Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d024567_T017
CDS Infomation	cds chromosome:B73_RefGen_v4:10:78539304:78549021:1 gene:Zm00001d024567 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein PAF1 homolog
Sequence	ATGGCGTCTTACAGGCCGTACGCACCGCCGCCTCCGCAGGGCAGCTACCCGCCGCAGATG AATCCGTACGCGCCGCCGCAGGCGCCCTACAACAGGATGCCGGCGCCGCCCTACCACGCT GGGCCCCCGCCCCCGCCGCCACCCGGTCCGCCACCACCTCACCAACCGCAGTTCAATTTC GGTCCCGGGCCTCCGCAGCAGCACCCGCCCCCGCCGATGTACTACCAGCCACCGCCACCA CCCTATGGCGGGAACAGTAACCCGCCTCCTCCTCCTCCTTCAGCGCCACCCCCGCCTCCG TCCCCACCCCCTGCTGCTCCACCCCCTCCGCCTCCGGCCCAGGCACCGTCTGCTCAGGCC CTGCTGCCCTCAAAGGAGCAGCAGCCTAAGGCAACGCTGCCAAGAGAGGAGACGGAGGAG GAGCGTCGTGCACGGAAGAAGCGGGAGTTCGAGAAGCAGCGGGTGGAGGAACGCAAGCAG CAGCAGATGATGCGGCAGACGCAGGCCACCATTCTGCAGAAGACGCAGCAGGTGCGTGCT TCTCAGCAGCAGCCGCAGAGCCGCCACCACCACCACCAGCCTCCGAGTATCTTCCGGGCA GCAGCAATTGGCTCTCGGGCAGTGGCAACTGGGTCTCGCCCAGCATCAGCGCCGAATGCT GAGAGGTTTGAGAACCGGTTAAAAAAGCCAACAACGTTCCTCTGCAAGCACAAATTTAGG AATGAACTCCCAGATCCAAGTGCTCAGTTGAAATGGCTACCCTTGAATAAGGATAAGGAC CGATATACCAAATACAGGATAACTTCATTGGAGAAAAACTACATTCCTAAAATGATTGTC CCTGAGGATCTTGGGATACCTCTTGATCTACTTGACATGAGTGTATACAATCCCCGGGAT GTTCAGTCGCGCATGGCTCCTGAAGATGAAGAGCTATTGCGTGATGATGAGGTCCTCACC CCTATTAAACAAGAAGGTACAAGGAAAAGGGAGAGGCCCACTGACAAAGGTGTTTCTTGG CTGGTCAAAACACAATACATATCTCCACTAAGTACTGATGCAACCAAAATGTCCCTTACT GAGAAGCAAGCAAAGGAAAGGCGAGAAACAAGGGAGGGTCGCAATGCTTTCCTAGACAAT CTTAATGATAGAGAGAAACAGATCAAAGCCATTGAAGAATCCTTCAGAGCAGCCAAGTCA AGGCCTGTTCACCAGACTAAACGTGGCATGCAAGCTGAGTGGGTTATGCCTTTGCTACCT GATTTTGATAGGTACGAGGAGCCGTTTGTTATGGTGAATTTTGATGGCGATCCAACTGCT GATTCTGAGCAGTACAACAAACTTGAGAGACCTGTACGTGATGAATGTGAATCCCGGGCT GTGATGAAAAGTTTTAGTGTCAGTGGTTCAGACCCTTCAAAACAGGAGAAGTTTTTGGCA TACATGGCCCCAGCACCCCATGAGCTCGCCAGAGACTTGGATGATGAAAACGATGATATC CAGTATTCCTGGCTAAGAGAATATCACTGGGAAGTGAGAGGAGATGATAAAGATGATCCT ACAACATACCTTGTCACATTTGATAAGGAGGAGGGTGCAAAATATTTGCCTCTCCCTACT AAGCTAGTTTTGCAGAAGAAGAAGGCGAAGGAGGGGAGGTCTGGGGATGAAATTGAGCAT TTTCCAGTACCTTCCCTTATTACTGTGAACAAAACAGGTCATGTTGGTACCATGGAGCGC GGAGAATCTTCTGGCATGCATGTATGGTTCGGACTTCCTTATTATTTGTTATAA

Peptide Sequence

PEP ID	Zm00001d024567_P017
PEP Infomation	pep chromosome:B73_RefGen_v4:10:78539304:78549021:1 gene:Zm00001d024567 transcript:Zm00001d024567_T017 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein PAF1 homolog
Sequence	MASYRPYAPPPPQGSYPPQMNPYAPPQAPYNRMPAPPYHAGPPPPPPPGPPPPHQPQFNF GPGPPQQHPPPPMYYQPPPPPYGGNSNPPPPPPSAPPPPPSPPPAAPPPPPPAQAPSAQA LLPSKEQQPKATLPREETEEERRARKKREFEKQRVEERKQQQMMRQTQATILQKTQQVRA SQQQPQSRHHHHQPPSIFRAAAIGSRAVATGSRPASAPNAERFENRLKKPTTFLCKHKFR NELPDPSAQLKWLPLNKDKDRYTKYRITSLEKNYIPKMIVPEDLGIPLDLLDMSVYNPRD VQSRMAPEDEELLRDDEVLTPIKQEGTRKRERPTDKGVSWLVKTQYISPLSTDATKMSLT EKQAKERRETREGRNAFLDNLNDREKQIKAIEESFRAAKSRPVHQTKRGMQAEWVMPLLP DFDRYEEPFVMVNFDGDPTADSEQYNKLERPVRDECESRAVMKSFSVSGSDPSKQEKFLA YMAPAPHELARDLDDENDDIQYSWLREYHWEVRGDDKDDPTTYLVTFDKEEGAKYLPLPT KLVLQKKKAKEGRSGDEIEHFPVPSLITVNKTGHVGTMERGESSGMHVWFGLPYYLL

Transcript Sequence

Transcript ID	Zm00001d024567_T017
Transcript Infomation	cdna chromosome:B73_RefGen_v4:10:78539304:78549021:1 gene:Zm00001d024567 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein PAF1 homolog
Sequence	GCTCCTCGCCAAATCGCCGAGACGCCGACTACCTCGCGCTCCCATAGATCTGGTAGAATA GGTGCCGGTGGCCTCGGACGTGCAGTGGTAGAGGCTTCTGCGGTGGCGGCGACGGAGGAG AAGGGGGAGCGAGCAGTGTCCGCGGGGCGCGGTGTCTGTGTGCTGGGGCTCGGGTTCCGA GGAACCCTAGCCGCCGCGCGATGGCGTCTTACAGGCCGTACGCACCGCCGCCTCCGCAGG GCAGCTACCCGCCGCAGATGAATCCGTACGCGCCGCCGCAGGCGCCCTACAACAGGATGC CGGCGCCGCCCTACCACGCTGGGCCCCCGCCCCCGCCGCCACCCGGTCCGCCACCACCTC ACCAACCGCAGTTCAATTTCGGTCCCGGGCCTCCGCAGCAGCACCCGCCCCCGCCGATGT ACTACCAGCCACCGCCACCACCCTATGGCGGGAACAGTAACCCGCCTCCTCCTCCTCCTT CAGCGCCACCCCCGCCTCCGTCCCCACCCCCTGCTGCTCCACCCCCTCCGCCTCCGGCCC AGGCACCGTCTGCTCAGGCCCTGCTGCCCTCAAAGGAGCAGCAGCCTAAGGCAACGCTGC CAAGAGAGGAGACGGAGGAGGAGCGTCGTGCACGGAAGAAGCGGGAGTTCGAGAAGCAGC GGGTGGAGGAACGCAAGCAGCAGCAGATGATGCGGCAGACGCAGGCCACCATTCTGCAGA AGACGCAGCAGGTGCGTGCTTCTCAGCAGCAGCCGCAGAGCCGCCACCACCACCACCAGC CTCCGAGTATCTTCCGGGCAGCAGCAATTGGCTCTCGGGCAGTGGCAACTGGGTCTCGCC CAGCATCAGCGCCGAATGCTGAGAGGTTTGAGAACCGGTTAAAAAAGCCAACAACGTTCC TCTGCAAGCACAAATTTAGGAATGAACTCCCAGATCCAAGTGCTCAGTTGAAATGGCTAC CCTTGAATAAGGATAAGGACCGATATACCAAATACAGGATAACTTCATTGGAGAAAAACT ACATTCCTAAAATGATTGTCCCTGAGGATCTTGGGATACCTCTTGATCTACTTGACATGA GTGTATACAATCCCCGGGATGTTCAGTCGCGCATGGCTCCTGAAGATGAAGAGCTATTGC GTGATGATGAGGTCCTCACCCCTATTAAACAAGAAGGTACAAGGAAAAGGGAGAGGCCCA CTGACAAAGGTGTTTCTTGGCTGGTCAAAACACAATACATATCTCCACTAAGTACTGATG CAACCAAAATGTCCCTTACTGAGAAGCAAGCAAAGGAAAGGCGAGAAACAAGGGAGGGTC GCAATGCTTTCCTAGACAATCTTAATGATAGAGAGAAACAGATCAAAGCCATTGAAGAAT CCTTCAGAGCAGCCAAGTCAAGGCCTGTTCACCAGACTAAACGTGGCATGCAAGCTGAGT GGGTTATGCCTTTGCTACCTGATTTTGATAGGTACGAGGAGCCGTTTGTTATGGTGAATT TTGATGGCGATCCAACTGCTGATTCTGAGCAGTACAACAAACTTGAGAGACCTGTACGTG ATGAATGTGAATCCCGGGCTGTGATGAAAAGTTTTAGTGTCAGTGGTTCAGACCCTTCAA AACAGGAGAAGTTTTTGGCATACATGGCCCCAGCACCCCATGAGCTCGCCAGAGACTTGG ATGATGAAAACGATGATATCCAGTATTCCTGGCTAAGAGAATATCACTGGGAAGTGAGAG GAGATGATAAAGATGATCCTACAACATACCTTGTCACATTTGATAAGGAGGAGGGTGCAA AATATTTGCCTCTCCCTACTAAGCTAGTTTTGCAGAAGAAGAAGGCGAAGGAGGGGAGGT CTGGGGATGAAATTGAGCATTTTCCAGTACCTTCCCTTATTACTGTGAACAAAACAGGTC ATGTTGGTACCATGGAGCGCGGAGAATCTTCTGGCATGCATGTATGGTTCGGACTTCCTT ATTATTTGTTATAAAATCTATTTTAGCTAAAATTTGAACAAAACCAGCTATCTTTCTGTA AGTAGATGTAAGCATTCTATCTTCTCTCCAAACCTTAGGTTTGCTTCCTTGACTTCTTGC TACTAATTAACATGGTTTTTTTACAATCACACTTTCTGGTATCACTATATTAGGACATTT CATGCTTTATATTTGTTTTTTTTGTCATAATTTTACACGAGAGCACATTGCTAAGAAAAA AACCTGACGACCATACACCCTTATTGAATATTGCTCTCTTCCTTCCTCATTAAAATTTGC CTATTAAACTATTCATTGTTGAATAGTGACCTCTGACAAAGGGATGGATTCTTAATGTAA CACACATTGAATGAGATGTAACACTTTATGCAAATGTACTTTTGCTTCCCACAAAATCCT ACAGTGCTGATAAAAACAAAATTCATTACCACTCCACATGAAATGAAAGGCAATGAAATC AGTTGTTTTTCATACCTGTACCCTTCACCTCAAAGTTTTCTTCCTTGTAGGTGAATTCAA AGCCACGGAGACCTCATGTTGATGATGATCTTGATGAGCATTCAAAGCGTTCTAGGGTAG AAGATATTGACCAATATAGTGGAGAAGAATATTCTGAGTGATGAACTGTAAATCATAATT ATCTTGCACCAACGAATTTTATCAGTACATGTGAAGCCTTAAAAGGTTTCAAGCAATAGG CACAAGTGGTTTCATGGTGCATGGTCATGCAGTGAAAGAAAATGTCTGACAACAAGAGGA CATTGGGGCTTGGCCAATTTGTTGATCTCTGTAGTGATAATAGAAAGCGTCACATTGTTC TAAAGAAGTTGTCTTCAAAGTCTTGGATGATGCGTATATTGCAGTTGCTCCACATGTTCC AGGATAGTGAAATTTTATTCATGGTTGCCTGATAAAGTGTGGAATTATATAAATTTTCAG CATAAATTGTTTTATTATTAACGTTCGTTTTTGCCTAAAATAATGCATAAGTATATGAGA TGATAAAAGGGTAATCATGAAGCATTCTGTGGTCCGGTGGCCCTTAAGTTGCAATTCTAT TCCAGCACAAAGTGACAATGATATGATGACTTTTGGTCTGGTATTATTAATTCTGGACAG TAATTCAGTAGCTGTGGTAACGGCAAAATACCTCAGGGTTAAGCTGGCATGCAGGTTATT ACACTTGGTTTCCATTGCTGTGTGATTGTGTTTGCCTTAGCTTTGACACTTAAATATTAC GTAGGTTACTGTTTTCATTTTATGTAGCCTGGAGGACCATTTTCTGCTGGCAGCCAGGTA TTCTTTTTATCCACATTCCATTTTCTAATGTATCATATAGTAGTTTTATGTTTGAAAATT TTCATCTGTTGTTAGGTTTGGCTGAGTTTTATGGATGCTAAGATATGGTTCCCCTCAAGT GACAGCATTGTATTGTGGTATGTCTGACATCTTGTACACTAATGCCATCAGCAATCATTT TGGGCTTCATGTCTGATGTTAGTTGTTGACATCATAACTCATGGAATGTTGCAAAGGAAT GATGCTGTAGCTGTAGCTGTAATGTGAACGGACTGTAATTCACAAATTTCTTGATTTGTT TTACATAGGATGTCCATATGCTCTTTAATAGACCTTTACCAGTTGTTTACTACAGGTTCT TTCAATCCCTGCATTATACAGTCTTTTGTGATACATGTTACATCCTGTGTAGTTCTTCAA CTCCTTATGATTTATAGAATATTTCAATTTTAGATTCTTAAAATACTGTTTGCTTTATCT ATACTCTTGTGGATTTGTTTTACAGTCATCCGATTAGTTTTGTAAACATTCATGTTTTTC TAATTACCAGGTAGCATGTCCTTGAGTAACTTATTAAGCAGTTCAATTTGTCTGCTGATA GTTATGGTATAGTCAAAGTTGGCAGGCTGCCAACAACATAACTCCAATTTCCATTCTTTT TAGTCCTGGCTGATCTATACTGCATGTACTTCTATTTCCATTCTGGATTTAGCATCTGGA ATATAGGATTGTTTCAATGCAACAGTCTCGCTAGTGCTTATTGACCTTTCAGTTGCTCTA CATGTTTCTGATTGGGATCATCCCAGCTGGGAAGAGAGTCCGAATCATATCTCTAGATCT GTGTCTGCTTGTCCCGTCAATTTGTGATTACCTGTTCAATTCATGTGTCTATTAAAGCTT GATGCCAGTGCCCTTAAAACAAACGTGTTGCTACGCATGTTGTTGGTGCTATTAAAAAAT AGTTTTGGTGTGTGACCTAGCTTGTTGTCATGCGCCTGTGGTTTGAAGAACGTTATGCTG TTGTATGGGCAATGTTTGCGTAATGCCCAGGGGAACGGTGCCAATTGCTGGAACAAATTC GGGTAAGGTGACGTGGTGAGCTGCTGTCTGTAGTGTGTGGACAACTGCAGTAGTACCATG GTTCACAGGCAGTGACAAGCTTCTTAAGCATACAAACGAAGGAAGATAGACACAACCTAA CAAGGCGCTGCCAGTTTTCTCCACTACAAATTATTGACCAGACTTGGACGTTAGGGTGTC GCACCATTGACAAGCCATGCGAATGAGATGAAGGTGATGATGATGAGGGGTGGTCACTTG TACAGTCATCCTGCTATATATGCCTTTCGCCCCCCATGGAGCTAGCTGATAGACATGCCG TCCTAGTTTGCTCGTGTGTACACAGCTGGGAGGGAGCTATTATATTTAGTGGATCGGGTC AGGGTTGAACTTGAGAGACTCCTTCCAGATGAGCTCCTTTATAGCTTCTTCGGTGAGCGA TGGCTGCTCGAAGTCGAAGCTGAAAGGCGCCGGACAGATGGGCTCGTCGTTTACCTCGTG AAGGGACGCCAGGTATGGGTGGCACAGAGCCTCATCAACTGCGATATGATTCCACGGAAG GAAAAGCAACAACAAGTAATCCTCTTGCTGGGATCGAACACGAGCATCCTCTCAAGCAAG TCCATGGCGCCGCTAGACATGGTGGGGAACCGCACGCGGAACTGTTGCTTGGGATGCTGA GGCAGGGACCTCACGTATCTGCGGGCGTGGTCGCTCCGGAGGAACCCGAGGCTGGTGTCG TCAGGAAACAGGGGCTCTCTGGTGACCATCTCGCCGAAGATGCAGCCCACGGACCACATG TCGATGGCCTGGGTGTACTCGGAGCAGTTGAGCAGGAGCTCAGGCGCCCTGTACCACCGC GTGACGACGTACTCCATCATGAAGTCGGTCTCCGTCGTGGTCCTCGCCAGCCCGAAGTCC CCGATCTTCAGGTCGCACTTGGCGTTCAGCAGCATGTTGCTCGGCCTCAGGTCCCTGTGC AGGACGTTCGCCGAGTGCACGTACTTGAGCCCGCGGAGCAGCTGGTACACGAAGTACTGC ACCGGCCGGTCGTCGTAAAAGAAGAAAGAAAAAAAAAGGGTTAGGAACAGAGAACAGAGG ACGGCACAGCAACAGCGTTGGATTTGGATCGACGACCTGGCAGTGGTCGTCGGTTAGTTG CTGGTTTGACCGTAGGAGGTGGTGAAGGTCAGTGTCCATCAGCTCGTAGACGATGTAGAC GTCGTTGAAGTTCTCCCTCCTGGGCGGGCGTATGATGTCCTTTATTGAAATGACCTGCAG GGAAAAAGAATTTGTTGCTCTGTTACATATATGCACGGATGTATTATGTATATAGCTAAT GAACTATACATACATGTATATATAGCTAATAAATACATACAATGACAAAAAAAAGTCCTG TAGCGTGGAGTATATATATAAATATATATGTTCATCACAAGGTAGAGAAATAT