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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d024648_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:10:82069582:82070175:-1 gene:Zm00001d024648 gene_biotype:protein_coding transcript_biotype:protein_coding description:Retrotransposon protein [Source:UniProtKB/TrEMBL;Acc:C0HEA1]
Sequence

ATGGCCGCCAGAGCAAGAACCCACGGCCCTCTCTTCTCCCTCCTCCCCCTCCTCCTCGCG
GTACTCACCGTCGGTAATAGCAGCAGCAGCCGGTGCCCCGGCGTGCCGTCCATGACGGCG
CAGCAGGCGTGCGGCGCGGTGGCCGGGACGCGGCGCATGCTGGAGCTCTGCCTCCGCACC
CTCCGCGGCGGCGCGCCGCTGCCGGTGACCCGGCACGCGGCGGTGGCCGTGCGCGGCGCG
CTCGACGCGTACGCGGCCACGGTGGCCGCTGCGACGTCGCTGCTGGACGGCGGCGCGGTG
CCGGCCGACGGCGAGAGGGCCGCGTTCGGCAGCTGCATGGTGGGCTACGGCAGCGCCCGC
GTCGCCATGGCGCGCGTCGCCGCCGACCTCGCCGCCGCCGGCTGCGACGGCGGCGGCGCC
CGGGCCGCGGAGCTCGAGGCGGGGTACACGGCCGGGCTCCGTGGCATGGATGCGTGCACC
GGGGGCATGCTCAGCTACCCGGCGTCGCCCTTGTACGCCAGGAACCTCGCCGACCGCAAC
GTGACCTTGCTCGCCGCGTTGCTCTGCAGCCTCGTGCCTGCGCCGCTGGCTTGA

Peptide Sequence

PEP ID

Zm00001d024648_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:10:82069582:82070175:-1 gene:Zm00001d024648 transcript:Zm00001d024648_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Retrotransposon protein [Source:UniProtKB/TrEMBL;Acc:C0HEA1]
Sequence

MAARARTHGPLFSLLPLLLAVLTVGNSSSSRCPGVPSMTAQQACGAVAGTRRMLELCLRT
LRGGAPLPVTRHAAVAVRGALDAYAATVAAATSLLDGGAVPADGERAAFGSCMVGYGSAR
VAMARVAADLAAAGCDGGGARAAELEAGYTAGLRGMDACTGGMLSYPASPLYARNLADRN
VTLLAALLCSLVPAPLA

Transcript Sequence

Transcript ID

Zm00001d024648_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:82069582:82070175:-1 gene:Zm00001d024648 gene_biotype:protein_coding transcript_biotype:protein_coding description:Retrotransposon protein [Source:UniProtKB/TrEMBL;Acc:C0HEA1]
Sequence

ATGGCCGCCAGAGCAAGAACCCACGGCCCTCTCTTCTCCCTCCTCCCCCTCCTCCTCGCG
GTACTCACCGTCGGTAATAGCAGCAGCAGCCGGTGCCCCGGCGTGCCGTCCATGACGGCG
CAGCAGGCGTGCGGCGCGGTGGCCGGGACGCGGCGCATGCTGGAGCTCTGCCTCCGCACC
CTCCGCGGCGGCGCGCCGCTGCCGGTGACCCGGCACGCGGCGGTGGCCGTGCGCGGCGCG
CTCGACGCGTACGCGGCCACGGTGGCCGCTGCGACGTCGCTGCTGGACGGCGGCGCGGTG
CCGGCCGACGGCGAGAGGGCCGCGTTCGGCAGCTGCATGGTGGGCTACGGCAGCGCCCGC
GTCGCCATGGCGCGCGTCGCCGCCGACCTCGCCGCCGCCGGCTGCGACGGCGGCGGCGCC
CGGGCCGCGGAGCTCGAGGCGGGGTACACGGCCGGGCTCCGTGGCATGGATGCGTGCACC
GGGGGCATGCTCAGCTACCCGGCGTCGCCCTTGTACGCCAGGAACCTCGCCGACCGCAAC
GTGACCTTGCTCGCCGCGTTGCTCTGCAGCCTCGTGCCTGCGCCGCTGGCTTGA