Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d024541_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:10:77459850:77461526:1 gene:Zm00001d024541 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative FAD-binding Berberine family protein
Sequence	ATGGCGGCCCTCGCCCTGCTCCCTCTCGTGCTCCGCCTCTTCGCCGTGCAAGCAGGCGGC AGAGTCGACGGACGCTTCACGGCGTGCCTGGCCGCCGCCGGCGTGGGCAACGTGACGACG CGGCAGTCCCCCGGGTACGCCGCGGCGCTGCTCGTCTCCGTGCAGAACCTGCGGTTCGCG GGCGCGGGCGCGCCCAAGCCCGCGGCCGTGGTGGTCCCGGCGTCGCTGCAGGAGCTTTGC GACGCGGTGCGGTGCGCGCGGGGGGCGGGGCTGGCGCTGCGGCTCCGCAGCGGCGGGCAC AGCTACGAGGGGCAGTCCTACACGACCTCGGACGGCGGCGGCGCGTTCGCCGTGGTGGAC CTAGCGGCGCTGGACCGCGTGCGCGTGGACGCGGCGCGGCGCACGGCGTGGGTGCAGGCC GGCGCGACGCTGGGGCAGGCGTACCGCGCCGTGGCGGCGGCCAGCCCGGCGCTGGCATTA TCGGCGGGGTCGTGCCCGACGGTCGGCTCGGGCGGGCACATCGCCGGCGGGGGGTTCGGG CTGCTGTCGCGCAAGCACGGCCTGGCGGGGGACAACGTGGTGGACGCCGTGCTGGTGGAC GCGCGCGGCCGCGTCCTCGACCGCGCCGCCATGGGGGAGGACGTGTTCTGGGCCATCCGC GGCGGCGGCGGCGGCGCCTGGGGCGCCGTGTACGCCTGGCGCGTCCGCCTCAGCCCGGTC CCCGAGCGCGTCACCGCGTTCGTCGTCAACCGCCCAGGCCCCGCCCGCTCCGTCGCCTCG CTGGTGTCCACGTGGCAGCACGTCGCGCCGTGGCTGCCCGACGAGTTCTACGTCTCCGCG TTCGTCGGCGCCGGGCTGCCGGAGGCGGACCCGGGCCGCCGGGCCGCCGGCGTCTCCGTC ACGTTCAAGGGGCTGTACCTCGGGCCGGCGCACGAGGCGATGCAGATCCTGGCGGCCCGG TTCCCGGAGATCGGGCTGTCCGACCTGGCCCCGAGGGAGATGAGCTGGATCGAGTCCGTG GTGTTCTTCTCCGGCCTGCCCGAGGGGAGCGCCGTGTCGGACCTCGCGGACCGGGTGCTG CACACCAAGACCTACTTCAAGGCAAAGTCGGACTACGTGCGGCGTCCGACGCCGCTAGAC CACCTGGTCAAAGCCGTCGGCCTGCTGTCCGAGCAGCCCAAGGCGTACGTCATCCTGGAC CCGTACGGCGGCGCCATGGACCGGGTCGGGTCCGCCGTCCTCCCCTTCCCGCACCGCAAG GGCAACATCCACGGCATCCAGTACATGGTCGAGTGGACGGCCGGCGACGACGAGCGCAGG GAGGAGTACATGGGCTGGCTGCGCCGGTTCTACGACTTCATGGGAGCGTACGTGGCGACG GAGCCACGGGCCGCGTACGTAAACTACATGGACCTCGATCTCGGAACGAACGACTGGTCC GACGCCGACGAGAGGAGCCCCAACCCACAGGTGGAGGCGGCGCGGGCGTGGGGCGAGCGG TACTTCCTGGGCAACTACGACCGGCTGGTTCGAGCCAAGACGTTGATCGACCCGGACAAC GTGTTCCGCAACGCGCAGAGTATCCCGCCACTTGGAGGCGGCGCCCATGGCATGACGTGG AGCACGCGTGGCATCTCGCCCAAGGCCACATCCAATGGAAGCACGTATGATATATAG

Peptide Sequence

PEP ID	Zm00001d024541_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:10:77459850:77461526:1 gene:Zm00001d024541 transcript:Zm00001d024541_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative FAD-binding Berberine family protein
Sequence	MAALALLPLVLRLFAVQAGGRVDGRFTACLAAAGVGNVTTRQSPGYAAALLVSVQNLRFA GAGAPKPAAVVVPASLQELCDAVRCARGAGLALRLRSGGHSYEGQSYTTSDGGGAFAVVD LAALDRVRVDAARRTAWVQAGATLGQAYRAVAAASPALALSAGSCPTVGSGGHIAGGGFG LLSRKHGLAGDNVVDAVLVDARGRVLDRAAMGEDVFWAIRGGGGGAWGAVYAWRVRLSPV PERVTAFVVNRPGPARSVASLVSTWQHVAPWLPDEFYVSAFVGAGLPEADPGRRAAGVSV TFKGLYLGPAHEAMQILAARFPEIGLSDLAPREMSWIESVVFFSGLPEGSAVSDLADRVL HTKTYFKAKSDYVRRPTPLDHLVKAVGLLSEQPKAYVILDPYGGAMDRVGSAVLPFPHRK GNIHGIQYMVEWTAGDDERREEYMGWLRRFYDFMGAYVATEPRAAYVNYMDLDLGTNDWS DADERSPNPQVEAARAWGERYFLGNYDRLVRAKTLIDPDNVFRNAQSIPPLGGGAHGMTW STRGISPKATSNGSTYDI

Transcript Sequence

Transcript ID	Zm00001d024541_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:10:77459850:77461526:1 gene:Zm00001d024541 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative FAD-binding Berberine family protein
Sequence	ATGGCGGCCCTCGCCCTGCTCCCTCTCGTGCTCCGCCTCTTCGCCGTGCAAGCAGGCGGC AGAGTCGACGGACGCTTCACGGCGTGCCTGGCCGCCGCCGGCGTGGGCAACGTGACGACG CGGCAGTCCCCCGGGTACGCCGCGGCGCTGCTCGTCTCCGTGCAGAACCTGCGGTTCGCG GGCGCGGGCGCGCCCAAGCCCGCGGCCGTGGTGGTCCCGGCGTCGCTGCAGGAGCTTTGC GACGCGGTGCGGTGCGCGCGGGGGGCGGGGCTGGCGCTGCGGCTCCGCAGCGGCGGGCAC AGCTACGAGGGGCAGTCCTACACGACCTCGGACGGCGGCGGCGCGTTCGCCGTGGTGGAC CTAGCGGCGCTGGACCGCGTGCGCGTGGACGCGGCGCGGCGCACGGCGTGGGTGCAGGCC GGCGCGACGCTGGGGCAGGCGTACCGCGCCGTGGCGGCGGCCAGCCCGGCGCTGGCATTA TCGGCGGGGTCGTGCCCGACGGTCGGCTCGGGCGGGCACATCGCCGGCGGGGGGTTCGGG CTGCTGTCGCGCAAGCACGGCCTGGCGGGGGACAACGTGGTGGACGCCGTGCTGGTGGAC GCGCGCGGCCGCGTCCTCGACCGCGCCGCCATGGGGGAGGACGTGTTCTGGGCCATCCGC GGCGGCGGCGGCGGCGCCTGGGGCGCCGTGTACGCCTGGCGCGTCCGCCTCAGCCCGGTC CCCGAGCGCGTCACCGCGTTCGTCGTCAACCGCCCAGGCCCCGCCCGCTCCGTCGCCTCG CTGGTGTCCACGTGGCAGCACGTCGCGCCGTGGCTGCCCGACGAGTTCTACGTCTCCGCG TTCGTCGGCGCCGGGCTGCCGGAGGCGGACCCGGGCCGCCGGGCCGCCGGCGTCTCCGTC ACGTTCAAGGGGCTGTACCTCGGGCCGGCGCACGAGGCGATGCAGATCCTGGCGGCCCGG TTCCCGGAGATCGGGCTGTCCGACCTGGCCCCGAGGGAGATGAGCTGGATCGAGTCCGTG GTGTTCTTCTCCGGCCTGCCCGAGGGGAGCGCCGTGTCGGACCTCGCGGACCGGGTGCTG CACACCAAGACCTACTTCAAGGCAAAGTCGGACTACGTGCGGCGTCCGACGCCGCTAGAC CACCTGGTCAAAGCCGTCGGCCTGCTGTCCGAGCAGCCCAAGGCGTACGTCATCCTGGAC CCGTACGGCGGCGCCATGGACCGGGTCGGGTCCGCCGTCCTCCCCTTCCCGCACCGCAAG GGCAACATCCACGGCATCCAGTACATGGTCGAGTGGACGGCCGGCGACGACGAGCGCAGG GAGGAGTACATGGGCTGGCTGCGCCGGTTCTACGACTTCATGGGAGCGTACGTGGCGACG GAGCCACGGGCCGCGTACGTAAACTACATGGACCTCGATCTCGGAACGAACGACTGGTCC GACGCCGACGAGAGGAGCCCCAACCCACAGGTGGAGGCGGCGCGGGCGTGGGGCGAGCGG TACTTCCTGGGCAACTACGACCGGCTGGTTCGAGCCAAGACGTTGATCGACCCGGACAAC GTGTTCCGCAACGCGCAGAGTATCCCGCCACTTGGAGGCGGCGCCCATGGCATGACGTGG AGCACGCGTGGCATCTCGCCCAAGGCCACATCCAATGGAAGCACGTATGATATATAG