Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d024702_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:10:84130306:84133108:-1 gene:Zm00001d024702 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:orange pericarp2 description:Tryptophan synthase beta chain 2%2C chloroplastic
Sequence	ATGGCCACCACCGCCGCCGCCGCCATTCGCAGCCCTACCCGCGCCGCCGCACCAGGACCC GCCGCGCCGGCCCAGCAGCGCGCGGTTTTGCGGGTGGCGTCGTCCAGGACCTCCTCCGCC CGCCCCCGAAGGGCCGCCGCCGCCGTGGCCGCGGCCGCAATGCAGCCGGCCAAGGCGGTC GCCGCGGAGGCGGCCTCCCCCGCCGCGGTGGAGATGGGGAACGGCGCCGCGGCGCCGGGG CTGCAGAGGCCCGACGCCATGGGCAGGTTCGGGAGGTTCGGCGGCAAGTACGTCCCCGAG ACGCTCATGCACGCGCTCACCGAGCTCGAGAGCGCCTTCCACGCGCTCGCCACCGACGAC GAGTTCCAGAAAGAACTGGACGGTATTCTCAAGGACTACGTTGGACGTGAGAGCCCCCTA TACTTCGCGGAGCGCCTAACGGAGCACTACAAGCGCGCCGATGGCACAGGCCCGCTCATC TACCTCAAGAGGGAGGACCTTAACCACACGGGTGCCCACAAGATCAACAATGCCGTGGCG CAGGCCTTGCTTGCCAAGCGACTTGGGAAGCAGCGCATCATTGCCGAGACAGGGGCTGGT CAGCACGGCGTCGCCACCGCCACCGTGTGCGCCCGTTTCGGGCTGCAGTGCATCATCTAC ATGGGCGCACAGGATATGGAGAGGCAGGCGCTCAATGTTTTCCGGATGAGGCTTCTTGGT GCAGAGGTCAGGGCGGTACATTCTGGGACAGCAACCCTGAAGGATGCAACTTCAGAGGCT ATCCGTGACTGGGTCACAAATGTGGAGACCACACACTATATCTTGGGCTCTGTTGCCGGT CCGCACCCGTACCCGATGATGGTGAGGGAGTTCCATAAGGTTATTGGCAAGGAAACCCGG AGGCAGGCCATGGACAAGTGGGGTGGCAAGCCGGACGTATTGGTTGCCTGCGTCGGCGGC GGATCAAACGCCATGGGCTTATTCCATGAGTTTGTTGAGGATCAAGATGTGAGGCTGGTT GGAGTGGAGGCAGCTGGCCATGGCGTAGACACCGACAAGCATGCGGCGACTTTGACAAAG GGCCAAGTCGGAGTTCTCCATGGATCCATGAGCTATTTGCTGCAGGATGATGACGGACAA GTTATCGAACCCCACTCCATCAGTGCTGGGCTCGATTACCCTGGCGTTGGACCCGAGCAC AGTTTCTTGAAGGACATTGGACGTGCCGAATACGATAGTGTGACTGACCAGGAGGCACTG GATGCTTTCAAGCGCGTGTCTCGGTTGGAGGGCATCATCCCTGCCCTGGAGACCTCCCAC GCGCTGGCCTACCTTGAGAAGCTCTGCCCGACACTGGCGGACGGCGTGAGGGTGGTGGTG AACTGCAGCGGGCGAGGAGACAAGGACGTGCACACCGCCAGCAAGTACCTGGACGTCTAA

Peptide Sequence

PEP ID	Zm00001d024702_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:10:84130306:84133108:-1 gene:Zm00001d024702 transcript:Zm00001d024702_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:orange pericarp2 description:Tryptophan synthase beta chain 2%2C chloroplastic
Sequence	MATTAAAAIRSPTRAAAPGPAAPAQQRAVLRVASSRTSSARPRRAAAAVAAAAMQPAKAV AAEAASPAAVEMGNGAAAPGLQRPDAMGRFGRFGGKYVPETLMHALTELESAFHALATDD EFQKELDGILKDYVGRESPLYFAERLTEHYKRADGTGPLIYLKREDLNHTGAHKINNAVA QALLAKRLGKQRIIAETGAGQHGVATATVCARFGLQCIIYMGAQDMERQALNVFRMRLLG AEVRAVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVREFHKVIGKETR RQAMDKWGGKPDVLVACVGGGSNAMGLFHEFVEDQDVRLVGVEAAGHGVDTDKHAATLTK GQVGVLHGSMSYLLQDDDGQVIEPHSISAGLDYPGVGPEHSFLKDIGRAEYDSVTDQEAL DAFKRVSRLEGIIPALETSHALAYLEKLCPTLADGVRVVVNCSGRGDKDVHTASKYLDV

Transcript Sequence

Transcript ID	Zm00001d024702_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:10:84130306:84133108:-1 gene:Zm00001d024702 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:orange pericarp2 description:Tryptophan synthase beta chain 2%2C chloroplastic
Sequence	CACGCAGAGCCCCTGCCCCCACAGCCTATCTATCCCCTTCCCCTCGTCGATTTATTATTC TCATGGCCACCACCGCCGCCGCCGCCATTCGCAGCCCTACCCGCGCCGCCGCACCAGGAC CCGCCGCGCCGGCCCAGCAGCGCGCGGTTTTGCGGGTGGCGTCGTCCAGGACCTCCTCCG CCCGCCCCCGAAGGGCCGCCGCCGCCGTGGCCGCGGCCGCAATGCAGCCGGCCAAGGCGG TCGCCGCGGAGGCGGCCTCCCCCGCCGCGGTGGAGATGGGGAACGGCGCCGCGGCGCCGG GGCTGCAGAGGCCCGACGCCATGGGCAGGTTCGGGAGGTTCGGCGGCAAGTACGTCCCCG AGACGCTCATGCACGCGCTCACCGAGCTCGAGAGCGCCTTCCACGCGCTCGCCACCGACG ACGAGTTCCAGAAAGAACTGGACGGTATTCTCAAGGACTACGTTGGACGTGAGAGCCCCC TATACTTCGCGGAGCGCCTAACGGAGCACTACAAGCGCGCCGATGGCACAGGCCCGCTCA TCTACCTCAAGAGGGAGGACCTTAACCACACGGGTGCCCACAAGATCAACAATGCCGTGG CGCAGGCCTTGCTTGCCAAGCGACTTGGGAAGCAGCGCATCATTGCCGAGACAGGGGCTG GTCAGCACGGCGTCGCCACCGCCACCGTGTGCGCCCGTTTCGGGCTGCAGTGCATCATCT ACATGGGCGCACAGGATATGGAGAGGCAGGCGCTCAATGTTTTCCGGATGAGGCTTCTTG GTGCAGAGGTCAGGGCGGTACATTCTGGGACAGCAACCCTGAAGGATGCAACTTCAGAGG CTATCCGTGACTGGGTCACAAATGTGGAGACCACACACTATATCTTGGGCTCTGTTGCCG GTCCGCACCCGTACCCGATGATGGTGAGGGAGTTCCATAAGGTTATTGGCAAGGAAACCC GGAGGCAGGCCATGGACAAGTGGGGTGGCAAGCCGGACGTATTGGTTGCCTGCGTCGGCG GCGGATCAAACGCCATGGGCTTATTCCATGAGTTTGTTGAGGATCAAGATGTGAGGCTGG TTGGAGTGGAGGCAGCTGGCCATGGCGTAGACACCGACAAGCATGCGGCGACTTTGACAA AGGGCCAAGTCGGAGTTCTCCATGGATCCATGAGCTATTTGCTGCAGGATGATGACGGAC AAGTTATCGAACCCCACTCCATCAGTGCTGGGCTCGATTACCCTGGCGTTGGACCCGAGC ACAGTTTCTTGAAGGACATTGGACGTGCCGAATACGATAGTGTGACTGACCAGGAGGCAC TGGATGCTTTCAAGCGCGTGTCTCGGTTGGAGGGCATCATCCCTGCCCTGGAGACCTCCC ACGCGCTGGCCTACCTTGAGAAGCTCTGCCCGACACTGGCGGACGGCGTGAGGGTGGTGG TGAACTGCAGCGGGCGAGGAGACAAGGACGTGCACACCGCCAGCAAGTACCTGGACGTCT AAAACACCAGCGAGGAGGCTGGTTTCCATGTCAAGTTTTGGAGGGTTCAGCAGTAATTAA TTTAGCGCTGTTCTTTTTGGATAAAAGCACAAATAACCTGGAAGCTGGTATTGTTGTTGT AGCCGGTAGTGCCCCCCTGTTTTTTTATTTTACAAGTAATCTGAATGGCTTTGGAGTGCA TAATCAATAATCAAATAAATACAAA