGATGTCAAGTAATTTCGGTAATACCATTTCTATGTTGCAG