Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d024621_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:10:80562832:80565140:1 gene:Zm00001d024621 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phloem-specific lectin

Sequence

ATGGAGGAGGCGGCGGTTGCACGGACGACCAGCGAGACCCAGGTGGGCGACCTGCCGGAG
GTGTGCCTGGCGCAGGCCATCGCGCGGACCTCCCCGCGCGACGCCTGCCGCTGCGCCGCC
GTGTCCCCGGCCTTCCGCGCCGCCGCCGACTCCGACCAGGTCTGGCGCGCCTTCCTCCCC
GAGCAGCTCGAGGCGGCTGAGGACCACTTGGACAGCCGCCGCGTGTCTCCGCCGTCGCAG
GCGGCTCACCCAGCGGCGACCGTGCGCGGCCTCAGCAAGAAGGACGCCTACCTCAGCCTC
TGCGACGCTGCCGGCGCCGTGGCCGTCGACGGCAGCGGGTGCAGGGTGTGGCTGGAGAGG
GCCAGCGGCGCCACGTGCTACGCGCTGTCGGCTCGCAGGCTCAGCCTGCCCTGGGACGAC
GGCGAGTTCTCCTGGAGGTTCACGCACCACCCACGCTCCAGGTTCGCGGAGGTGGCGGAG
CTGGTGGACTGCACGTGCCTGGACATCTACGGGAGCCTGCCGCTGGCCGCGCTGACGCCG
GCGACGGTCTACGCGGCGTTCCTGGTGTACGGCACCGCGCCGGAGGGGGCCTACCGCGGC
CTGAGCTACCCGGACCAGGAGACGGCCGTGGCCGTGGGCGGGCGGGTCGTCGCGCGCCAC
GCCGTGTGCCTCCGCCCCGACGACGCCGAGGCGCGCAAGTTCAGGGGCCGCGGCGCCGGG
GAGGAGGCGAGGAGGCCGAGCCTGCGGGCTGACGGGTGGGAGGAGATGGAGATGGGACGC
CTGCGCACGCCGCCCGTGGAAAGCGGCGGCGGCGGCGGCGACGTCTGCGTGGTGCAGGCG
AGCTTCGAGGTGCTCGGCTGGTACCCCAAGCGCGGCCTCGTCGTCGAGGGCATCGAGTTC
AGGGCCCTCCACGATGCTTCATGA

Peptide Sequence

PEP ID

Zm00001d024621_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:10:80562832:80565140:1 gene:Zm00001d024621 transcript:Zm00001d024621_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phloem-specific lectin

Sequence

MEEAAVARTTSETQVGDLPEVCLAQAIARTSPRDACRCAAVSPAFRAAADSDQVWRAFLP
EQLEAAEDHLDSRRVSPPSQAAHPAATVRGLSKKDAYLSLCDAAGAVAVDGSGCRVWLER
ASGATCYALSARRLSLPWDDGEFSWRFTHHPRSRFAEVAELVDCTCLDIYGSLPLAALTP
ATVYAAFLVYGTAPEGAYRGLSYPDQETAVAVGGRVVARHAVCLRPDDAEARKFRGRGAG
EEARRPSLRADGWEEMEMGRLRTPPVESGGGGGDVCVVQASFEVLGWYPKRGLVVEGIEF
RALHDAS

Transcript Sequence

Transcript ID

Zm00001d024621_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:80562832:80565140:1 gene:Zm00001d024621 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phloem-specific lectin

Sequence

AGCTAGCTTGGCGTTTGCCAGCACGCATAGCGATTGCGACTATTGGCGATTGTGTAGGTG
TAGTGTGCCTGTCGAGGAACGAGAGCCTCAAGACCCGAGCGTCTTCAGATATGGAGGAGG
CGGCGGTTGCACGGACGACCAGCGAGACCCAGGTGGGCGACCTGCCGGAGGTGTGCCTGG
CGCAGGCCATCGCGCGGACCTCCCCGCGCGACGCCTGCCGCTGCGCCGCCGTGTCCCCGG
CCTTCCGCGCCGCCGCCGACTCCGACCAGGTCTGGCGCGCCTTCCTCCCCGAGCAGCTCG
AGGCGGCTGAGGACCACTTGGACAGCCGCCGCGTGTCTCCGCCGTCGCAGGCGGCTCACC
CAGCGGCGACCGTGCGCGGCCTCAGCAAGAAGGACGCCTACCTCAGCCTCTGCGACGCTG
CCGGCGCCGTGGCCGTCGACGGCAGCGGGTGCAGGGTGTGGCTGGAGAGGGCCAGCGGCG
CCACGTGCTACGCGCTGTCGGCTCGCAGGCTCAGCCTGCCCTGGGACGACGGCGAGTTCT
CCTGGAGGTTCACGCACCACCCACGCTCCAGGTTCGCGGAGGTGGCGGAGCTGGTGGACT
GCACGTGCCTGGACATCTACGGGAGCCTGCCGCTGGCCGCGCTGACGCCGGCGACGGTCT
ACGCGGCGTTCCTGGTGTACGGCACCGCGCCGGAGGGGGCCTACCGCGGCCTGAGCTACC
CGGACCAGGAGACGGCCGTGGCCGTGGGCGGGCGGGTCGTCGCGCGCCACGCCGTGTGCC
TCCGCCCCGACGACGCCGAGGCGCGCAAGTTCAGGGGCCGCGGCGCCGGGGAGGAGGCGA
GGAGGCCGAGCCTGCGGGCTGACGGGTGGGAGGAGATGGAGATGGGACGCCTGCGCACGC
CGCCCGTGGAAAGCGGCGGCGGCGGCGGCGACGTCTGCGTGGTGCAGGCGAGCTTCGAGG
TGCTCGGCTGGTACCCCAAGCGCGGCCTCGTCGTCGAGGGCATCGAGTTCAGGGCCCTCC
ACGATGCTTCATGACTGGTTGAGAGTTGAGACCGCATGAATATACGTTGTAAATGAGATG
TAAACTCGATTGGTAAATTGTAACAATCATTTACAGTGTTCTTGATAGGTAAATTCATCG
GAGACATGATC