Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d024583_T011
CDS Infomation	cds chromosome:B73_RefGen_v4:10:79179198:79184267:1 gene:Zm00001d024583 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA polymerase II large subunit family protein
Sequence	ATGTCTATCATGGGGCATCGCATCAAAATTATGCCCTACTCAACTTTCCGGTTGAACTTG TCTGTCACTTCACCATACAATGCTGACTTCGACGGTGATGAGATGAATATGCATGTCCCC CAGTCATTTGAGACCAGAGCAGAAGTTCTGGAGTTAATGATGGTGCCAAAATGCATTGTC TCTCCACAATCAAATAGGCCTGTAATGGGTATTGTCCAAGACACACTGCTTGGGTGTCGC AAAATTACTAAAAGGGACACTCTAATTGAAAAGGATGTATTTATGAACATCTTGATGTGG TGGCAAGATTTCGATGGAAAGATTCCTGCACCTACCATTTTGAAACCTAGGCCTATTTGG ACTGGGAAACAAGTTTTTAACTTAATTATCCCCAAGCAAATAAATTTAATTCGGTTTTCA GCATGGCATTCGGAAGAAGAAAAAGGATTTATTACTCCCGGTGATACTATGGTCAGGATA GAGAAGGGAGAGCTTCTGTCTGGCACACTTTGCAAAAAGAGTCTTGGAACAGGCTCCGGA AGTCTTATCCATGTCATTTGGGAAGAGGTTGGTCCAGATGCTGCCCGGAAGTTCTTAGGA CACACACAGTGGCTTGTAAACTACTGGCTTCTTCAAAATGGTTTCAGTATTGGAATTGGG GATACTATTGCAGATGCATCCACCATGGAAACAATTAATGATACAATATCTAAAGCTAAG AATGCTGTGAAGGAGCTTATTAAAAAAGCTCATGAGAAGCAGTTGGAAGCTGAGCCAGGA CGCACTATGATGGAATCATTTGAAAACAGAGTGAACCAGGTTCTTAACAAAGCCCGTGAT GATGCTGGTAGCAGTGCTCAGAATAGCTTGTCTGAAAGCAACAATTTGAAGGCTATGGTC ACTGCAGGTTCAAAAGGCAGTTTCATTAACATTTCACAAATGACTGCTTGTGTGGGACAG CAGAATGTTGAGGGCAAGCGGATCCCTTTTGGTTTCATTGATCGGACGTTGCCACATTTC ACAAAAGATGACTATGGTCCTGAAAGTCGTGGATTTGTGGAAAATTCTTACCTCCGAGGT CTGACACCGCAAGAATTTTTCTTTCACGCTATGGGTGGTAGGGAAGGTCTTATAGACACT GCTGTGAAAACCTCTGAGACTGGGTATATCCAGAGGAGACTTGTGAAAGCTATGGAGGAC ATCATGGTTAAATATGATGGTACTGTAAGAAATTCTCTTGGAGATGTCATCCAGTTCTTG TATGGAGAAGATGGCATGGATGCTGTTTGGATTGAATCTCAAAAATTGGACTCATTGAAG ATGAAGAAGCCTGAGTTCGATAATGTATTCCGTTATGAGCTGGATGATGAGAATTGGAGA CCTAACTACATGCTACCTGAACATGTTGACGATTTGAAGACCATACGTGAATTCAGAAAT GTGTTCGAGGCAGAGGTTCAAAAGCTAGAAGCTGATCGGTACCAGCTTGGGTCTGAGATC ACCACAACTGGTGACAATTCGTGGCCTATGCCTGTGAACCTCAAGCGACTCATCTGGAAT GCTCAGAAGACATTCAAGATTGATTTTAGAAGACCTTCTGACATGCACCCGATGGAAATT GTGGAAGCGATAGATAAACTGCAAGAAAGACTTAAGGTTGTACCTGGTGATGATGCTATG AGCATTGAGGCCCAGAAGAATGCAACCTTGTTCTTTAATATCCTACTTCGTAGCACGTTT GCTAGCAAGAGGGTCTTGAAGGAATACAGGCTTACAAAGGAAGCTTTTGAATGGGTTATT GGTGAGATTGAATCGAGGTTTCTTCAGTCTTTGGTGGCCCCTGGCGAGATGATTGGATGT GTGGCTGCACAATCTATTGGAGAACCAGCAACTCAGATGACCCTGAATACCTTCCATTAT GCTGGTGTCAGTGCCAAGAATGTCACCCTTGGAGTTCCCAGGTTGAGGGAGATCATTAAT GTTGCCAAGAAGATAAAGACACCATCTTTGTCTGTTTACCTGAAGCCTCAGGTGAACCAG AAGAAAGAATTGGCTAAGAATGTCCAGTGTGCTTTGGAGTACACTACACTGCGTAGTGTT ACCCACGCCACAGAGATATGGTATGATCCTGATCCTCTAGGGACCATCATTGAAGAGGAC ACAGAGTTTGTTCAGTCCTATTATGAAATGCCTGATGAGGACATTGACCCGGATAAAATT TCTCCTTGGTTGCTGCGTATTGAGCTTAACCGTGAGATGATGGTTGATAAGAAGTTGAGC ATGGCTGATATTGCCGAGAAGATTAACCGTGAGTTTGATGATGATTTATCATGCATTTTC AATGATGATAATGCGGATAAGCTTATCCTCCGTATCCGCATCACAAATGATGAAGCTCCA AAAGGAGAAATACAAGATGAGTCTGCTGAGGATGATGTCTTCCTAAAAAAGATAGAGGGC AATATGTTGACAGAGATGGCGCTTCGAGGCATTCCAGATATCAACAAAGTGTTCATCAAA GAAGGGAAGGTCAATACCTTCTATCAAGATGACGGTTTCAAAGCAGCTAATGAATGGATG CTTGATACAGAAGGTGTGAATCTTTTAGCTGTCATGTGTCACGAGGATGTTGATGCTACA AGGACAACAAGTAACCATCTGATTGAAGTGATTGAGGTACTTGGAATTGAGGCTGTCCGT CGATCTCTCTTGGATGAGCTTCGGGTGGTGATATCTTTCGATGGGTCATATGTGAACTAC CGGCATCTGGCCATTCTTTGTGATACAATGACATACAGAGGTCACTTGATGGCTATTACA AGGCATGGTATCAACCGCAACGACACTGGACCTCTTATGAGATGTTCCTTTGAAGAGACT GTTGACATCTTACTTGATGCTGCTGTATATGCTGAATCTGACCACCTGAGAGGTGTTACT GAAAACATAATGCTTGGTCAGCTTGCTCCTATTGGTACTGGAGGCTGTGCACTATATCTG AATGACCAGATGTTGCAGCAAGCAATTGAACTTCAACTCCCAAGCTATGTCGAAGGCCTA GACTTTGGCATGACTCCAGCACGATCACCCATCACTGGGACACCTTACCATGAAGGAATG ATGTCGCCAAGTTATCTGCTGAGTCCAAACATCAGGGCTTCGCCTATTAATACAGATGCT TCGTTCTCGCCGTATGTTGGGCACATGGCATTCTCACCATTCCCTTCACCAGGTGGTTAC TCCCCATCGTCAGGGGGATACAGCCCATCTTCTCCGGTTTTCACCCCAGAGAAAGGATAT AGCCCTCTCTCTCCATCATATAGCCCTGCATCACCAAGCTATAGTCCCACCTCACCGTCT TACACTCCTGGCTCTCCCACCTACAGTCCAACAAGCCCGAATTACTCCCCAACCAGCCCG ACGTACTCGCCTACCAGCCCATCGTACTCACCCACATCTCCGAGCTACAGCCCAACATCA CCAAGCTACAGCCCTACATCACCAAGCTACAGCCCTACATCTCCTAGCTATAGTCCTACA TCACCAAGCTACAGCCCCACCTCACCAGTTTATAGCCCAACCTCACCAGCATACAGCCCC ACATCACCCGCTTACAGCCCCACATCGCCATCCTACAGTCCAACTTCACCATCTTATAGC CCTACATCACCTTCATACAGCCCTACGTCCCCTTCATACAGCCCTACCTCCCCCTCATAC AGCCCTACCTCTCCCTCCTACAGCCCGACATCACCTGCTTACAGCCCGACATCACCAGGA TACAGCCCAACGTCACCGAGCTACAGCCCTACATCTCCGAGCTACAGTCCTACATCTCCG AGCTACAATCCTTCATCAGCCAAGTACAGCCCTTCACATGCATACTCTCCAAGCAGCCCC AGGATGAGTCCATACAGCCAGACTTCTCCAAGCTACAGTCCAACGTCACCGACTTACTCT CCTACATCACCATCATATTCACAACCAAGTCCATCGTACAGCCCAACGAGCCCGTTCAAC ACCTCTGGAGGACCCAGCCCAGACTACAGCCCGACCTCTCCAAATTACAGCCCTAGCGGA AGCTACTCCCCCACTGCACCGGGCTACTCCCCGTCGTCCACAGGCCAGGGTAATGACAAG GATGATAAGAGCGCTCGTTGA

Peptide Sequence

PEP ID	Zm00001d024583_P011
PEP Infomation	pep chromosome:B73_RefGen_v4:10:79179198:79184267:1 gene:Zm00001d024583 transcript:Zm00001d024583_T011 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA polymerase II large subunit family protein
Sequence	MSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIV SPQSNRPVMGIVQDTLLGCRKITKRDTLIEKDVFMNILMWWQDFDGKIPAPTILKPRPIW TGKQVFNLIIPKQINLIRFSAWHSEEEKGFITPGDTMVRIEKGELLSGTLCKKSLGTGSG SLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMETINDTISKAK NAVKELIKKAHEKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQNSLSESNNLKAMV TAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRG LTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFL YGEDGMDAVWIESQKLDSLKMKKPEFDNVFRYELDDENWRPNYMLPEHVDDLKTIREFRN VFEAEVQKLEADRYQLGSEITTTGDNSWPMPVNLKRLIWNAQKTFKIDFRRPSDMHPMEI VEAIDKLQERLKVVPGDDAMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTKEAFEWVI GEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIIN VAKKIKTPSLSVYLKPQVNQKKELAKNVQCALEYTTLRSVTHATEIWYDPDPLGTIIEED TEFVQSYYEMPDEDIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINREFDDDLSCIF NDDNADKLILRIRITNDEAPKGEIQDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIK EGKVNTFYQDDGFKAANEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVR RSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEET VDILLDAAVYAESDHLRGVTENIMLGQLAPIGTGGCALYLNDQMLQQAIELQLPSYVEGL DFGMTPARSPITGTPYHEGMMSPSYLLSPNIRASPINTDASFSPYVGHMAFSPFPSPGGY SPSSGGYSPSSPVFTPEKGYSPLSPSYSPASPSYSPTSPSYTPGSPTYSPTSPNYSPTSP TYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSP TSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPG YSPTSPSYSPTSPSYSPTSPSYNPSSAKYSPSHAYSPSSPRMSPYSQTSPSYSPTSPTYS PTSPSYSQPSPSYSPTSPFNTSGGPSPDYSPTSPNYSPSGSYSPTAPGYSPSSTGQGNDK DDKSAR

Transcript Sequence

Transcript ID	Zm00001d024583_T011
Transcript Infomation	cdna chromosome:B73_RefGen_v4:10:79179198:79184267:1 gene:Zm00001d024583 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA polymerase II large subunit family protein
Sequence	CCAGGTGGAGAGGCATCTCAATGATGGGGATTTTGTTCTTTTCAATCGGCAACCAAGTCT TCATAAAATGTCTATCATGGGGCATCGCATCAAAATTATGCCCTACTCAACTTTCCGGTT GAACTTGTCTGTCACTTCACCATACAATGCTGACTTCGACGGTGATGAGATGAATATGCA TGTCCCCCAGTCATTTGAGACCAGAGCAGAAGTTCTGGAGTTAATGATGGTGCCAAAATG CATTGTCTCTCCACAATCAAATAGGCCTGTAATGGGTATTGTCCAAGACACACTGCTTGG GTGTCGCAAAATTACTAAAAGGGACACTCTAATTGAAAAGGATGTATTTATGAACATCTT GATGTGGTGGCAAGATTTCGATGGAAAGATTCCTGCACCTACCATTTTGAAACCTAGGCC TATTTGGACTGGGAAACAAGTTTTTAACTTAATTATCCCCAAGCAAATAAATTTAATTCG GTTTTCAGCATGGCATTCGGAAGAAGAAAAAGGATTTATTACTCCCGGTGATACTATGGT CAGGATAGAGAAGGGAGAGCTTCTGTCTGGCACACTTTGCAAAAAGAGTCTTGGAACAGG CTCCGGAAGTCTTATCCATGTCATTTGGGAAGAGGTTGGTCCAGATGCTGCCCGGAAGTT CTTAGGACACACACAGTGGCTTGTAAACTACTGGCTTCTTCAAAATGGTTTCAGTATTGG AATTGGGGATACTATTGCAGATGCATCCACCATGGAAACAATTAATGATACAATATCTAA AGCTAAGAATGCTGTGAAGGAGCTTATTAAAAAAGCTCATGAGAAGCAGTTGGAAGCTGA GCCAGGACGCACTATGATGGAATCATTTGAAAACAGAGTGAACCAGGTTCTTAACAAAGC CCGTGATGATGCTGGTAGCAGTGCTCAGAATAGCTTGTCTGAAAGCAACAATTTGAAGGC TATGGTCACTGCAGGTTCAAAAGGCAGTTTCATTAACATTTCACAAATGACTGCTTGTGT GGGACAGCAGAATGTTGAGGGCAAGCGGATCCCTTTTGGTTTCATTGATCGGACGTTGCC ACATTTCACAAAAGATGACTATGGTCCTGAAAGTCGTGGATTTGTGGAAAATTCTTACCT CCGAGGTCTGACACCGCAAGAATTTTTCTTTCACGCTATGGGTGGTAGGGAAGGTCTTAT AGACACTGCTGTGAAAACCTCTGAGACTGGGTATATCCAGAGGAGACTTGTGAAAGCTAT GGAGGACATCATGGTTAAATATGATGGTACTGTAAGAAATTCTCTTGGAGATGTCATCCA GTTCTTGTATGGAGAAGATGGCATGGATGCTGTTTGGATTGAATCTCAAAAATTGGACTC ATTGAAGATGAAGAAGCCTGAGTTCGATAATGTATTCCGTTATGAGCTGGATGATGAGAA TTGGAGACCTAACTACATGCTACCTGAACATGTTGACGATTTGAAGACCATACGTGAATT CAGAAATGTGTTCGAGGCAGAGGTTCAAAAGCTAGAAGCTGATCGGTACCAGCTTGGGTC TGAGATCACCACAACTGGTGACAATTCGTGGCCTATGCCTGTGAACCTCAAGCGACTCAT CTGGAATGCTCAGAAGACATTCAAGATTGATTTTAGAAGACCTTCTGACATGCACCCGAT GGAAATTGTGGAAGCGATAGATAAACTGCAAGAAAGACTTAAGGTTGTACCTGGTGATGA TGCTATGAGCATTGAGGCCCAGAAGAATGCAACCTTGTTCTTTAATATCCTACTTCGTAG CACGTTTGCTAGCAAGAGGGTCTTGAAGGAATACAGGCTTACAAAGGAAGCTTTTGAATG GGTTATTGGTGAGATTGAATCGAGGTTTCTTCAGTCTTTGGTGGCCCCTGGCGAGATGAT TGGATGTGTGGCTGCACAATCTATTGGAGAACCAGCAACTCAGATGACCCTGAATACCTT CCATTATGCTGGTGTCAGTGCCAAGAATGTCACCCTTGGAGTTCCCAGGTTGAGGGAGAT CATTAATGTTGCCAAGAAGATAAAGACACCATCTTTGTCTGTTTACCTGAAGCCTCAGGT GAACCAGAAGAAAGAATTGGCTAAGAATGTCCAGTGTGCTTTGGAGTACACTACACTGCG TAGTGTTACCCACGCCACAGAGATATGGTATGATCCTGATCCTCTAGGGACCATCATTGA AGAGGACACAGAGTTTGTTCAGTCCTATTATGAAATGCCTGATGAGGACATTGACCCGGA TAAAATTTCTCCTTGGTTGCTGCGTATTGAGCTTAACCGTGAGATGATGGTTGATAAGAA GTTGAGCATGGCTGATATTGCCGAGAAGATTAACCGTGAGTTTGATGATGATTTATCATG CATTTTCAATGATGATAATGCGGATAAGCTTATCCTCCGTATCCGCATCACAAATGATGA AGCTCCAAAAGGAGAAATACAAGATGAGTCTGCTGAGGATGATGTCTTCCTAAAAAAGAT AGAGGGCAATATGTTGACAGAGATGGCGCTTCGAGGCATTCCAGATATCAACAAAGTGTT CATCAAAGAAGGGAAGGTCAATACCTTCTATCAAGATGACGGTTTCAAAGCAGCTAATGA ATGGATGCTTGATACAGAAGGTGTGAATCTTTTAGCTGTCATGTGTCACGAGGATGTTGA TGCTACAAGGACAACAAGTAACCATCTGATTGAAGTGATTGAGGTACTTGGAATTGAGGC TGTCCGTCGATCTCTCTTGGATGAGCTTCGGGTGGTGATATCTTTCGATGGGTCATATGT GAACTACCGGCATCTGGCCATTCTTTGTGATACAATGACATACAGAGGTCACTTGATGGC TATTACAAGGCATGGTATCAACCGCAACGACACTGGACCTCTTATGAGATGTTCCTTTGA AGAGACTGTTGACATCTTACTTGATGCTGCTGTATATGCTGAATCTGACCACCTGAGAGG TGTTACTGAAAACATAATGCTTGGTCAGCTTGCTCCTATTGGTACTGGAGGCTGTGCACT ATATCTGAATGACCAGATGTTGCAGCAAGCAATTGAACTTCAACTCCCAAGCTATGTCGA AGGCCTAGACTTTGGCATGACTCCAGCACGATCACCCATCACTGGGACACCTTACCATGA AGGAATGATGTCGCCAAGTTATCTGCTGAGTCCAAACATCAGGGCTTCGCCTATTAATAC AGATGCTTCGTTCTCGCCGTATGTTGGGCACATGGCATTCTCACCATTCCCTTCACCAGG TGGTTACTCCCCATCGTCAGGGGGATACAGCCCATCTTCTCCGGTTTTCACCCCAGAGAA AGGATATAGCCCTCTCTCTCCATCATATAGCCCTGCATCACCAAGCTATAGTCCCACCTC ACCGTCTTACACTCCTGGCTCTCCCACCTACAGTCCAACAAGCCCGAATTACTCCCCAAC CAGCCCGACGTACTCGCCTACCAGCCCATCGTACTCACCCACATCTCCGAGCTACAGCCC AACATCACCAAGCTACAGCCCTACATCACCAAGCTACAGCCCTACATCTCCTAGCTATAG TCCTACATCACCAAGCTACAGCCCCACCTCACCAGTTTATAGCCCAACCTCACCAGCATA CAGCCCCACATCACCCGCTTACAGCCCCACATCGCCATCCTACAGTCCAACTTCACCATC TTATAGCCCTACATCACCTTCATACAGCCCTACGTCCCCTTCATACAGCCCTACCTCCCC CTCATACAGCCCTACCTCTCCCTCCTACAGCCCGACATCACCTGCTTACAGCCCGACATC ACCAGGATACAGCCCAACGTCACCGAGCTACAGCCCTACATCTCCGAGCTACAGTCCTAC ATCTCCGAGCTACAATCCTTCATCAGCCAAGTACAGCCCTTCACATGCATACTCTCCAAG CAGCCCCAGGATGAGTCCATACAGCCAGACTTCTCCAAGCTACAGTCCAACGTCACCGAC TTACTCTCCTACATCACCATCATATTCACAACCAAGTCCATCGTACAGCCCAACGAGCCC GTTCAACACCTCTGGAGGACCCAGCCCAGACTACAGCCCGACCTCTCCAAATTACAGCCC TAGCGGAAGCTACTCCCCCACTGCACCGGGCTACTCCCCGTCGTCCACAGGCCAGGGTAA TGACAAGGATGATAAGAGCGCTCGTTGAAGAGGCACAGGAGAACAAGGCGCTCTAGAGCA CTCGATGAAGGCACTCGGTGATGGCCACATGGGAAGATCGAGGCACTTTTTTTTCCCTTG AGTTTTTGTATGGTTGATGAACTCTGAGAGCAAACTTGTATTTTTCCGAGCTGCTAATAG CAGAAATAGTTGTTTATGTATGATACTAGAACTAAGGACTGGACTGTGCTGCGACTTGAT AAGTGGTTAACCGCGTGGTCGCCCCTCAGAGAGTAACACATGTAGTAATGTTTAATGATA ATATCGTGACTGTACTTGGTAC