Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d024709_T006
CDS Infomation

cds chromosome:B73_RefGen_v4:10:84540417:84545906:1 gene:Zm00001d024709 gene_biotype:protein_coding transcript_biotype:protein_coding description:NOL1/NOP2/sun family

Sequence

ATGGAAGAGCCGGATTGCCCAGAAGGTTCCGTTCCCGACCGCGGAGGAGAGCGGCGGACG
GCTTCCCTGCCGCTGCCGGCCGCCTTCCTCGAGTTCCTCAGCGAGAACGGCCTGGACCCT
GCGGTGTACTCAATGGCAGCCACCATCCCGCGCTACATAAGGCTAAAACCAGGCATGGAG
TCCAAGATCGCAGAGATTGAAGCCGAGTTGAAGTGTGCCCTTGACAAGGTTTTATGGCTG
CCTGGGTTCTATGCGATTCCGCCGGAAATTCAGATTGCTGGCTCCAAGGCTTATCAGCAA
GGGAAGATCTATGGAATTGATGCCGCTTCTGGAGCTGCTATATTAGCACTTGATGTTCGA
CCAGGAAATCATGTTCTTGACCTCTGTGCTGCCCCAGGTGCAAAGCTTTGCATGCTCGCA
GATACGCTTGGAACCACTGGTTCTCTGACTGGTGTTGATGTTGCAAAGCACCGCCTTGCG
GCCTGTCGTACAATGTTGCAGAAGTATTCTCTTGGTGACCGTACTCGGCTCTTTGTTGCT
GATGGAACTTTGTTTTCCCTTTTACCTGTGAACTCCAGGATGCAAAGAATGGAAGGGTCA
ATTGGCGTTGAAGAAAATGGAAGCATATTCCCAGAATGGACTTCAAGGAGATCATGGAAG
GATCGGCAGAAGACTAGGAAAGCAAATGCAAATGGTCAACAGCACCTACTGGCAGCTTCA
GAACCTGAACTGATATACTATGGTAAACATTCAGGATTAGTTGGACAGTGTAAATCTGAT
GTCTTTTGTCCATCAGTTGATGATGAAGCTTGTACATCTGGCTATGACAAGGTCCTAGTG
GATGCGGAGTGTACTCATGATGGATCCATAAAACATATTCAAAAATTTGAATTCTGGGGA
TGGAAAAGTCTAGATCGCCGCGTACTTGATGCTGAAAGAACTGAGAACCTTCTTCAGCTT
CAGTTACATCTCCTCACAAATGGTTTTAAATTGTTGAAAACCGGTGGATCACTTGTATAT
AGTACTTGCAGCTTGACAGTTGCACAGAATGAATGCGTGGTTCAACAATTCCTTTCAACA
CACCCTTCTGCAGATTTGCAGAAGATCAATTTGGCCGACAATTGGCCCTGCAGAAGTGGC
GGCATCCCCAAAACACTGCGATTCGATCCTGCAGTTTCACAAACCAGTGGTCTTTTTGTT
GCCAAGTTCTGTAAACTACCGACTTAA

Peptide Sequence

PEP ID

Zm00001d024709_P006
PEP Infomation

pep chromosome:B73_RefGen_v4:10:84540417:84545906:1 gene:Zm00001d024709 transcript:Zm00001d024709_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:NOL1/NOP2/sun family

Sequence

MEEPDCPEGSVPDRGGERRTASLPLPAAFLEFLSENGLDPAVYSMAATIPRYIRLKPGME
SKIAEIEAELKCALDKVLWLPGFYAIPPEIQIAGSKAYQQGKIYGIDAASGAAILALDVR
PGNHVLDLCAAPGAKLCMLADTLGTTGSLTGVDVAKHRLAACRTMLQKYSLGDRTRLFVA
DGTLFSLLPVNSRMQRMEGSIGVEENGSIFPEWTSRRSWKDRQKTRKANANGQQHLLAAS
EPELIYYGKHSGLVGQCKSDVFCPSVDDEACTSGYDKVLVDAECTHDGSIKHIQKFEFWG
WKSLDRRVLDAERTENLLQLQLHLLTNGFKLLKTGGSLVYSTCSLTVAQNECVVQQFLST
HPSADLQKINLADNWPCRSGGIPKTLRFDPAVSQTSGLFVAKFCKLPT

Transcript Sequence

Transcript ID

Zm00001d024709_T006
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:84540417:84545906:1 gene:Zm00001d024709 gene_biotype:protein_coding transcript_biotype:protein_coding description:NOL1/NOP2/sun family

Sequence

AGAGTCGCAGAGAACAAACGGCTGCCACAGTGCCACGGCTTGCTCTGCGGCGAGCCTTGG
GCACCGAGGCGCCTCCCATCCTCTAAGCTCCAGTTTTCAAGTTGTTGCGCAGTTCCTTCT
TCTCGGGGAAATCGATCCGGAGAGAATGGAAGAGCCGGATTGCCCAGAAGGTTCCGTTCC
CGACCGCGGAGGAGAGCGGCGGACGGCTTCCCTGCCGCTGCCGGCCGCCTTCCTCGAGTT
CCTCAGCGAGAACGGCCTGGACCCTGCGGTGTACTCAATGGCAGCCACCATCCCGCGCTA
CATAAGGCTAAAACCAGGCATGGAGTCCAAGATCGCAGAGATTGAAGCCGAGTTGAAGTG
TGCCCTTGACAAGGTTTTATGGCTGCCTGGGTTCTATGCGATTCCGCCGGAAATTCAGAT
TGCTGGCTCCAAGGCTTATCAGCAAGGGAAGATCTATGGAATTGATGCCGCTTCTGGAGC
TGCTATATTAGCACTTGATGTTCGACCAGGAAATCATGTTCTTGACCTCTGTGCTGCCCC
AGGTGCAAAGCTTTGCATGCTCGCAGATACGCTTGGAACCACTGGTTCTCTGACTGGTGT
TGATGTTGCAAAGCACCGCCTTGCGGCCTGTCGTACAATGTTGCAGAAGTATTCTCTTGG
TGACCGTACTCGGCTCTTTGTTGCTGATGGAACTTTGTTTTCCCTTTTACCTGTGAACTC
CAGGATGCAAAGAATGGAAGGGTCAATTGGCGTTGAAGAAAATGGAAGCATATTCCCAGA
ATGGACTTCAAGGAGATCATGGAAGGATCGGCAGAAGACTAGGAAAGCAAATGCAAATGG
TCAACAGCACCTACTGGCAGCTTCAGAACCTGAACTGATATACTATGGTAAACATTCAGG
ATTAGTTGGACAGTGTAAATCTGATGTCTTTTGTCCATCAGTTGATGATGAAGCTTGTAC
ATCTGGCTATGACAAGGTCCTAGTGGATGCGGAGTGTACTCATGATGGATCCATAAAACA
TATTCAAAAATTTGAATTCTGGGGATGGAAAAGTCTAGATCGCCGCGTACTTGATGCTGA
AAGAACTGAGAACCTTCTTCAGCTTCAGTTACATCTCCTCACAAATGGTTTTAAATTGTT
GAAAACCGGTGGATCACTTGTATATAGTACTTGCAGCTTGACAGTTGCACAGAATGAATG
CGTGGTTCAACAATTCCTTTCAACACACCCTTCTGCAGATTTGCAGAAGATCAATTTGGC
CGACAATTGGCCCTGCAGAAGTGGCGGCATCCCCAAAACACTGCGATTCGATCCTGCAGT
TTCACAAACCAGTGGTCTTTTTGTTGCCAAGTTCTGTAAACTACCGACTTAAAGCATTTT
CTGGTCTATCTTCCTGGACCATTCATGTCCTCTCACATGTAAAACTGGGTTTTCCTGTCA
GCAACTAAATTACAAGTTGGTTCC